Gymnodraco acuticeps: 117534431
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Entry
117534431 CDS
T09661
Symbol
smg6
Name
(RefSeq) LOW QUALITY PROTEIN: telomerase-binding protein EST1A
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117534431 (smg6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117534431 (smg6)
03032 DNA replication proteins [BR:
gacu03032
]
117534431 (smg6)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
117534431 (smg6)
mRNA cycle factors
Common to processing body (P body) and stress granule
117534431 (smg6)
DNA replication proteins [BR:
gacu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
117534431 (smg6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
117534431
NCBI-ProteinID:
XP_034054516
UniProt:
A0A6P8SVI7
LinkDB
All DBs
Position
Unknown
AA seq
1660 aa
AA seq
DB search
MANELDRVRISAAELRAEASNSINIDDCQKEEQQEYHVHKQRKGEGKHPRPELQRYQPVA
GNGRCHRDDEEGETSGPLPADSHDEPPQSEKKVENALERHGCTDSGAVTDKREEDRKRGD
GSNTQNCRKGNSSQPKAEANQEKVSVEDDKDHQEPVGAARATRKARKPDRELYQPGSRRS
IQGKDCGVGKEQDKPPPSNNGQTSEPESQMSTGEKEGNQKTCLQEQEVGNKEVTVKPNNV
KLPKSTEKNRKQGGRDVEKNPLPSNATVDKMTSNIDKLSMKEKVGCDSQVIDELSCERGE
TSSKEKRGQGRGTKEEEEKVEMKREKGNRNRRGEDKERESNPDSRRGKEEAGSRGKVDRG
KAEKERDKRAPDADKDNKPGNTGEPHQSKGRENRRESKRGDNNNNNRSRDAENDAKTERD
RAVEGGDRNKSNANSTTANSKRYSKSDIRRSRNRTYSSSSASSVTSLDGPRVRMDVERTK
WPHAEPQHKEGVATSGAGRRSHLKSWTTNGESSTESMEGSEMSDKAEERKRRGGREELSA
ERQRVERSKPKGTRGGDRGILRVSLEKLPGTPSHVAVSQHRGPGLVPRGRGGGILILPAR
TDISNSPEVGQRLLFGGIRGGGAARSRGGRGGGGGGGARRLWDPNNPDQKPALTATQSSQ
HSSRQQPVYLQTGAGIGQLHFLDTDDEVAGSPPVAQGDHFRAQQVAAMAFYKFQNSDNPY
GHPVPASNSHSPGSTASYAYPYQMGPYQMAPANGMYPVGQFCGSYRGAGYPQPVAGGSLT
SEEVEQQARGELGRMLRAADAQELQLSNLLSRDRVSAEGLERMAQLRADILGLYEQVLLT
DIDYSDSQNVDQALWKNVFYQVIERFRQLLKDPAYDNTPHVKNMLLILLDEGALFFDALL
QKLQTVYQFKLQDYMDGIAIRARPLRKTVKYALISAQRCMICQGDIARYREQASDSANYG
KARSWYLKAQQIAPKNGRPYNQLALLAVYTNRKLDAVYYYMRSLAVSNPILTAKESLMSL
FEEAKRKIEQLERRRRQEHEGGSRGPAVKGRGRGEDGARVEIWIRPSGQAATPSSQRGGS
ESSRDSEQDGELGSLSASDLNKRVNLSFLHAHGKLFTKVGMESFPGMATRVLLEFKTLLQ
HSPSLLGSTHMLQIITINMFTIHNAHSRAEDKEVRSVLQEQSTALGLGMFALLVQRCTEL
LKETPTEPVPMADGEEEGKGEELEGMVRVSAFSLDLRELLPSIKVWSDWMLGQPDQWNPP
PCSIDGSPDVWQGLADLCNMLARVDHEEVPLYKADTEEVDGDEELTVLQLKEDRLLAGFV
PLLAAPQEPCYTDRHTDVAIAADCKRVTVLKYFLEALCGQEEPLLAFKGGEYISVATSPP
LNHSKNTKSRQDSLTEKEADDVIIEAESSLSASEGEEDAEDVGDSENDIRELKARRHVLT
NKLAQQQKRRDKIQAVLQTGGQLELEVRPRFLVPDTNGFIDHLGGLKRVLQCGTYIIVVP
LIVITELDGLAKGQDNFAGGMGPGGRTTGGRGNYNVNTAHVRAVQEKARLAVSFLEKGFE
AREPCLRALTSRGNQLESISFRSEDTSGQQGTNDDVILSCCLNYCKDKAKDFMPDQRNGT
VKLQREVVLLTDDRNLRVKALTRNVPVRDIPAFLSWAKVG
