Glycocaulis abyssi: AB6B38_00250
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Entry
AB6B38_00250 CDS
T10778
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
gaby Glycocaulis abyssi
Pathway
gaby00300
Lysine biosynthesis
gaby00550
Peptidoglycan biosynthesis
gaby01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gaby00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AB6B38_00250
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AB6B38_00250
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gaby01011
]
AB6B38_00250
Enzymes [BR:
gaby01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AB6B38_00250
Peptidoglycan biosynthesis and degradation proteins [BR:
gaby01011
]
Precursor biosynthesis
Amino acid ligase
AB6B38_00250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
XER17364
LinkDB
All DBs
Position
54626..56104
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AA seq
492 aa
AA seq
DB search
MSTTRKLADILPGGVSVPDGARDLAITGLALDSRAVKPGFVFAALPGVTAHGNAFIKAAV
EAGAVAILAERGTSAPVPVIEADDPRLALAQMAARFSPGQPRYIAAITGTNGKSSTVEFL
RQIWQAAGHEAAALGTLGVTRSSGRTDVGYTTPDAIALHAALDALSHEGVTHLAMEASSH
GLKQRRMDGAKIALAGFSNLTQDHLDYHPDFEDYFASKMRLFDELLPEGAPAVITVDSEW
GEAVVRRAEARHQQIFTVGWNGRDIQLKEITPHAAFQHVRFVHAGKEHVLTLPLMGEFQA
SNAFQAAGMAIASGVDAGTVFAALETLKGVAGRLELVGTTPEGAPVLIDYAHTPDGLDKL
LRAARPHTAGRVIVVFGAGGDRDPTKREKMGAIAAKLADRVIVTDDNPRSEDPALIRKAI
LKGAPGAEEIGDRETAIFTAIGALEAGDTLLIAGKGHETGQTIKGVVHPFDDGEVARRAL
AARAGKTWERGQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaacccgcaagctcgctgacattctgcccggcggcgtgagcgtgccggacggt
gcgcgtgatctcgccattaccgggctggcgctggacagccgggcggtgaagcccggcttt
gtctttgccgctcttcccggcgtgacggcgcatggcaatgccttcatcaaggcggcagtg
gaagcgggcgcggtggcaatactcgccgagcgtggcacgtcagcgcccgttccggtgatc
gaggcggatgatccgcgtctggcgctggcgcagatggcggcgcgcttctctcccggccag
ccccgctatatcgcggccatcaccggtactaacggcaaaagctccacggtggagtttctg
cgccagatctggcaggcggcaggccatgaggcggcagcgttgggtacgctgggggtgacg
cgcagttccgggcgcaccgatgtgggttacaccacgccggacgcgatcgccctgcacgcc
gcgctcgatgcgctcagccacgaaggtgtcacccatctggcgatggaggcgtctagccac
gggctgaagcagcggcgcatggacggcgcgaaaattgccctggcagggttttccaacctc
acccaggaccatctcgattaccacccggattttgaggactatttcgcgtccaagatgcgc
ctgttcgacgagctgctgcccgaaggcgcccccgccgtcatcacggtggacagtgaatgg
ggcgaggcggtggtgcgccgcgccgaggcgcgccatcagcagattttcaccgtcggctgg
aatgggcgtgacatccagctgaaggaaatcacgcctcatgccgccttccagcatgtgcgc
tttgtccatgcgggcaaggagcatgtcctgaccctgccgctgatgggcgagtttcaggcc
agcaacgcctttcaggcggccggtatggctatcgcgagcggggtagatgccggcaccgtg
ttcgctgcgctggagaccctcaagggcgtggcagggcgtctggagcttgtcggtacgacg
cctgagggcgcacctgttctcatcgactatgcccatacgccagacgggctcgacaagctc
ctgcgtgcggcccgtccgcatacggcaggccgggtgatcgtggtattcggcgcaggcggc
gaccgcgatccgaccaagcgtgaaaagatgggcgctatcgcggccaaactcgccgaccgg
gtgatcgttaccgacgataatccgcgttctgaagacccggccctcatccgcaaggcgatc
ctgaaaggggcgccgggtgccgaagagatcggtgaccgtgagaccgccatcttcaccgcc
atcggtgcgctggaagcaggtgacacgctgctgatcgccggcaagggccatgagaccggc
cagaccatcaagggcgtggtccatccgtttgatgatggcgaagtggcgcgccgcgccctc
gctgccagagcaggcaagacctgggagcgggggcaatga
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