Gossypium arboreum (tree cotton): 108482590
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Entry
108482590 CDS
T05776
Name
(RefSeq) transcription factor PIF7-like
KO
K16189
phytochrome-interacting factor
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108482590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108482590
Transcription factors [BR:
gab03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108482590
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
DUF6800
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
108482590
NCBI-ProteinID:
XP_017641208
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All DBs
Position
1:complement(19237461..19239908)
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AA seq
412 aa
AA seq
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MSHCVVPNCWNLKHQSQEQVHFVEEENEANRSSHISNPMSNHEVAELTWQNGQLAFHGLN
RHLPTASSKPTWGISGDTLESIVHQATCLHTQNHNFNLLQHDQNQTPAVVSSIAASSGSS
AVVKKRARSSSDVCGEIPRGGVGEEYASACASANAAFCKENDDSTMMTWASHLSPQTMKA
KAIDEDYAYQDGSENQDEEQETRGETDRSQATRRSRASAIHNLSERRRRHRIKQKMNTLQ
KLVPNASKTDKASMLDEVIEYLKQLQTQVEMMSMRNMAAQMMMQQTRWQLQMSALAPMGV
GMGIGMLDDNNSLAPNPSPVTAPTHTFLPPPPPSFVTPPPMIPTRFAAAAQANSDASSHG
SIPSPDPYCTFLAQSMNMELYNNKMAALYRPQINQTTQTSSNPSRSNNVAKD
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgagccactgtgtagttccaaactgttggaatctaaagcaccaatctcaagaacaagtc
catttcgtagaagaagaaaatgaagccaatcgatcttcccacataagcaaccccatgtcc
aaccatgaagttgcagagctaacatggcaaaatggtcagctagctttccatgggttgaat
aggcaccttcctactgcttcatcaaagccgacatggggtatttctggtgacacactagag
tccatagtccatcaagccacatgccttcacacccaaaaccataacttcaacttacttcaa
catgaccagaaccagacaccggcagtcgtgagctccattgctgcatcatcggggagctca
gcggtggtaaagaaacgggcacggtcgagctccgatgtatgcggggaaattccaagaggt
ggtgttggagaagaatatgctagtgcatgcgcgagtgctaatgctgcattttgcaaggag
aatgatgatagtacgatgatgacttgggcatcccatctgtcgcctcaaactatgaaggcc
aaagccatcgatgaggactatgcttatcaggatggatcggaaaaccaagatgaggaacag
gagactagaggtgaaacagatcgctcccaggccacaagacggagtcgagcatcagcaatt
cataatctctctgaaaggagacgaagacatagaattaagcaaaagatgaatactcttcag
aagctagtgccaaatgcaagtaagacagataaagcttcgatgcttgatgaagtgattgaa
tacttgaaacaactccaaacacaagtcgaaatgatgagtatgagaaacatggcggcccag
atgatgatgcagcagacgcggtggcagcttcaaatgtcggctttagctccgatgggcgtc
ggaatggggatcggaatgcttgacgataacaactccttggctcccaatccttcaccagtc
actgctcccacccacacatttcttcctcctcctcctccatccttcgtgacaccgccgcct
atgattccaacgcgcttcgccgcggctgctcaagcgaattcagatgctagctcacatggc
tctattccttcgcctgatccgtattgcacttttctagcgcaatccatgaatatggaactc
tacaataacaagatggcagcactgtatcgaccacaaattaatcaaactacacagacatca
agcaacccatcgaggtcaaacaatgtagcaaaggattaa
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