Gossypium arboreum (tree cotton): 108455111
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Entry
108455111 CDS
T05776
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108455111
03400 DNA repair and recombination proteins [BR:
gab03400
]
108455111
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108455111
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
108455111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
CARD_2
Motif
Other DBs
NCBI-GeneID:
108455111
NCBI-ProteinID:
XP_052878142
LinkDB
All DBs
Position
11:complement(1463562..1473997)
Genome browser
AA seq
1590 aa
AA seq
DB search
MENKDHFKGLKRRLAFDDEDSDQVLRFKVLLPNGTSVGLALKNTESEISFQGFIELIKDT
YDMVKRQSGSFKRKRMIDWKNEKLCLEDINGVKTRSRIDLRCFKQHKCHILKLHDGSGKF
ANTFENMWDLTPDTDLLMELPEEYTFETALADLIDNSLQAVWLNDVNHRRLISVAVLESG
ISIFDTGPGMDNSDENSIVKWGKMGASLNRLYKQQAIGCKPPFLVPFFGMFGYGGPIASM
HLGSCVEVSSKTKQSKKVYKLRLAREALLGNSGSECSWSTDGGIRDPLDEEIKESPHGSF
TKVVILNPVVKNLDISKLQCKLKDIYFPYIQCDELSNVGRTITPVGFQVNGLDLTEIQGG
EIATTNLHSCNGPEFTLLMRFSLKKEKISTSASGSRAPQIANARLKCIYFPIRQGKENIE
RILESLDAEGCGVGENFENYSRVSIRRLGRLLPDARWAILPFMDFRQRKGDQSHLLKRCC
LRVKCFVETDAGFNPMPSKTDLAHHSPFSIALRNFGNRPQDKEKDVEIEIHRDGKQLTPV
QLEREYREWLLLMHHRYDEEIDSGEDPPVLIVNPLNKKALGISSDVIRVHQALKRKELLW
KSGQKIKVLKGAYAGCYKNNVYATIEYFLIEGFEGDSGGEARIICRPLGTENGCELSVKG
GTPNLNIQDSLSLPISVIDSGKCIAINDSDWERQLEKHNQKTPSRIDLLNVKQCHWLGID
GAFPTSLTIPAGQTPPDDIVAVFRPSSFEVSKVSNYLDQKDIVKTNLEMLMKVQYRTENH
RDAKQINSLRIAPSSFKGFHGLYKFPLGVKFPHLFKKAGAYTFSFSSEHSRCQNYNLTIT
VVPSEKVGKWQLLGDTRFPSYSVRVGSCFPPFSIACYDIYDNRMSFTSIPDLKITLGMNE
YLSVDVVKMKPSLSSDKLAIVIEDVMVETNGLDSIRPNYAATLMIYIQDESTSIPLECQV
TPGALHRIEVSSQLPGKQLLPGFVIEQFVLEMFDVYGNHVEEGLEVQFQLNGFSIPGLIG
SKHKVDNLGRIDLGGLLKVTAGYGKQVSLSILHGDKVTFKQAFQTEKRELRISSSIPEHC
LAGSTLENISFKVIDSKGDVDGTFHDDEKCGRFHTLVVKSESHQIDDSIRYAFKHGRCNI
ASLPLPQTEGPLFFKAFHSRYTELYCDVEISLVHAPNVDTDENEVQSSDGKLMLLQNSPF
FNNGNVGNVLALVKYDEGLKSELCKHGERVGKLENYLKTLNNRKTDIELYMSELQDSLEP
DLLVKDLDCLSTKEEITKLIKGRGHSAASTLLCSIAQGHWMDVMQDVVGVVALLGTVGSV
KLSRILAEYLGEDQMVAVVCKSYEVAPALEQYDHKGEVDSRLGLHAEATALSKSISGRFL
VVCLEDIRPYLGGVEVNDPQRKLILPAPRLLSGNYPQGFIGYAVNLVNLEHPHIDYRTES
GHGLRETLFYRLFSKVQVYETREEMENARNCITHGAVSLDGGILRKNGIISLGFRNPEIY
FPVQITNVSPERKKIMEQIKEKQLELRTTLQGINVASEKLDRARHKFNRKQKQYQKYLDN
IDDAINDTVTPSTTPSQCTQRLGTPSKVII
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaaggaccattttaagggtctaaagaggcgtttggcttttgatgatgaagat
tccgaccaagttctccgtttcaaagttttgttacccaatgggactagtgttggactagct
