Gymnodraco acuticeps: 117534956
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Entry
117534956 CDS
T09661
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04010
MAPK signaling pathway
gacu04137
Mitophagy - animal
gacu04141
Protein processing in endoplasmic reticulum
gacu04210
Apoptosis
gacu04217
Necroptosis
gacu04621
NOD-like receptor signaling pathway
gacu04622
RIG-I-like receptor signaling pathway
gacu04920
Adipocytokine signaling pathway
gacu05132
Salmonella infection
gacu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117534956
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117534956
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117534956
09143 Cell growth and death
04210 Apoptosis
117534956
04217 Necroptosis
117534956
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117534956
04622 RIG-I-like receptor signaling pathway
117534956
09152 Endocrine system
04920 Adipocytokine signaling pathway
117534956
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117534956
09171 Infectious disease: bacterial
05132 Salmonella infection
117534956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117534956
04121 Ubiquitin system [BR:
gacu04121
]
117534956
Enzymes [BR:
gacu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117534956
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117534956
Ubiquitin system [BR:
gacu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
117534956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-RING_4
zf-C3HC4_2
MATH
Sina_ZnF
zf-RING_5
zf-C3HC4_4
DUF5798
zf_C2HC_14
Motif
Other DBs
NCBI-GeneID:
117534956
NCBI-ProteinID:
XP_034055128
UniProt:
A0A6P8SW60
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MAAQEPSPPSTLEGNKPGFPKKILANNLDDEHLCNSCQKILRRPLQAQCGHRFCSFCFNK
IVSSGPQKCSACIKEELFEEPTSILKQGGAFPDNAARREVEALAAVCPNERCTWTGTIKE
FEACHEGNCDFMIILCPSCKELMRANEQERHIERECPEKTLNCKYCKEPFLLKNIKAHDE
ICPKYPLICEGCAKKKIPRGKYVDHIKFCSKFKAPCRFHVVGCDTSVEKEKIHDHERQCS
YEHLNMLLHFIMGIKVSLESLQPQSLEAANHKLQELHQSLRELELQMSQLVGGGGLAASV
QGACAPTLAPSCTPLPNGVEAALELQLQSEKAKVLELSRRCQELELKVSTFENIVSVLNR
EMERSCTIVEAYNRQHRLDQDKIEILNNKVRQLERTVSLWDLSIVEMEGKMREMSAATYD
SIFVWKISDFTKKRQDAVGGRAPAMFSPAFYTSKYGYKMRLRIYLNGDGTGRGTHLSLFF
VVMRGNSDPLLKWPFNQKVTLMLLDQNSREHIIDAFRPDVSSSSFQRPVSGMNIASGCPH
FCPLSKLDSKNSYIRDDTIFIKAIVDLTGL
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacaggagccgtctccaccgtccaccctggaaggcaacaaaccgggctttcca
aagaaaatcctagctaacaacctggatgacgagcatttgtgcaattcgtgccagaaaatc
ctgaggaggcccctgcaagctcaatgtggtcaccgcttttgttcgttctgcttcaacaaa
atcgtgagttctggacctcagaaatgcagcgcttgcatcaaagaagaattgtttgaagag
cccacctccattctcaagcaaggcggtgcctttcctgacaacgcagcgcggagagaggtt
gaggccttggcagctgtctgtcccaacgaaagatgcacgtggacgggaactatcaaagag
tttgaggcctgccatgagggaaactgtgacttcatgatcatcctgtgtccctcctgcaaa
gagctgatgagagccaacgagcaggagcggcacatcgagagagaatgccccgagaagacg
ctcaactgcaaatactgcaaagagcccttcctgttaaagaacatcaaggctcatgatgag
atctgtccaaagtacccgctgatctgtgaaggctgtgcaaagaaaaagatccccagagga
aagtatgtggaccatattaaattctgcagtaaatttaaagcaccatgccgattccatgtt
gttggctgcgatacgtctgtggagaaagagaagatccatgaccatgagaggcagtgctca
tacgaacacctcaacatgctcctgcatttcatcatgggcatcaaggtgagcctggagagc
ctgcagccccagagcctggaggccgccaaccacaagctgcaggagctgcaccagtccctc
cgggagctggagctccagatgagccagctggtggggggaggggggttggcggcctccgtg
cagggtgcctgcgcccccaccctggccccctcctgcaccccgctgcccaacggcgtggag
gctgctctggagctgcagctccagagcgagaaggccaaggtgttggagctgagccgccgc
tgccaggagctggagctcaaagtcagcacgttcgagaacatcgtgagcgtcctcaaccga
gagatggagcgctcctgcaccatcgtggaggcctacaaccgccagcacagactggaccag
gacaagatcgagatcctcaacaacaaggtccgtcagctggagaggacggtgagtctgtgg
gacctgtccatcgtggagatggaggggaagatgagggagatgtctgcggccacatacgac
agcatctttgtgtggaagatctccgacttcaccaagaagaggcaggacgccgtgggcggc
cgcgcccccgccatgttctcccccgctttttataccagtaaatacggctacaagatgcgc
ctgcggatctacctgaacggcgacgggacgggccgggggacgcacctctcactcttcttc
gtggtgatgagaggaaacagtgacccactcctcaagtggcctttcaaccagaaggtcacc
ctcatgctgctggaccagaacagcagggagcacatcatcgatgccttccggcccgacgtc
tcctcctcgtccttccagaggcccgtcagcggtatgaacatcgccagcggctgcccgcac
ttctgcccactctccaagctggactccaagaactcctacatacgtgacgacaccatcttc
atcaaggccatcgtcgacctcactgggctctag
DBGET
integrated database retrieval system