Gossypium arboreum (tree cotton): 108484060
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Entry
108484060 CDS
T05776
Name
(RefSeq) DNA polymerase kappa
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108484060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gab03400
]
108484060
Enzymes [BR:
gab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108484060
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
108484060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
zf_UBZ
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
108484060
NCBI-ProteinID:
XP_017643176
LinkDB
All DBs
Position
3:complement(3066476..3072327)
Genome browser
AA seq
694 aa
AA seq
DB search
MEESESASDKPRPWQSYHTVYTNAKAGMDGVDQEKVQKVVYEMSKGSKYFENEERKEAFN
RQKIEHMRARADKLSAADLSHYQKDADKRILELESTRDLSRIWLHVDMDAFYAAVETLSN
PSLKGKPMAVGSMSMISTANYEARKFGVRAAMPGFIALKLCPDLIFVPTDFKKYTYYSDL
TRKVFWDYDPNFMAASLDEAYLDITKVCEERSITGAEIAEELRSRVYEETGLTCSAGVAP
NRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTENILKGVFGVSTCE
EMLQKGSFLCALFSHSSADFFLSVGLGLGGTDTPEVRFRKSISSERTFSATEDAALLYQE
LANIAEMLSADMQKEGLSGRTLTLKLKTASFEVRTRAVTLQKYISSSDDILKHASNLLKA
ELPISLRLIGLRVSHFNEDKGGVPGDPKQKTLTTFLISGDASRRTGDDQRFLGSDLSDLH
FISEKETAISLDDNETCHHEFGDPFERKHLSDIDDKNCISSINACEMEKIDELSRNKTAA
MVNTADVKEWTTKSPKRDLSRVSEDDSSVQREPEDSNPDRLNKEPSTSGNEEFFSSNQME
MLFWVDDYKCSLCGAELPSSFVEERQEHSDFHLAERIQKEESGTGSSSLIPRLRIVPMDY
SGSQNRRKKHKSSPKQGMHLPIDSFFTKKGSRQL
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagcgaaagtgcgagcgataaaccgcggccatggcaatcttatcacactgtt
tacaccaacgccaaagcaggtatggatggagttgatcaagaaaaagttcagaaagtagtg
tatgagatgagcaaaggatcaaaatatttcgaaaatgaagagcgaaaggaggcttttaat
cggcaaaaaatagagcatatgcgagctcgagctgataagctttccgctgctgatttatct
cattatcaaaaggatgcggataagagaattttagagctcgaatctacacgagacctttct
aggatttggttacatgtagatatggatgctttttatgcggctgttgaaactttgagtaat
ccttcgttgaagggtaaaccgatggctgttggtagtatgtctatgatttccactgctaat
tatgaggctcgcaaatttggcgttcgtgctgccatgcctgggttcattgcgcttaaatta
tgtccagacttgatatttgttcccacagatttcaagaaatatacttattatagtgattta
actagaaaagttttttgggactatgatcctaatttcatggctgccagtttggatgaagct
taccttgatattactaaggtttgcgaagaaagaagcattactggtgcagaaattgctgaa
gaactcagatctagagtatatgaagagactggtttgacatgtagtgctggagtggctcca
aatcgcttacttgctaaggtttgctcagatattaacaagccaaatgggcagtttgtttta
ccaaatgaccgcatggctgtcatgacatttatatcttcacttcctattcggaagattggg
ggtataggcaaggtgacggaaaatattttaaagggtgtttttggagtcagcacttgtgaa
gagatgctgcagaaaggcagtttcctctgtgcgctattttctcattcttcagcagatttt
ttcctatctgttggattggggcttggagggacggatactcctgaggtcaggtttcggaaa
agtatcagcagtgagaggacattttctgcaacagaggatgctgcattgctttatcaggaa
ttagctaatattgcagagatgctgtcagctgacatgcaaaaagagggtctttctggacga
acattaactctaaaattaaaaactgcatcttttgaggttcgtacaagggctgtcaccttg
cagaaatatatttcttcgagtgatgacatcttaaaacacgcttcaaacttattaaaggct
gaactccctatttcgttgagactgataggtctgcgagtgtctcatttcaatgaagataag
gggggtgtacctggtgaccctaaacaaaaaactctcactacgtttttaatatcaggagat
gcttctagaagaactggggatgatcaacgcttcttaggttcagatttgagtgatctccac
ttcataagtgaaaaggaaactgccatttctcttgacgacaatgagacatgtcaccatgag
ttcggagatccatttgagaggaagcatttatcagatatagatgacaaaaattgcatttcc
agcataaatgcttgtgaaatggagaaaattgatgaactttctaggaacaaaactgcggcc
atggtgaatactgccgatgtgaaagagtggaccacaaaatctcctaaaagagacttatca
cgagtgtcagaagatgattcttccgtccagagggagccggaggacagcaatcctgacaga
ttaaacaaagaacctagtacctccggaaatgaggaatttttttcatcaaatcagatggaa
atgttattttgggtggatgactacaagtgttcattgtgtggggctgaattaccttcaagt
tttgttgaagaaagacaagagcactctgatttccatcttgccgagaggattcagaaggag
gaatctggtacaggctcgagctctttgattccaaggctaaggattgtcccaatggattat
agtggaagccaaaatagacgtaagaagcataaatcatcaccaaaacaggggatgcatctg
ccaattgattcattctttaccaagaagggcagtcggcaattgtaa
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