Gossypium arboreum (tree cotton): 108460198
Help
Entry
108460198 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108460198
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00020
Citrate cycle (TCA cycle)
gab00785
Lipoic acid metabolism
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
gab01200
Carbon metabolism
gab01210
2-Oxocarboxylic acid metabolism
Module
gab_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gab_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
108460198
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
108460198
Enzymes [BR:
gab01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
108460198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-GeneID:
108460198
NCBI-ProteinID:
XP_017615086
LinkDB
All DBs
Position
4:complement(14382828..14388952)
Genome browser
AA seq
1023 aa
AA seq
DB search
MGWLRAGSSVAKLAIRRTLSQGGSYAARSRIVPSQSRFFHTTVFKSKAQTAPVPRPVPLS
KLTDSFLDGTSSVYLEELQRAWEADPDSVDESWDNFFRNFVGQAATSPGISGQTIQESMR
LLLLVRAYQVNGHMKAKLDPLGLEEREIPDDLDPALYGFTEADLDREFFLGVWRMAGFLS
ENRPVQTLRSILTRLEQAYCGSIGFEYMHIADRDKCNWLRDKIETPTPMQYNRQRREVIL
DRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRL
NVLGNVVRKPLRQIFSEFSGGTKPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLV
ANPSHLEAVDPVVVGKTRAKQYYSNDEDRTKNMAVLIHGDGSFAGQGVVYETLHLSALPN
YTTGGTIHVVVNNQVAFTTDPRAGRSSQYCTDVAKALDAPIFHVNGDDVEAVVHACELAA
EWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYKIIRNHPSALQIYRNKLLESGQVT
DDDIGNISQKVSTILNEEFLASKDYVPKRRDWLSAYWTGFKSPEQISRVRNTGVKPEILK
NVGKAITTLPDNFKPHRAVKKVYEQRAQMIETGEGLDWAMGEALAFATLLVEGNHVRLSG
QDVERGTFSHRHSVIHDQETGEQYCPLDHVIINQNEEMFTVSNSSLSEFGVLGFELGYSM
ENPNSLVMWEAQFGDFANGAQVIFDQFISSGEAKWLRQTGLVVLLPHGYDGQGPEHSSAR
LERYLQMSDDNPFVIPEMDTTLRKQIQECNWQVVNVTTPANYFHVLRRQIHREFRKPLIV
MSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNMHSDLEEGIRRLVLCSG
KVYYELDEERKKNNATDVAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEEPMNMGAYN
YIAPRLAMAMTALGRGTFDDVRYVGRAPSASTATGFYSMHVKEQAELVQKAIQPEPIKTN
TTI
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggggtggcttagagctgggtcaagtgtggcaaagcttgctattaggaggactttgtct
cagggtggatcatatgctgcacgatcacgcattgttccttcacagagtcgattttttcac
accaccgtctttaaatcaaaggcacagactgctcccgttcctcgccctgttccactttct
aagctaactgatagtttcttagatggaaccagtagtgtatacttagaggagcttcaaagg
gcctgggaagctgacccagatagtgttgatgagtcgtgggacaatttcttcaggaatttt
gttggtcaggctgccacatctccaggaatttcaggccagaccattcaggagagtatgcga
ttgttattgcttgtgcgggcttaccaggttaatggtcacatgaaagcgaagttggatccg
ctgggtttagaggaaagggaaattcctgatgatttggatccagctctttatggttttact
gaagctgatcttgatagagaattctttttaggtgtgtggaggatggctggatttttatca
gaaaaccgaccagtgcagacacttaggtcgattttgactcggcttgaacaggcttactgt
ggaagcattgggttcgagtacatgcacattgctgaccgcgacaagtgcaactggttgaga
gacaagattgaaactccaacgccaatgcagtacaatcgccagcggcgtgaagtcattctt
gataggcttatatggagtacacagtttgaaaatttcttggctaccaagtggacaacagcc
aagaggtttgggctagaagggggtgaaactttaattcctggaatgaaagagatgtttgat
agggctgctgatctaggggtcgaaagcatagttattggaatgcctcatagaggaagattg
aatgtgctaggtaatgttgttcgaaagccacttcgtcaaatatttagtgagttcagtggt
ggtacaaagcctgtggatgaagttgggctttacacaggaactggtgatgtcaaatatcac
ttgggaacttcctatgatcgaccaacaagaggtggaaagagaattcatttgtctttagtt
gccaaccccagtcacttggaggctgtggacccagttgttgtcggaaaaactagagcaaag
cagtattactccaatgatgaggataggaccaagaacatggctgttttgattcatggagat
ggaagctttgctggacagggtgtagtctatgaaactcttcatcttagtgcacttccaaac
tacactactggtggaaccatacatgttgtagtcaacaaccaagtggcatttacaactgat
ccaagggcaggcagatcttcacagtattgtactgatgttgccaaagctttggatgctccc
attttccacgtaaatggagatgatgttgaggcagttgtccatgcatgtgaacttgcagct
gagtggcgccaaaccttccattcagatgtggtggttgatttggtctgctaccgtagattt
gggcataatgagattgacgaaccatcatttacacagccaaagatgtataagatcattcgg
aatcacccctcagcacttcagatataccgaaacaagttgttggagtctgggcaggtgaca
gatgacgacattggtaatataagtcagaaggtcagtacaattcttaatgaagaattcttg
gccagcaaagattatgttcccaaaagacgtgactggctttctgcttactggacgggattc
aagtcacctgaacaaatttcacgtgttcggaacactggggttaaacccgagatattgaag
aatgttggcaaagcaatcacaaccctcccagataattttaagcctcatagagcagtgaag
aaggtttatgaacaacgtgcgcagatgattgagacaggggagggccttgactgggctatg
ggtgaagcacttgcatttgctaccttgctggtggaaggtaaccatgttaggttgagtggt
caggatgttgaaaggggtacattcagtcatcggcattctgtgattcacgatcaggaaaca
ggggaacagtattgccctctggaccatgttatcatcaaccaaaatgaggagatgtttact
gtcagcaatagttctctttctgagtttggtgtgcttggattcgaattgggttactcgatg
gagaatccaaattcattggttatgtgggaagctcagtttggtgactttgctaatggtgct
caagtgatatttgatcagtttataagtagcggggaggcaaagtggctgcgtcaaactggt
ctcgttgtgctgcttccccatggttatgatggacaaggcccagaacattcaagtgcacga
ctagagcgttatcttcagatgagtgatgacaatccttttgtgatacctgagatggataca
actcttcgtaaacaaattcaggagtgcaactggcaggtggttaatgttacaacacctgct
aattacttccatgttttgcggcgtcagatacacagggaattccgtaagcctcttatcgtg
atgtcccccaaaaacttacttcgtcacaaggactgcaaatcaaatctctctgaatttgat
gatgtccaaggccaccctggttttgataaacaaggaaccagatttaagcgccttataaaa
gatcagaatatgcactccgaccttgaggagggtataagacgcttggtactttgttccgga
aaggtctactatgagcttgatgaagagagaaagaaaaacaatgctaccgacgttgctatc
tgtcgtgtggaacagctttgcccattcccttatgacctaatccaacgagagcttaagcga
tatccaaacgcagagattgtttggtgccaggaagaaccgatgaacatgggtgcatacaac
tacatcgcccctcgtcttgccatggcaatgactgctttgggtagaggaacctttgatgat
gtcagatatgttggccgtgctccatctgcttccactgctaccggcttctattccatgcat
gtgaaggaacaagcggagctcgtgcaaaaggccattcaacccgaaccgatcaagaccaat
accactatctga
DBGET
integrated database retrieval system
