Gossypium arboreum (tree cotton): 108486224
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Entry
108486224 CDS
T05776
Name
(RefSeq) peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-like isoform X1
KO
K10527
enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [EC:
4.2.1.17
1.1.1.35
1.1.1.211
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00071
Fatty acid degradation
gab00592
alpha-Linolenic acid metabolism
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
gab01212
Fatty acid metabolism
Module
gab_M00087
beta-Oxidation
gab_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
108486224
00592 alpha-Linolenic acid metabolism
108486224
Enzymes [BR:
gab01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
108486224
1.1.1.211 long-chain-3-hydroxyacyl-CoA dehydrogenase
108486224
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
108486224
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-GeneID:
108486224
NCBI-ProteinID:
XP_017645635
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Position
7:complement(105411717..105423326)
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AA seq
724 aa
AA seq
DB search
MSQIRVMMEVGDDSVAVITIFNPPLNTMAVSIIAGLMEKFDEVSRRNDVKAAVLTGSGGK
FCGGLDLNVIQKVHLTGDVSLVPQASVDLALTAIEDCNKPIVAAIEGLALGGGLELAMSC
HARIATPKAQLALPELSLGLIPGLGGTQRLPRIVGLSKAIEMLMSSKPILSEGGKKLCLI
DAIAPSQELLKISRKWALDIAERRKPWVKSLQRTDKIGSLSEAQEVLRFARHQAKRTAPN
SSLHQACLDVIEEGILHGGYKGLLKEDKVFRETVLSDNSKGLVHLFFAQRATSKVPKVTD
VGLKPRQIKKVGVIGGGLMGCGIATALIVSNICVLLKELNSDYLLKGIERIQANVRGLVT
RGKLTKDKADKALSILKGVLDYSEFKDVDMVIEAVIENVGLKQKIFSEIEKACPPHCILA
TNTSTIDLNLIADKLNPQDRVIGAHFFSPAHVMPLLEIVRTQKTSPQVILDLMTIGKVIN
KVPVVVGNCTGFAVNRTFFPYTQGAHLLVNLGVDLFRIEGVISNFGLPMGPFQLQDVSGY
GVFLAVWKEFAKAFPDRVFMSPLIELLMKNGRNGKINGKGYYIYEKGSKPKPDPSILPII
EESRQQTKLMPAGKLITITDKEILEMVLFPVVNEACRVLDEGVVVRASDLDTTSVLGMSF
PSHRGGIVFWADTVGANHVYKSLKKWSEAYGSFYKPSKYLEERAIKGIPLSAAATSSPSS
KSRL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaatacgagtgatgatggaggtcggagacgacagcgttgcggttatcaccatc
ttcaatcctcccctgaacaccatggctgtttcaataattgcgggattgatggagaaattt
gacgaggtttcgcggagaaacgatgttaaagctgctgttttaaccggcagtggaggaaag
ttttgtggtggtttggatctcaatgttattcagaaagttcacttaaccggtgatgtatct
ttggtgcctcaagcatccgttgatcttgctcttactgctatcgaagattgcaataagcct
attgtggcagctattgaaggattagctcttggaggtggcttagaattggcgatgagttgc
catgcacgtattgctactcctaaagctcaacttgccttgcctgaattgtcgcttggactg
attcctgggcttggaggcacacaacgtctcccaaggattgttgggctgtcaaaggctatt
gaaatgttgatgtcatcgaaaccaatcctgtctgaaggaggaaagaaactgtgtcttatt
gatgctattgctccttcacaagagttgctcaaaatttctcgcaaatgggctttggacatt
gcagagagacgtaaaccatgggtgaaatcccttcaaaggacagacaagattggatcccta
tctgaagcacaagaggtgttaagatttgctagacatcaagccaaaaggactgccccaaat
tcatctctgcatcaagcatgcctagatgtaattgaggaagggattctccatggaggatat
aaaggacttttaaaggaggacaaggtttttagggagacagtcctttcagacaattcaaaa
ggccttgttcatctgttctttgcccagcgtgctacttcaaaggtgccaaaggttactgat
gttggtctaaaacctaggcaaataaagaaagttggtgttattggtggaggcctaatgggt
tgtgggatagccacggctcttattgtcagcaatatatgtgtccttctcaaggaactaaac
tctgattatctccttaagggaatagagaggattcaagcaaatgttcgaggtttagttaca
agaggaaaattaacaaaggataaagcggacaaagctctctcaatccttaaaggagtatta
gattactctgaatttaaagatgtagatatggtcatagaggctgtgattgaaaatgttggt
ttaaagcaaaaaatatttagtgagatagagaaagcatgccctcctcactgtattttggcc
acaaacacatccactattgacctcaatctaattgcagacaaattaaacccacaagatcgt
gttataggagctcattttttcagccctgcacatgtgatgcctctcttggagattgtaaga
acacaaaaaacttccccacaagttattcttgatcttatgacaattgggaaagtgataaac
aaagttcccgtcgtggtcggtaactgcaccggttttgctgtcaaccggacattcttcccc
tacacgcaaggtgcacatttattggtcaatttaggtgtcgacttgttcagaatcgaaggg
gtgatcagcaactttggccttcctatgggtcctttccagcttcaagatgtatctggttac
ggagttttcttagcagtttggaaagaatttgcaaaggcatttccagatcgagtattcatg
tctccattgattgagcttttgatgaaaaatggacgaaatgggaaaatcaatgggaaagga
tactatatttatgagaaaggaagcaagccaaaacctgatccttctatattacctattatt
gaggagagtcgacagcaaaccaagcttatgcctgctggaaagcttataacaattactgat
aaagaaatcctagagatggtgctgttcccagtagttaatgaggcatgtcgagttctggat
gaaggagtagtggttcgagcatcagaccttgatactacatctgttcttggaatgagcttc
ccatctcaccgtggtggaatagtgttttgggcagatacagttggagcaaatcacgtatat
aaaagtctaaaaaaatggtcagaggcgtacggtagcttctataaaccatcaaagtatttg
gaagagagagccattaaaggcatcccattgagtgcagcagcaacttcatctccatcatca
aagtcaaggctttga
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