Gossypium arboreum (tree cotton): 108480217
Help
Entry
108480217 CDS
T05776
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase-like
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00280
Valine, leucine and isoleucine degradation
gab00650
Butanoate metabolism
gab00900
Terpenoid backbone biosynthesis
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
Module
gab_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
108480217
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
108480217
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108480217
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
108480217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III_C
Motif
Other DBs
NCBI-GeneID:
108480217
NCBI-ProteinID:
XP_017638614
LinkDB
All DBs
Position
12:complement(115250805..115254877)
Genome browser
AA seq
465 aa
AA seq
DB search
MAKNVGIIAMDIYFPPTFVQQEALEAHDGVSKGKYTIGLGQDCLAFCTEVEDVISMSLTV
VTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKCGNTDIEGVDSTNACYGG
TAALFNCVNWVESSSWDGRYGIVVCTDSAVYAEGPARPTGGAAAIAMLIGPDAPIAFESK
FRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKYFCHKYEKLESKQFSLSD
ADYFVFHSPYNKLVQKSFARLVFNDFVRNASSVDDIAKEKLAPFSTLTGDESYQSRDLEK
ASQQVSKPLYDAKVQPTTLIPKQVGNMYTASLYAAFASLLHNKNSELAGKRVILFSYGSG
LTATMFSLRLHEGQHPFSLSNIATVMNVAGKLKARHEFAPEKFVETMHLMEHRYGAKDFV
TSKDSSLLSPGTYYLTEVDSKYRRFYAKKDGNCTGNENGSVVNGH
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaatgtgggaattattgctatggatatttacttccctcctacctttgttcaa
caggaagccttggaggctcatgatggcgtgagcaaaggaaaatacaccattggacttgga
caagattgtttggccttctgtactgaggtcgaagatgttatctcaatgagtttgacagtt
gttacttcactccttgagaagtataagattgaccctaaacaaattggccgtcttgaagtt
ggcagcgagaccgtgatagacaagagcaagtccattaagactttcctaatgcaaattttt
gagaaatgtggaaacactgacattgaaggggtcgactcaactaatgcatgttatggaggg
actgcagctctgttcaactgtgtcaattgggtggaaagtagttcatgggatggacgatat
ggcattgttgtttgtactgacagcgcggtctatgctgaaggaccagcccggccaactgga
ggagcagctgcaattgctatgctaatagggcctgatgctcctattgcatttgaaagcaaa
tttagggggagtcacatgtcccatgcctacgacttttacaagcccaaccttgctagtgaa
tatccggttgttgatggaaaactctctcaaacgtgctatctcatggctcttgatacttgc
tataaatacttctgtcacaagtacgagaaactagagagcaagcaattttccctttccgat
gctgactactttgtatttcattctccatataataagcttgtgcaaaaaagctttgctcgt
ttggtgttcaatgactttgtgaggaatgccagttctgttgatgacattgctaaagaaaaa
ttggctccattttcaactttgaccggtgatgaaagctaccaaagcagggatcttgagaag
gcatcccaacaagtttcaaagcccctttatgatgccaaggtgcaaccaaccaccttgata
ccaaagcaagttggcaacatgtacacagcatctctgtacgctgcttttgcatctcttctt
cacaacaaaaacagtgaactggcaggaaagcgggtaatattattctcatacggaagtgga
ctgactgccacaatgttttcattgcgactccatgaaggtcaacatccttttagcctatcg
aacattgcgacggtgatgaatgttgctggaaaattgaaggctaggcatgagtttgcccct
gagaagttcgtcgagactatgcacctcatggagcataggtatggagctaaagactttgtg
actagcaaagactctagcctgttgtctcccggaacatactacctcaccgaagtggattct
aagtaccggagattctacgcaaagaaggacgggaactgtactggtaatgagaatggttct
gttgtcaatggtcactga
DBGET
integrated database retrieval system