ttgaaaaacactgagtctgaaatctcatttcaaggtttcattgagttgattaaggacact
tatgacatggttaaacgtcaatctggttcgtttaaaaggaaaagaatgatagattggaag
aatgaaaagttatgtctcgaggatataaatggggttaaaactaggagcaggattgatttg
cggtgttttaaacagcacaagtgtcatattttaaaacttcatgatggctctggaaagttc
gccaatacttttgagaatatgtgggatttgaccccggatacagatttgttaatggagtta
ccagaagaatacacttttgaaactgctcttgcagatttgattgacaattccttgcaggca
gtgtggttgaatgatgtaaaccataggagattgataagtgtggctgttcttgagagtgga
atctcaatttttgacactggacctggaatggacaacagtgatgaaaactctattgtgaag
tggggaaagatgggtgcctctctaaacaggttatataaacaacaggcaatagggtgcaaa
ccaccattcttagtgcccttttttggcatgtttggatatggaggacctattgcatctatg
catctagggagctgtgttgaagtctcttccaagacaaaacaatccaagaaagtttacaag
ttacgtcttgcacgagaggctttacttggcaattctggctctgaatgtagttggagtact
gatggaggcattagggatcctcttgatgaagaaatcaaggaatcaccccatgggagcttt
acaaaggtggtgatattaaatcctgtagtgaaaaacttggacatatctaagctccaatgt
aagctgaaagacatatacttcccatatattcagtgtgatgagttgtccaacgttggcagg
actattacacctgttgggttccaggttaatggtcttgatttaactgaaattcaaggcggt
gaaattgcaaccaccaacttgcattcttgcaatggtcctgagtttactctattaatgcgc
ttttcccttaagaaggagaaaatttcaaccagtgcttcaggttcaagggctcctcaaata
gcaaatgcacgcctcaaatgtatttattttcctatccgtcaggggaaggagaatattgag
aggattttggagagtttggatgctgaaggatgtggagttggagaaaactttgagaattat
agtcgtgtctcaattcgtcgacttggtcgtctacttccagatgctcgttgggcaatactt
ccttttatggatttcaggcagagaaagggagatcagtctcacttgttgaaacgatgttgc
ttgagagttaaatgctttgttgagactgatgctggatttaatccaatgccttcaaaaact
gatttggcacaccatagtcctttctccattgctctaaggaactttggcaataggcctcag
gacaaagaaaaagatgttgaaattgaaattcatagagatggaaaacagttaacacctgtg
caactggaaagggagtaccgggaatggcttcttctaatgcatcataggtatgatgaagaa
atcgactctggtgaggatccgcctgttcttattgtcaatcccttgaacaagaaggcacta
ggaatatcatctgatgttataagggttcatcaagctctaaagagaaaggaattattgtgg
aaaagtggccagaaaatcaaagttctcaagggtgcatatgcagggtgttataagaacaac
gtctatgctacaatagaatatttcttgattgaaggatttgagggggattctggtggagaa
gctcggattatatgcaggccactaggtacagaaaatggttgtgaactttctgtaaagggt
ggaacacccaatttaaatattcaggattcattgtctcttccaattagcgtgattgattcg
ggaaagtgcatagccattaatgattctgattgggagcgtcaacttgagaaacacaaccag
aagactccctcaagaattgatctgctcaatgtgaaacaatgtcattggttggggatcgat
ggggcttttccaaccagtctcacgatacctgctggacaaacccctccagacgacattgtc
gctgtttttcgtccgagtagtttcgaggtttctaaggtttcaaattacttggaccagaag
gacattgtgaagactaatttagagatgttaatgaaagtacaatatagaactgagaaccat
cgagatgctaaacaaattaactcgcttcgcatagcaccttcatccttcaaagggtttcat
ggcttatataaatttccacttggggttaagttccctcacttgtttaagaaagcaggtgca
