Gossypium arboreum (tree cotton): 108456221
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Entry
108456221 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108456221
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00601
Glycosphingolipid biosynthesis - lacto and neolacto series
gab00603
Glycosphingolipid biosynthesis - globo and isoglobo series
gab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
108456221
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
108456221
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gab01003
]
108456221
Enzymes [BR:
gab01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
108456221
Glycosyltransferases [BR:
gab01003
]
Glycan extension
P blood group
108456221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
108456221
NCBI-ProteinID:
XP_017610306
UniProt:
A0ABR0NV38
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Position
9:complement(80813494..80815315)
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AA seq
396 aa
AA seq
DB search
MTFKRVVSHEIFGHRLVSRSKSPVISIVLFSLLIFFMFAYSIISNMSLQSAAFNVLPISF
TISTQRNMIVEGDSENDQFHRGIRRKLPENEIFRSDELTEKFHGRVQEFFNHKCEVQFFM
TWISTVESFGAREILAVESVFKAHPHGCLMILSRTLDSAQGHMILKPLLDRGFKVQAVTP
DLPFLLNNTPAEAWFNDIKSGEKDPGGIPLAQNLSNLMRLAALYKYGGVYLDTDFIVLKS
FKGLKNTIGAQSINSTKNWTRLNNAVLVFDKNHPLLYKFIEEFALTFDGNKWGHNGPYMV
SRVVHRVEGRPGYNFTILPPVAFYPVDWIKIVRLFKVPSQQADPKWFEAKLQELNEKSYG
LHLWNKQSSKLMVEEGSAMGKLLSEHCVLCNQIYSS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttaaaagagtagtttctcatgaaatttttgggcaccggctagttagccggtcc
aaatcgcctgttatttctattgtcttgttttcgcttcttatattttttatgtttgcatac
agtatcatttctaacatgtcgctgcaatcggctgccttcaatgttcttcctatttcattc
actatttctacgcaaaggaatatgatcgttgaaggtgatagtgaaaatgatcagtttcac
aggggaatccgtagaaaactaccggaaaacgagattttcaggtcggacgagttgacggag
aagttccatggtcgggtccaggaattctttaatcataagtgcgaggttcaattcttcatg
acatggatttcgacggttgagtcttttggagcaagagaaatcttagctgtggaaagtgtt
tttaaggcgcatcctcatggttgtctgatgattctatcaagaaccctggactctgcccag
ggtcacatgatccttaaacccctgctcgatcgggggttcaaagttcaagcagtgacccca
gacttgccattcttgctcaacaatacgccggccgaagcttggttcaatgacatcaagagt
ggggaaaaggaccctggtgggatccctctggctcagaatctatccaatttaatgagactt
gcagctttatacaagtacggaggtgtctacttggacacggatttcatagtgctgaaaagt
tttaaaggtctgaagaatacaataggagcacaaagcattaattcgacgaagaactggacg
agattgaacaatgcagttctggtgttcgataagaaccatcccctcctatacaagttcatt
gaggaatttgctttaacatttgatggtaacaaatggggacataatggtccctatatggtt
tccagggtggttcatagagtggaaggaagacctggttacaatttcaccatcttgccacct
gtggccttttatcctgttgattggattaaaatagttcgcctttttaaggtgccatcacaa
caggctgaccccaaatggtttgaagctaagctgcaagagctaaacgagaagagctatgga
ctccatctctggaataagcaaagtagcaaactaatggttgaagagggaagcgcaatggga
aaattattatcagaacactgtgtcttgtgtaatcagatatatagttcttga
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