Gymnodraco acuticeps: 117536182
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Entry
117536182 CDS
T09661
Name
(RefSeq) short transient receptor potential channel 3-like
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117536182
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gacu04040
]
117536182
Ion channels [BR:
gacu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117536182
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank_4
Ank
Ank_5
YVC1_C
DUF2516
Motif
Other DBs
NCBI-GeneID:
117536182
NCBI-ProteinID:
XP_034056845
UniProt:
A0A6P8TGN3
LinkDB
All DBs
Position
Unknown
AA seq
900 aa
AA seq
DB search
MNQDPPLWISSRMNHRPPLSSRPAVCSDSPRARSRDNLLVCKDFGEENCCSGRCLGHSSS
ERQLVAPLGAVKRRQALRGPTYMFSAPSISPSEVEQRFLEAAEYGNIPEVRRMMLHLPHL
NVNAVDYMGQNALQLAVSNEHLEVTELLLGRADLARVGDALLLAISKGYVRITEALLCHP
AFRDAHRLTGSPAQADMLDDFYAYDEDGTRFSHDVTPVILAAHCQEYEIVHTLLSKGAHI
DHPHDYFCGCDSCNYQQQFDSFSHSRSRINAYRGLASPAYLSLSNEDPVLAALELSSELA
MLANIEKEFKNDYCCLSTQCKDYVVGLLDLCRSTEEVEAILSGETDSEDNYDLPGRPSLT
RLKLAIKYELKKFVAHPNCQQQLLSIWYENLPGLRQQTTATKLLVVLAVAIGLPGLAVAY
LVAPCSRVGKVMRSPFMKFVAHASSFTIFLGLLIMNAADRFAGATLLANMTHHDLQGEHN
LNSDPLMLYRMTTSPFTWMEILIISWVMGMIWTEVKEIWSQGPGEYFVEPWNFLDFGMLA
IFLASFSCRLSTLRHADLAQTYVHTHYTTLINVTLPPEINYFTLARIYWVPSDPQLVSEG
LYAVAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFILVFLAFMIGMFNLYS
YYLGAKQNDAFTTLEESFKTLFWAIFGLSEVKSVVINNGHKFIENIGYVLYGVYNVTMVI
VLLNMLIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSMLGLA
TGIKSLLQLLQQYVAGHSEEKNETQLNQLGEVKSSGFDGSTSSSRYQKIMKRLIKRYIIK
AQADKESDEITEGELKEIKQDISSLRYELLEEKSQNTETLEGLLRRLAEISTPSATLPVS
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaccctccactgtggatctcctccaggatgaaccacagaccgcccctcagc
agccggccggcggtctgcagcgacagcccccgggcccgcagccgggataacctgctggtg
tgcaaggacttcggagaggaaaactgttgctctggacgatgccttggccacagcagctca
gagagacagctcgtggcccctctcggtgcagtgaaacgacgccaggcgcttcgtggtcca
acctacatgttctctgctccctccatcagcccgtcagaggttgagcagcgcttcctggag
gcggctgagtacggcaacataccagaggtgcggcgcatgatgctccacctgccacacttg
aacgtcaacgctgtggactacatgggccagaatgcattgcagctggctgtgtctaacgaa
catctggaggtgacggagctgctgctggggagggcggatctggccagagtgggtgacgcc
ctcctgttagccatcagtaaaggttatgttcgtatcacagaggccttgttgtgtcaccct
gcgtttagagatgcccatcgtctgacagggagccccgctcaagcagacatgttggacgac
ttctacgcttacgatgaggacgggacgaggttctctcatgacgttactccagtgatcctt
gcagcgcactgccaagagtatgagattgttcacaccctgctgagtaaaggggctcacatc
gatcatcctcacgattacttctgcggctgcgactcctgtaactaccagcagcagtttgac
tccttcagtcactcgcgatcgcggatcaatgcctacagaggcctcgccagccctgcctac
ctctccctgtccaacgaggacccggtgctggccgccctggagctcagcagcgaactggcc
atgctggctaatattgagaaagaattcaagaacgactactgttgtctgtccacccagtgt
aaggactatgtggtcggcctcctggatctgtgccgcagcactgaggaggtggaggccata
ctgagcggagaaactgactctgaagacaactacgatctaccaggtcgcccctccctcaca
cggctcaaattagccatcaaatacgaactcaaaaagtttgtggctcatcctaactgccag
cagcagctgctgagtatctggtatgagaatctgcccggcctgagacaacaaaccactgcc
accaaactgctggtggtgctggccgtggcgataggactgcctggactggctgtggcttac
ctggtcgctccgtgcagcagagtggggaaagtgatgcgtagccccttcatgaaatttgtg
gcccacgcctcatcttttactatttttctgggtcttctgatcatgaacgctgctgaccgt
ttcgcaggcgccaccctgttggcaaatatgacccaccatgatctccaaggagaacacaat
cttaactctgacccgctgatgctctaccgcatgaccacctcacccttcacatggatggag
atcctcatcatttcatgggtcatgggtatgatctggactgaggtgaaggagatctggagt
caaggcccaggggagtatttcgttgaaccgtggaacttcctggactttgggatgctggca
atcttcctcgcctccttcagctgccgtttatccaccctgagacacgctgacttagcccag
acctatgtacacacacactacacgacactgattaatgtcacactgccccccgagataaac
tactttacactggcacgtatatactgggtgccttcggatccccagctggtatcggagggt
ctgtacgcggtggccgtggtgctgagcttctctcgcatcgcttacatcctaccggccaat
gagagcttcggtccactgcagatctctctggggaggactgtcaaggacatcttcaagttc
atggtcatcttcatcctggtctttctggcgttcatgattggcatgttcaacctgtactcc
tattaccttggggcaaagcagaatgatgccttcaccaccttggaggagagtttcaagacg
ttgttctgggctatttttggactgtctgaggtcaaatctgtcgtgatcaataacgggcac
aaattcatcgagaacattggttacgtgctgtacggggtttacaacgttaccatggtgata
gtactgctcaacatgctcatcgccatgatcaacagctccttccaggagatcgaggatgat
gctgatgttgagtggaagtttgctcgggccaaactctggttctcttactttgaggaggga
aggacgctcccagtacctttcaacctggtccccagtccaaagtccatgctgggactggct
acaggcatcaagtccctgctgcagctgctccagcagtatgtggcaggacacagtgaggag
aaaaatgagacacagttaaatcagctcggagaagtaaaaagttctggatttgatggatca
actagctcatccagatatcagaagatcatgaagcgtctaataaagcgttatatcatcaaa
gcccaagcagacaaagagagtgacgagatcactgaaggcgagcttaaagagatcaagcag
gacatctccagtctgcggtatgagctgctggaggagaaatctcaaaacacagagacactg
gaaggtctgctgaggaggctcgcagagatcagcacaccttcagcaacactgccagtatcc
tag
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