Glycocaulis abyssi: AB6B38_04095
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Entry
AB6B38_04095 CDS
T10778
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
gaby Glycocaulis abyssi
Pathway
gaby01501
beta-Lactam resistance
gaby01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gaby00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AB6B38_04095
01503 Cationic antimicrobial peptide (CAMP) resistance
AB6B38_04095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gaby02000
]
AB6B38_04095
01504 Antimicrobial resistance genes [BR:
gaby01504
]
AB6B38_04095
Transporters [BR:
gaby02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AB6B38_04095
Antimicrobial resistance genes [BR:
gaby01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AB6B38_04095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
XER18094
LinkDB
All DBs
Position
complement(831018..834164)
Genome browser
AA seq
1048 aa
AA seq
DB search
MAEPSQRGGIVHHAIRRPVGTLAIASVVLVLGLFFVTRLPVDLLPRIEYPQITVTVNYPG
AAPEVMEQQITRVLESNLAATENLIRIDSRASEGRTNVNLHFDYGTNLDIALQDASRYLE
LARTQLPPGIEPPRIYKRDPSQAPVWTAGFSSPTRSQVEVNEWVERRLAPQLLAIGGVSG
VEAAGGQVREMEVLVDQDRLASYGLSMQDVIDALADENVDIAAGWVTSASFDVMAKTDGL
FTSAEDVANVLINLPGGNGRRIPLSELAEVRDGHREQRLFARLDGTPAVQVSVFKLPGAN
TVEVVDEVNDAIGQLSRSGFIPDDIVFEVIGDTAFFIRSAVSSVASAAILGGVLAMVFVL
FFLGSLRRSFVIGLAIPIALLATFVMMGLGGLTLNIISLGGLALGVGLLLDNSIVMLENI
HRHRQELGKDPERAAHDGAGEVAGAIIAGTLTNLAAVVPFLLITGLAALIFRELMLTISF
AIIATLAAALTLTPMLAVLVSRARFESGLAGSRPIRAFDGGVQFLRRRYRRVLPRLLRWR
AAVIAAALAVFAGSLWLGSNLGTEFLPQVDDGQVSVRLSLPPGSPPHETDAAARQIEAVL
GADPYVQSMFTLVGGHLGGGIVNERPGTSNIRVQLTDARERPEMPAGVWVANMREALEAL
DIPGARIWVRPPSISGLNFGPGEGSFSISVVGEDLTLSRQAARQISARLQGIRGLEGVEV
GREDESPLMRISVDTERASALGLRTSEIGAAVRAAVDGAVPTRFMADAQEYELRVRLPRS
QTGDSAALANLILFRPQGAPVRLGDVATISLGAGPAHIERDNQNRVVRVNGEINTAVSDV
STVMAQVEGRLADMDLPDEIGLVFEGQWQTIQETNRELTTVVLLALFLVFVVMAVQYERI
SNPLVILATAPLAITGVVLALVLTGTPLSAPVMIGAILLIGIVVNNAILLVEYIEKGRRE
RGLSPARAVVSAGTARLRPVLMTTATTALGMSPLAFGAGPGGEIMQPLALAVIGGLLVAT
VLTLLVIPSLYLIVDGASRRLTSLMTGR
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggctgagccttcccagcgcggcggcatagtccatcatgccatacgcaggccggtcggc
acgctggctattgcgtctgtcgtgttggtgctgggcctgttctttgtcacccgcctgccc
gtcgatctcctgccccggatcgaatacccgcagattaccgtgacggtgaactatccgggc
gccgctcccgaagtgatggaacagcagatcacgcgggtgctggaaagcaatctggcggcc
accgagaaccttatccggatagacagccgggcgtctgaaggccgtacgaatgtcaatctg
cacttcgattacggcaccaatctcgatatcgccctgcaggatgcctcgcgctatctggaa
ctggcgcgcacccagctgccgccgggtatcgagccgccgcgcatctacaagcgtgacccg
tcccaggccccggtctggacagccggtttcagctcccccacccgctcgcaggttgaggtg
aatgaatgggtggaacgccgtctcgcgccccagcttctggctattggcggggtgtccggc
gtggaagcggcgggtggtcaggtgcgcgagatggaggttctggtcgatcaggaccggctg