tatacattttcattctccagtgaacattctcgttgtcagaattacaatttaacaataacg
gtggttccttcagaaaaggttggaaagtggcagctactgggtgatacacggtttccatct
tatagtgtaagggtcggttcatgttttccacccttctctattgcatgctatgacatatat
gacaaccgaatgtcatttacctccattcctgacttaaagatcactctcggtatgaatgaa
tatttgagtgttgatgtggtcaagatgaagccatccctttcgtctgataagttggccatt
gttatcgaggatgtcatggttgaaactaatgggttagactcaatccggccaaattatgca
gccaccttgatgatatatattcaagatgagtcgacatcgattcctttggaatgtcaagtt
actcctggagctttacaccgtatcgaagtcagttcacaacttcctggaaagcaattactc
ccaggttttgtaattgagcagtttgtgctagagatgttcgatgtgtatggaaatcatgtt
gaagaaggattagaagttcaattccaattgaatggttttagcatcccaggtctaataggc
tcaaagcataaggtggataaccttggacgcattgaccttggaggcctactgaaagtcact
gcaggttatggaaaacaagtgtctctatctattttacatggtgataaagtaactttcaag
caagcatttcaaaccgagaaaagggagctacgaatatcatcaagtatacctgagcactgc
cttgctggttctacactggaaaatataagttttaaagttatagactcgaagggggatgtt
gatggaacttttcatgatgatgaaaagtgtggccggttccatacactggtagttaagtcg
gaatcacatcaaatagatgattccattcgctatgcattcaagcatggccgctgcaacata
gcttctttaccccttcctcaaactgaagggccccttttcttcaaagcttttcattctcga
tacactgagctatattgcgatgtcgagatttctcttgttcatgctccaaatgttgacacc
gatgagaatgaggtccagtcttcagatggaaagctgatgctcctgcagaattcaccattt
ttcaataatggcaatgtaggaaacgtactggccctagtgaaatatgacgagggactaaag
agtgaattatgtaaacatggtgagcgtgttggaaaattggaaaattatctgaagactctt
aataaccggaagacagacatcgagctctatatgtctgaattgcaagattctctggaacct
gatttattagtgaaagatctggactgtttgtccacgaaagaagaaataacgaagctaatc
aagggaagaggtcattctgcagcttctactcttctctgcagtattgctcaaggacattgg
atggatgtcatgcaagatgtagtaggtgttgtagccctactcggaacagttggctccgtt
aagctaagcaggattttagctgagtacttgggtgaagatcaaatggttgctgttgtgtgc
aaatcctatgaagtagcacctgccctcgagcagtatgaccataaaggagaagttgattct
cggcttggtctgcacgcagaagctactgcacttagtaaatctattagtggcagatttctt
gtagtatgccttgaagatataaggccttatctaggaggggttgaagtcaatgaccctcaa
aggaagctaatcttaccggctcctcggttactaagtggaaactaccctcaaggttttatt
ggctatgcggttaatttggttaacttagagcaccctcatatagattacaggaccgaatct
ggccacggtctgcgtgagactctgttctacagacttttcagcaaggttcaagtgtatgaa
acaagagaagagatggaaaatgctcgtaattgcataacacacggcgctgtgtctctggac
ggagggattctgagaaagaatggcattatatcactcggattcaggaaccccgaaatatat
ttccctgttcagatcacgaacgtctctccagaaagaaagaaaatcatggaacaaatcaag
gaaaaacaattggagctaagaacaactttgcaaggcatcaatgtagcaagcgaaaaactt
gatcgagctcgccataagttcaacaggaaacaaaagcaatatcagaagtacttagataac
atcgatgatgcaatcaacgataccgtaactccgagtacaaccccatcgcaatgcacccaa
cggctcggaactccctccaaggtgattatctaa
DBGET
integrated database retrieval system
