Gymnodraco acuticeps: 117538173 Help Entry 117538173         CDS       T09661                                  Symbol traf2b Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism gacu  Gymnodraco acuticeps Pathway gacu04010   MAPK signaling pathway gacu04137   Mitophagy - animal gacu04141   Protein processing in endoplasmic reticulum gacu04210   Apoptosis gacu04217   Necroptosis gacu04621   NOD-like receptor signaling pathway gacu04622   RIG-I-like receptor signaling pathway gacu04920   Adipocytokine signaling pathway gacu05132   Salmonella infection gacu05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:gacu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     117538173 (traf2b)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     117538173 (traf2b)  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     117538173 (traf2b)   09143 Cell growth and death    04210 Apoptosis     117538173 (traf2b)    04217 Necroptosis     117538173 (traf2b)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     117538173 (traf2b)    04622 RIG-I-like receptor signaling pathway     117538173 (traf2b)   09152 Endocrine system    04920 Adipocytokine signaling pathway     117538173 (traf2b)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     117538173 (traf2b)   09171 Infectious disease: bacterial    05132 Salmonella infection     117538173 (traf2b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:gacu03019]     117538173 (traf2b)    04121 Ubiquitin system [BR:gacu04121]     117538173 (traf2b) Enzymes [BR:gacu01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      117538173 (traf2b) Messenger RNA biogenesis [BR:gacu03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      117538173 (traf2b) Ubiquitin system [BR:gacu04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     117538173 (traf2b) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-C3HC4_4 zf-RING_5 zf-C3HC4_3 zf-RING_6 zf-C3HC4_2 Paramyxo_NS_C zf-RING_2 Mcp40H-20_sensor Sina_ZnF Motif Other DBs NCBI-GeneID:  117538173 NCBI-ProteinID:  XP_034059626 UniProt:  A0A6P8T7L0 LinkDB All DBs Position Unknown AA seq 520 aa AA seqDB search MAYISMDCPSSLPGIPQSVLSVPMENKYKCQQCHQVLRKPVQAQCGHRFCVHCFKQLTSS GPKPCEACREEEIYEEPFSILNSNEAFPDNAAGREIASLPARCLNEGCDWTGSIKEYEAQ HEGRCEFERVKCEACQNTILLSEKDKHNERECEERTLNCKYCKTSFNFKEIKAHDEICPK FPLQCKDCGKKKIPREKFSDHSKSCAKSKSACPFSDVGCKHVIENGKQSDHEHSSTMEHL RLLLPMVLSIAVPPSDASGPGEWQEDSGLGLYRAPEEGVSMGSGAAASSQSMDLDKKVKA LENIVCVLNREVERSAVTLEAFAHQHRLDQDKIENLSSKVRQLERTIDMRDLKLSETEQL VRELQFCTFDGIFVWKISDFSRRRQDAVASRTPAMFSPAFYSSKYGYKMCLRLYLNGDGT GRGTHLSLFFVVMRGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSTSFQRPIS EMNIASGCPLFCPLARLAGKSPYLRDDTIFIKAIVDLTGL NT seq 1563 nt NT seq  +upstreamnt  +downstreamnt atggcctacatctcgatggactgccccagctctttaccagggattcctcaaagtgtgctg tcagtgcccatggagaataagtacaaatgtcagcagtgtcaccaggtcctgaggaagcct gtccaggcccagtgcggacatcgcttctgtgtacactgcttcaagcagctcaccagttct ggcccaaagccttgtgaagcctgtcgcgaagaggagatatacgaggaaccattttcgatt ctaaatagtaatgaggcatttccagacaatgcagcaggacgagaaatagcaagcctgcct gccaggtgtctgaacgaaggctgtgattggacaggctccataaaagagtatgaggctcag catgaaggccgttgtgaatttgagcgggtaaagtgcgaggcctgccaaaacacgatcctt ctttcggagaaggacaaacacaatgagagagaatgtgaagaaagaacgctaaactgcaaa tactgcaaaacatccttcaactttaaagagatcaaggcccatgatgagatctgtccaaag tttcccttacaatgcaaagactgtggcaagaagaagatcccaagagaaaagttcagtgac cacagcaaatcctgtgccaagtcaaagagtgcctgtcccttcagtgatgtgggctgtaaa catgtgatagagaacgggaagcagagcgaccatgagcacagcagcaccatggagcacttg cgtctgctgctgcccatggtgctatccatcgccgtgccgcccagcgatgcttccggtccc ggagagtggcaggaggactcaggtctgggcctgtacagggcccctgaggagggggtcagt atgggctctggagctgcagcctccagtcagtctatggacctagataaaaaggtaaaagct ttggaaaacattgtgtgtgtcctgaaccgagaggtagagcgcagtgcagttactttagag gctttcgcacatcaacatcgtttagaccaggacaaaatagaaaatctctccagtaaagtg cgtcagctggaacggacaatcgacatgagggacttgaaactgtcggaaactgagcaactg gtgcgggaacttcagttctgcaccttcgacgggatctttgtgtggaaaatctccgacttc tcacgccgcagacaggacgccgtagccagtcgaacacccgccatgttctctccagcattt tattccagcaaatacggctacaaaatgtgtctgaggctgtatttgaatggcgacgggacg ggtcgagggactcacctttcgctgttctttgtcgtcatgaggggaaagtgcgacgctctc ctcaaatggcccttcagtcagaaggtgacgctgatgctcttggatcagaacaacagggag cacatcatcgacgccttccggcccgacgtcacctccacctccttccagcggcccatcagt gagatgaacatcgccagcggctgcccgctcttctgcccgctcgccaggctggccggcaag agcccctatctgagggacgataccatcttcatcaaggccatcgtggacctcacaggcttg tag

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