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaactggacagagtgcgaatctcagctgcggaactccgagctgaagcgtcg
aattcaatcaatattgatgactgtcagaaagaggagcaacaagagtatcacgtacacaag
caaaggaagggagaaggaaagcaccctcgccctgaactgcagcgctaccagccagtagct
ggaaatggaaggtgtcaccgtgacgatgaggagggagaaactagtggccctctgcccgct
gattcccatgatgaaccgccacagagtgagaaaaaggttgaaaacgctttagagagacat
gggtgcacagacagtggggcggtcaccgacaaaagggaagaagacaggaagagaggtgat
ggtagtaacactcagaactgtagaaaaggcaacagctcccagcctaaagcagaagcaaat
caagagaaagtttctgttgaagatgacaaagaccaccaggaacccgttggagctgctagg
gcaacacgaaaagctcgaaaaccagaccgagaattgtatcaacctgggagccgaagaagc
atccagggaaaagactgtggagttggaaaagagcaggataagcctccacctagcaataac
gggcagacaagtgagccagagtcccagatgagtacaggagaaaaagaggggaaccaaaaa
acgtgtttacaggagcaggaagtgggaaataaagaagtaacggttaaaccaaataacgta
aaattgcctaaatccactgagaaaaaccgaaagcaaggaggccgagatgtggaaaaaaac
ccattaccctcaaatgctacggtggacaaaatgactagcaacattgacaaacttagcatg
aaagaaaaggtgggatgtgacagccaagtcattgacgagttaagttgcgagagaggggaa
acatcttccaaggaaaagagaggccaaggtagaggaacaaaagaggaggaggaaaaggta
gaaatgaaaagggaaaaaggaaaccgcaaccgaaggggagaagataaggagagggagagt
aatccagattccagacgagggaaagaggaagcaggcagtcgaggaaaggttgaccggggg
aaagctgagaaggaaagagacaagagagcaccagacgcagacaaggataataaaccaggt
aacactggagagccgcaccaaagcaaaggaagagagaatcgcagagaaagcaaaagagga
gacaacaacaacaacaaccggtcaagagatgctgaaaacgatgctaaaaccgaaagagac
agggcagtggaaggaggcgatagaaacaaatccaatgcaaacagcacgacggcaaactca
aaacgctattccaagtcagatattcgccgctcacggaatcgcacttacagcagcagctca
gccagcagtgtgaccagcctggatggccctcgagtaaggatggatgtggagcgtaccaag
tggcctcacgctgagcctcagcacaaagagggggttgctacaagcggagcaggacggaga
agtcatttaaaaagctggacaaccaatggggaatcatccacagagtcaatggaagggagt
gagatgagtgacaaagcagaagagaggaaaagaagaggtggcagggaagaactaagtgct
gagaggcagagggtagagaggagcaaaccaaagggaaccagagggggagataggggaatc
cttagggtctctctagaaaaactgccaggtaccccatcacatgttgccgtatcacaacat
cgcgggccaggcttggttccccggggcagaggggggggtatcctgatacttcctgctcgc
acagacatctctaactctcctgaggtcgggcagaggcttctttttggtggtatcagggga
gggggagctgccagaagtagaggaggccgaggaggaggaggaggaggaggagcgaggcga
ctctgggatccaaacaaccccgaccagaagccagctcttaccgcgacccagtcctcgcag
cattcatctcgccagcagcctgtatatcttcagacaggggctggaatcggtcaacttcac
ttcctggacacagacgatgaggtggcaggaagtcctccggtggcgcagggtgatcacttt
cgagcccagcaggtcgctgccatggccttttacaaattccaaaactctgacaacccttac
ggccaccccgtgccggccagcaactcacacagtcctggcagcaccgccagctatgcatac
ccttatcaaatgggaccctaccaaatggctcccgctaatggtatgtaccctgtgggtcaa
ttctgtgggagttacaggggagcagggtatccccagcctgttgcaggaggtagtttgaca
tcggaagaggtggagcaacaagccagaggggagctggggaggatgctgagggctgcggac
gcacaggagcttcagctcagcaacctgctgtcccgggacagagtgagtgctgagggactg
gaacgcatggcccagctcagagctgacattttggggctctatgagcaggtcctcctgaca