gcctcctacggcctgtccatgcaggacgtgatcgacgcgctggccgatgaaaatgtcgat
atcgctgcaggctgggtaacgtccgccagctttgatgtcatggccaagaccgacgggctt
ttcacctccgctgaagatgtcgccaatgtgctgatcaacctgccgggcgggaatggacgg
cgcattccattgtcagaactggccgaggtgcgggacggtcatcgcgagcagcgcctgttt
gccaggctcgatggcacgcctgcggtgcaggtttccgttttcaaattgccaggcgccaac
accgtcgaggtcgtcgacgaggtcaatgacgccatcggccagctctcccgctccggcttc
atccctgacgatatcgtcttcgaggtgatcggcgacaccgcctttttcatccgctccgcc
gtcagctcggtggcgagcgctgctattctgggcggtgtgctggccatggtgtttgtcctg
tttttcctgggcagcctgcggcgcagcttcgtgatcgggctggccatacccatcgccctt
ctggccacgttcgtgatgatggggctgggcggtctgaccttgaacatcatctcgctgggc
gggctggcgctcggtgtcggcctcctgctcgataactccatcgtcatgctggaaaacatc
caccggcaccggcaggagctgggcaaggatccggagcgcgcggcccatgacggggcaggc
gaagtggccggtgcgatcatcgcaggcacgctcaccaatctcgccgccgttgtgcccttc
ctgctgattacgggcctcgccgcgctcatcttccgcgagctgatgctgaccatctccttt
gccatcatcgccacgctcgccgccgcgctcaccctcaccccgatgctggccgtgcttgtc
agccgtgcgcggttcgaaagcgggcttgcgggatcacgcccgatccgggccttcgatggc
ggtgtgcagttcctgcgccgccgctaccggcgtgtgctgccgcgcctgctgcgctggcgg
gccgccgttattgccgcagccctcgctgtctttgccggatcgctctggctgggctctaat
cttggcacggagtttctgccacaggtcgatgatggccaggtctcggtgcgcttgtctctg
ccgccgggtagtccaccacacgagaccgacgcagccgccaggcagatcgaggcggttctg
ggcgctgacccttatgtacagtccatgttcacgctggttggcggccatctgggcggcggt
atcgtcaatgagcgccccggcacgtccaatatccgtgtccagctgaccgatgcgcgcgag
cggcctgaaatgccagccggtgtgtgggtggcaaatatgcgcgaggcccttgaggccctc
gatattcccggcgcgcgcatctgggtccgcccgccgtcgatctcagggctcaatttcggc
cccggcgagggcagtttctccatctcggtcgttggcgaggacctcaccctctcccggcag
gccgcccgccagatcagcgcgcgcctgcagggtatccgcggtctggaaggtgtggaggtt
ggccgcgaggatgaaagcccgctcatgcgcatcagcgtggacaccgaacgggcgagcgcg
ctgggcctgcgcacctccgagatcggcgccgcggtgcgtgctgcggtcgatggcgcggtg
ccgacccgcttcatggccgatgcgcaggaatacgagctgcgcgtgcgcctgccacgcagc
cagaccggtgacagcgcggcgctcgccaatctcatcctcttccgcccgcaaggtgcgccg
gtgcgccttggtgatgtcgccacgatcagccttggtgccggtcctgcccatatcgagcgc
gataaccagaaccgcgtggtgcgggtaaacggagagatcaataccgccgtctccgatgtc
tccaccgtgatggcgcaggtggaagggcggctggcggacatggacctgccagacgagatc
ggcctcgtcttcgagggccagtggcagaccattcaggaaaccaaccgggagctgaccacc
gttgtcctgctcgccctcttcctcgtcttcgtggtgatggccgtgcagtatgagcgcatc
tccaatccgctggttatcctcgcgacagcgccgctggcgatcaccggcgtggtgctggca
ctggtgctgaccggcacgcccctgtccgcgccggtgatgattggcgcgatcctgctgatc
ggcattgtggtcaacaatgccatcctgctggtggaatatatcgagaagggacgccgggag
cgtggcctgtcaccggcgcgtgcggtggtctctgcaggcacggcgcgcctgcggcccgtt
ctgatgaccacagccacgaccgcgcttggcatgtcgccactggccttcggcgccgggccg
ggcggagagatcatgcagccgctggcgctcgccgtgattggcgggcttctggtggcgacc
gtgctcacactgctcgtgatccccagcctctacctgatcgtggacggcgcttctcgcagg
ctgacatcgctgatgacggggcgataa
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