Gossypium arboreum (tree cotton): 108472621
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Entry
108472621 CDS
T05776
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic-like
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00906
Carotenoid biosynthesis
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
Module
gab_M01040
Lutein biosynthesis, plants, lycopene => lutein
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
108472621
Enzymes [BR:
gab01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
108472621
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Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
FAD_binding_2
GIDA
FAD_oxidored
NAD_binding_8
Pyr_redox_3
FAD_binding_3
Pyr_redox
Motif
Other DBs
NCBI-GeneID:
108472621
NCBI-ProteinID:
XP_017629660
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Position
7:104574421..104579672
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AA seq
532 aa
AA seq
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MMITTSVGARNFEAVAVSKSATWRSHRRKDPVSTKMAVSNNQRLISLDVSGSGAARESYV
AVKEGDADEEDYVKAGGSQLLFVQMQQHKEMDEQSKLADKLPPISIGDNILDLVVIGSGP
AGLALAAESAKLGLNVGLISPDLPFTNNYGLWEDEIKDLGLEKCMEHVWPNTIVYLDDDK
PITIGRAYGRVDRRLLHEELLKRCVESGVMYLSSKVESIVEAIDGHNLVACEYEHVVPCR
LVVVASGAASGKLLQYEVGGPRVAMQSAYGIEVEVENNPYDPSMMVFMDYRDYAKEQVPC
LEDQYPSFLYGMPMSSTRVFFEETCLALKEAVPMDFLKKKLMSRLRAMRIRIVKVYEEEW
SYVPLGGSLPNMKQKNLAFGAAASMVHPATGYSIARSLSEAPNYASVIAKILKRDYSKGF
LTFKRNNWNMSIEAWNTLWPQERKRQRSFFLLGLALLLQLDTEGSRTFFRIFFRLPSWMW
QGFLGSTLSSIDLVVFAFSMFVTAPMDMKMLLIRHLLKDPTATTMISTYLTI
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgatgataacgacgtctgtcggagctcggaacttcgaggccgtggcggtttctaagtcc
gccacttggaggtctcataggagaaaagatccggtgagtacgaaaatggcggtttcgaat
aatcaacggttgatatcgttggacgtgagtggtagcggagcggcgagggagagttacgtg
gccgttaaggaaggtgacgccgatgaagaagattacgtaaaagccggcggatctcaactt
ctcttcgttcaaatgcaacagcataaggaaatggatgagcaatcgaagttagcggacaag
ttaccaccaatatcaatcggagacaatatactagacctagtggtcattggcagtggacca
gctggtcttgcccttgctgcagagtctgctaagttgggtttaaatgttggactaataagc
cctgatcttcctttcaccaataattatggattgtgggaggatgagattaaagatcttgga
ctcgaaaagtgtatggagcatgtttggccgaatacaatagtatacctcgatgatgataag
cccatcaccattggtcgtgcttatggacgtgtcgatcgacgtttgctccatgaggagttg
ttgaagaggtgtgtcgaatcaggcgtaatgtatcttagctcaaaggttgaatcaattgtc
gaagctatcgatggtcataatctcgtagcctgcgaatacgagcatgttgttccttgcagg
cttgttgttgttgcttcaggagcagcttctggtaaattattgcaatatgaggtgggaggt
ccaagggtcgccatgcaatccgcgtacggaatcgaggttgaggtggagaacaatccttat
gatcctagcatgatggtattcatggattatagagactatgctaaagaacaagttccatgt
ttagaagatcagtatccttcattcctttatggcatgcccatgtcatcaacaagagttttc
tttgaggaaacttgtttggctttaaaagaggccgtgcctatggatttcttgaagaagaag
ctaatgtcaaggttacgggccatgagaattcggattgtaaaagtttacgaagaggagtgg
tcttatgttccgcttggcggttccttgccgaacatgaaacagaagaaccttgcattcggt
gctgccgcaagcatggtgcatcctgctactggttattcaattgccagatcattatctgag
gctccgaattacgcttccgtgattgcgaaaatcctcaagagagattattcgaaaggcttt
cttacttttaaaagaaataattggaatatgtcaattgaagcttggaatactctttggcca
caagaaaggaaacggcaaaggtcattctttctcttagggttagcactcctattgcagctg
gataccgaaggcagtcgaacattcttccgcatattcttccgtttgccaagttggatgtgg
caagggtttctcggttcgactctttcttcgatcgatctcgtcgtatttgccttttctatg
ttcgttacagcaccaatggatatgaaaatgttgcttattaggcacttgctcaaggatcca
actgcaacaactatgataagtacatatctcacaatttag
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