Gossypium arboreum (tree cotton): 108457881
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Entry
108457881 CDS
T05776
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like
KO
K12126
phytochrome-interacting factor 3
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04075
Plant hormone signal transduction
gab04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108457881
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
108457881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108457881
Transcription factors [BR:
gab03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108457881
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
108457881
NCBI-ProteinID:
XP_017612564
UniProt:
A0A0B0NQ91
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Position
7:complement(77018560..77022387)
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AA seq
473 aa
AA seq
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MTSDLPNGPFMRDPDFMELVWENGQVLIRGLSSKVTQKSFPFSSRSTANGSKDGGVADST
FAHPISGLSSLSKLDRHGVDANIVPVNNSNRLKPSYVPNQLVEDEVPCSSLQQFKGSKEE
KDGVNFSILRSNHASSGAMRTPGLAAGAEDLQGNNVRSAPPRSSNIPFGNEGDFMAKRMR
PTLPDSEPLKESFPDEQSEAVPNARLAPDDTAFKGNPDQMVASSSLCSRGASNCPTYTLK
RRYEDTDLSKNTTMEEAEGTTKAAPVPRGSKGAKRKRKTEVHNLSERRRRDKINKKMRAL
KELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSIGNGVYMPPMMVPLPSAMQHINAQHL
GGYSPMALGMGMRTQMGLGCGAPPQFPTSLMTGAPAVPGNPEARLIMLGFPDQMLLRSMS
HSPFLSSAASFTPQSFQPPAAVVSQSAAPPAAQVDLLGGANPLSTSKDSYPTH
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacatccgacttgcctaatggacctttcatgcgcgatcctgatttcatggagctggta
tgggaaaatggtcaagttctcattcgaggtttatcgtccaaggtaactcaaaagagtttc
ccgttctcatcgcgttctactgcgaatggatcaaaggatgggggggttgcagattccacc
ttcgcccatcccatatcaggtctctccagtctctcaaaactggatcgtcatggcgtggat
gctaatattgttccagtaaacaactccaatcgtttaaaaccaagctacgtgcccaatcaa
cttgtagaagacgaggtaccttgctcttccttgcagcagtttaagggatcaaaggaggaa
aaagatggggtgaacttttccatcttaagatcaaaccatgcaagctctggtgcaatgcgc
actccaggattagctgcaggtgctgaggatttacaaggcaataatgtcagatctgcgcct
ccaaggagtagcaatattcccttcggaaatgaaggtgatttcatggcgaagcgaatgagg
ccaacgttaccagattctgagcctctaaaagaatcattccctgacgagcaatccgaagct
gttccaaatgcgagattagcgccggatgatacagcttttaagggaaatccagaccaaatg
gtggcatcgtcttcattatgttcccgtggggcttcaaattgtcccacgtacactttgaaa
aggagatatgaagacactgatctcagtaaaaatacaacaatggaagaagccgaaggaaca
acaaaagcagcgccagttccacggggaagcaaaggtgctaagagaaagagaaaaacagaa
gttcacaacctatctgaacggaggcgaagagataaaatcaacaagaagatgcgtgcattg
aaagagcttatacccaactgtaataaggtggataaagcttcgatgcttgatgaagcaatc
gagtatttaaagacccttcagcttcaagttcagatgatgtcaataggaaatggagtatat
atgccaccgatgatggtccctttgccttcggcaatgcaacatataaacgcacagcatttg
ggtgggtattctcccatggcacttgggatgggtatgagaacgcaaatgggtcttgggtgc
ggcgccccaccacagttcccaacttcactaatgacaggagccccagctgtgcctgggaat
ccggaagctagactgatcatgcttgggttccctgatcagatgttactaaggtccatgtca
cattcaccttttttatcttcggctgctagtttcaccccacagtcgttccagccacctgcg
gctgtggtttcgcaatctgctgctcctcctgcggcgcaagtggatcttctaggtggtgct
aatccactttcgacatctaaggattcatatccaacacattaa
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