KEGG   Gossypium arboreum (tree cotton): 108488019
Entry
108488019         CDS       T05776                                 
Name
(RefSeq) uncharacterized protein LOC108488019
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03420  Nucleotide excision repair
gab04120  Ubiquitin mediated proteolysis
gab04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108488019
   04120 Ubiquitin mediated proteolysis
    108488019
  09124 Replication and repair
   03420 Nucleotide excision repair
    108488019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gab04121]
    108488019
   03400 DNA repair and recombination proteins [BR:gab03400]
    108488019
Enzymes [BR:gab01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     108488019
Ubiquitin system [BR:gab04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   108488019
  Multi subunit type E3
   SCF complex
    Ring finger protein
     108488019
   Cul2 complex
     108488019
   Cul3 complex
     108488019
   Cul4 complex
     108488019
   Cul7 complex
     108488019
   Cul8 complex
     108488019
   Cul9 complex
     108488019
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      108488019
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      108488019
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4_2 zf-RING_11 zf-C3HC4 RH_dom
Other DBs
NCBI-GeneID: 108488019
NCBI-ProteinID: XP_052884463
LinkDB
Position
5:1735894..1741157
AA seq 140 aa
MAVHQPMCIRRPGICEFCERERISSRPICSVPAMSTQTSGSTAPSSSTEDPKHFDMKKWS
SVALWSWDIVVDNCAVCRNHIMDLCIECQANQIVGADNECTVAWGACNHAFHFHCISRWL
QNRSVCPLDNAEWEFRKYGR
NT seq 423 nt   +upstreamnt  +downstreamnt
atggctgttcaccagccaatgtgtatcagaaggccaggtatatgtgagttttgtgagaga
gaaagaatttcttcccgccctatttgttcggtcccagccatgtctacccaaacttccggc
agcaccgccccttcctcctccactgaggaccccaagcacttcgatatgaaaaagtggagt
tcggttgccctctggtcctgggatattgtcgtggataattgtgcggtttgcaggaatcac
atcatggatctctgtatcgaatgccaagccaaccaaatagtcggtgccgataatgaatgc
actgttgcgtggggtgcatgcaaccatgcattccactttcactgcattagtcgatggctg
cagaaccggtcagtatgtcctttggataatgctgaatgggagttccgaaagtatggtcgc
tag

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