Gossypium arboreum (tree cotton): 108460197
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Entry
108460197 CDS
T05776
Name
(RefSeq) transcription factor PIF1-like isoform X1
KO
K16189
phytochrome-interacting factor
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108460197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108460197
Transcription factors [BR:
gab03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108460197
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
108460197
NCBI-ProteinID:
XP_017615087
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Position
7:complement(61084246..61089480)
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AA seq
560 aa
AA seq
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MNHCVPDFEMEDDDSIPSTLTRSKKPSMPEDEIMELLWQNGQVVMQSQNQRSIKKSPPFK
FQGADPSATKEIRSSSSHHHHQQQQQQQQQQQSLTDHHLFIQEDEMASWLHYPLSDASFD
HDFCADLLYPSSAAPCLTSTTATTSAPPPLGKVTQVSALAVASASRPPIPPSRRNELEST
RIQNFVHFSRHKAVRVEQSKQSNSKSVVRELTVVDSSDTPAMAPESGASQAMPCNTEAAS
GENDNINCANMSVAAGANTRSAGVSGSACKDNLAAYEVTVTSSPGGSGASAEPTAQKAAA
AEDRKRKGRELEDTEYHSEDVEFESADTKKQTRGSTSTKRSRAAEVHNLSERRRRDRINE
KMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGVQQYMPTMG
MGIGMGMGMDIGRPTMPFTNVLAGSPLPTPAAAAHLGPRFPMPPFHLPPPALAPAPAPDP
SRIQPNNQSDTMLNRLGVQNPNQPCVPNFADPYQQYNIGLHPMQLSPPQNQAMAQTSSSK
PSTSKGADNLENHPSGDMTR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaatcactgcgtccccgatttcgaaatggaagatgatgattccatcccttctacttta
actcgctctaaaaagccttccatgccagaggatgaaatcatggagctgttgtggcaaaac
ggtcaagttgttatgcagagccaaaaccaaagatctatcaagaagtcaccgccgttcaaa
ttccaaggcgccgacccatctgctaccaaagagatccggtcttcctcatctcaccatcat
catcaacaacagcagcagcagcagcagcagcagcaatcgcttaccgatcatcacctcttt
attcaagaagacgaaatggcttcatggcttcactatcctctcagcgacgccagcttcgac
cacgatttctgtgctgatctcctctatccttcctccgccgccccttgccttacctccacc
accgccacaacctccgctcctcctccactcgggaaagttactcaagtttcagctttagct
gtggcgtcagcttctaggcccccgataccgccgtcgaggaggaatgagttggagtcgacg
aggattcagaacttcgttcacttctccaggcataaagcggtgagggtggaacaatctaaa
cagtctaattctaagagcgtagttagggaattgacggtcgttgattccagcgatactccg
gctatggctcccgaatcaggagcctctcaggccatgccctgcaacactgaggcagcttct
ggagaaaacgacaatattaactgcgccaacatgagcgtcgctgcaggagccaacacgcga
tcagctggtgtcagcgggagtgcctgcaaagacaatttagccgcgtacgaggtcacggtg
acatcgtcacctggcggctccggtgccagtgccgaacccacggctcaaaaggcagccgcc
gctgaggaccggaagcgtaaaggaagagaactggaggacaccgaatatcacagcgaggat
gttgagttcgaatctgctgacacaaagaaacaaacacgaggatccacgtcaacaaaaagg
tctcgtgctgcagaggtccataacctctcagaaaggagacgcagagataggattaatgaa
aagatgagggctttgcaagaacttatacctcgttgcaacaagtcagacaaagcctcaatg
ctggatgaagcaattgagtatttgaagtcacttcagttgcaagttcagatgatgtccatg
gggtgtggcatggtcccaatgatgtttcctggtgttcaacaatacatgccaacaatggga
atgggaattggaatgggcatgggcatggatattggaaggccaacgatgccatttacaaat
gttttggctggctcaccattaccaacaccagcagctgctgctcatctgggtccaagattt
cctatgccaccctttcatctgccaccaccggctctggctccagctccagctcctgatcca
tcaagaatccaaccaaacaatcagtcagacaccatgttaaaccggcttggtgtacaaaac
ccgaaccagccttgtgtcccgaactttgctgatccttatcaacagtataatattggtctt
cacccgatgcaattatcccctccacagaatcaagcgatggcccagacaagttctagtaaa
cccagtaccagtaagggagctgataatcttgaaaatcacccatcaggtgacatgacaaga
tag
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