gacatcgactactctgactcgcagaacgtggatcaagctctgtggaagaatgtcttttac
caggtcatagagcgcttccggcagctcctcaaagaccccgcctatgacaacacacctcat
gtaaagaacatgctgctcatactgctcgatgagggggcccttttctttgacgcgctacta
cagaagctgcagacggtataccagtttaagttacaggattacatggatgggatagctatc
agggctcggccattgcgtaaaacggtgaagtatgcacttatcagtgctcagcgctgcatg
atttgtcagggagatatagcgcgttaccgggaacaggccagtgactcggccaactacggc
aaggctcgcagctggtacctgaaggcccagcagatcgcccccaaaaatggacgaccatat
aaccagctggccctgctggccgtttatacaaacaggaagttggatgctgtgtattattac
atgcgcagcttggcagtttccaaccccatcctgactgcaaaggagagcctgatgagtctc
tttgaagaagctaagcgcaagatcgagcagcttgagcgaaggaggagacaggagcacgaa
ggaggctccaggggcccggcagttaaaggaagagggcgaggggaggatggagcccgcgtg
gagatctggattcgccccagcggacaggcggcgaccccgtcctctcagagaggcggcagt
gaatccagcagagactcggaacaggacggagagctgggcagtctcagcgctagtgatcta
aataagagagtcaatctgagcttcctgcatgcacatggaaagctcttcaccaaagtggga
atggagtccttccccggaatggccacccgtgttctgctggagtttaagacgctgcttcag
cacagcccttcactactgggcagcacgcacatgctgcagatcatcaccatcaacatgttc
acaatacacaacgcccacagccgagctgaagacaaggaggtgcggtccgttttacaggag
cagagcaccgccctgggtctgggcatgtttgctctgctggtgcagcgctgcaccgagctg
ctgaaagaaactcctacagaaccagtccccatggcagatggagaggaagagggtaaaggg
gaggagcttgagggtatggtgagggtctctgccttctcattggacctcagagagctgctg
ccaagtatcaaggtgtggtctgactggatgttgggacagccagaccagtggaacccacca
ccgtgcagcatagatggcagccctgatgtgtggcagggcctggctgacctgtgcaacatg
ctagcccgtgtggaccatgaggaggtgccgctgtacaaagccgacactgaagaagttgat
ggcgatgaggagctgaccgtgctgcagttgaaggaggaccggctgctggctggctttgtc
ccgctgctcgctgcaccacaggagccttgctacacagacagacacactgacgtggcaata
gcagcagattgtaagagagtgacggtgctgaagtactttctggaggctttgtgtggacag
gaagagcctctgttggccttcaagggaggcgaatacatctctgtggcaacttctcctcca
cttaaccactccaagaatacaaagagcaggcaggactctctgacagagaaagaggctgat
gatgtcataattgaggcagagtcgtctctctcggcatcagagggagaggaggatgccgaa
gatgtgggagacagtgagaatgacatcagagaactgaaggcgcgacgccatgttctcacc
aacaaactggcacagcaacagaagcgcagggataaaatacaggcggtgctgcagacaggc
gggcagttggagctggaagtgaggcctcggtttttggttccagataccaacggattcatt
gatcacttaggaggcttgaagagagtccttcagtgtggaacatacattatagttgtgcca
ctcatcgtgattacagaattagatggcttggctaaaggccaggacaactttgcgggagga
atgggaccaggagggcgcaccactggtggccgtggcaactataatgttaatacagcccat
gtgcgggccgtgcaggagaaggcccggctggcggtgagtttcctagagaaaggtttcgaa
gccagggagccgtgtctcagagctctgaccagcagagggaaccagctcgagtctatctcc
ttccgcagtgaagacacctctggacagcagggtaccaatgacgatgtgattctgtcctgc
tgcctcaactactgcaaagacaaggccaaagatttcatgcctgatcagagaaacgggaca
gtgaagctccaaagggaagtggtgctccttacagatgaccgtaacctgcgcgtcaaagct
ttgacccgcaacgtcccagtgcgagacatccctgctttcctcagctgggccaaagtgggc
tga
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integrated database retrieval system
