KEGG   Gymnodraco acuticeps: 117534956
Entry
117534956         CDS       T09661                                 
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
gacu  Gymnodraco acuticeps
Pathway
gacu04010  MAPK signaling pathway
gacu04137  Mitophagy - animal
gacu04141  Protein processing in endoplasmic reticulum
gacu04210  Apoptosis
gacu04217  Necroptosis
gacu04621  NOD-like receptor signaling pathway
gacu04622  RIG-I-like receptor signaling pathway
gacu04920  Adipocytokine signaling pathway
gacu05132  Salmonella infection
gacu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gacu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117534956
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    117534956
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    117534956
  09143 Cell growth and death
   04210 Apoptosis
    117534956
   04217 Necroptosis
    117534956
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    117534956
   04622 RIG-I-like receptor signaling pathway
    117534956
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    117534956
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117534956
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117534956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gacu03019]
    117534956
   04121 Ubiquitin system [BR:gacu04121]
    117534956
Enzymes [BR:gacu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117534956
Messenger RNA biogenesis [BR:gacu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     117534956
Ubiquitin system [BR:gacu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    117534956
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-RING_4 zf-C3HC4_2 MATH Sina_ZnF zf-RING_5 zf-C3HC4_4 DUF5798 zf_C2HC_14
Other DBs
NCBI-GeneID: 117534956
NCBI-ProteinID: XP_034055128
UniProt: A0A6P8SW60
LinkDB
Position
Unknown
AA seq 570 aa
MAAQEPSPPSTLEGNKPGFPKKILANNLDDEHLCNSCQKILRRPLQAQCGHRFCSFCFNK
IVSSGPQKCSACIKEELFEEPTSILKQGGAFPDNAARREVEALAAVCPNERCTWTGTIKE
FEACHEGNCDFMIILCPSCKELMRANEQERHIERECPEKTLNCKYCKEPFLLKNIKAHDE
ICPKYPLICEGCAKKKIPRGKYVDHIKFCSKFKAPCRFHVVGCDTSVEKEKIHDHERQCS
YEHLNMLLHFIMGIKVSLESLQPQSLEAANHKLQELHQSLRELELQMSQLVGGGGLAASV
QGACAPTLAPSCTPLPNGVEAALELQLQSEKAKVLELSRRCQELELKVSTFENIVSVLNR
EMERSCTIVEAYNRQHRLDQDKIEILNNKVRQLERTVSLWDLSIVEMEGKMREMSAATYD
SIFVWKISDFTKKRQDAVGGRAPAMFSPAFYTSKYGYKMRLRIYLNGDGTGRGTHLSLFF
VVMRGNSDPLLKWPFNQKVTLMLLDQNSREHIIDAFRPDVSSSSFQRPVSGMNIASGCPH
FCPLSKLDSKNSYIRDDTIFIKAIVDLTGL
NT seq 1713 nt   +upstreamnt  +downstreamnt
atggctgcacaggagccgtctccaccgtccaccctggaaggcaacaaaccgggctttcca
aagaaaatcctagctaacaacctggatgacgagcatttgtgcaattcgtgccagaaaatc
ctgaggaggcccctgcaagctcaatgtggtcaccgcttttgttcgttctgcttcaacaaa
atcgtgagttctggacctcagaaatgcagcgcttgcatcaaagaagaattgtttgaagag
cccacctccattctcaagcaaggcggtgcctttcctgacaacgcagcgcggagagaggtt
gaggccttggcagctgtctgtcccaacgaaagatgcacgtggacgggaactatcaaagag
tttgaggcctgccatgagggaaactgtgacttcatgatcatcctgtgtccctcctgcaaa
gagctgatgagagccaacgagcaggagcggcacatcgagagagaatgccccgagaagacg
ctcaactgcaaatactgcaaagagcccttcctgttaaagaacatcaaggctcatgatgag
atctgtccaaagtacccgctgatctgtgaaggctgtgcaaagaaaaagatccccagagga
aagtatgtggaccatattaaattctgcagtaaatttaaagcaccatgccgattccatgtt
gttggctgcgatacgtctgtggagaaagagaagatccatgaccatgagaggcagtgctca
tacgaacacctcaacatgctcctgcatttcatcatgggcatcaaggtgagcctggagagc
ctgcagccccagagcctggaggccgccaaccacaagctgcaggagctgcaccagtccctc
cgggagctggagctccagatgagccagctggtggggggaggggggttggcggcctccgtg
cagggtgcctgcgcccccaccctggccccctcctgcaccccgctgcccaacggcgtggag
gctgctctggagctgcagctccagagcgagaaggccaaggtgttggagctgagccgccgc
tgccaggagctggagctcaaagtcagcacgttcgagaacatcgtgagcgtcctcaaccga
gagatggagcgctcctgcaccatcgtggaggcctacaaccgccagcacagactggaccag
gacaagatcgagatcctcaacaacaaggtccgtcagctggagaggacggtgagtctgtgg
gacctgtccatcgtggagatggaggggaagatgagggagatgtctgcggccacatacgac
agcatctttgtgtggaagatctccgacttcaccaagaagaggcaggacgccgtgggcggc
cgcgcccccgccatgttctcccccgctttttataccagtaaatacggctacaagatgcgc
ctgcggatctacctgaacggcgacgggacgggccgggggacgcacctctcactcttcttc
gtggtgatgagaggaaacagtgacccactcctcaagtggcctttcaaccagaaggtcacc
ctcatgctgctggaccagaacagcagggagcacatcatcgatgccttccggcccgacgtc
tcctcctcgtccttccagaggcccgtcagcggtatgaacatcgccagcggctgcccgcac
ttctgcccactctccaagctggactccaagaactcctacatacgtgacgacaccatcttc
atcaaggccatcgtcgacctcactgggctctag

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