Gymnodraco acuticeps: 117545135
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Entry
117545135 CDS
T09661
Symbol
irf3
Name
(RefSeq) interferon regulatory factor 3 isoform X1
KO
K05411
interferon regulatory factor 3
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04620
Toll-like receptor signaling pathway
gacu04621
NOD-like receptor signaling pathway
gacu04622
RIG-I-like receptor signaling pathway
gacu04623
Cytosolic DNA-sensing pathway
gacu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117545135 (irf3)
04621 NOD-like receptor signaling pathway
117545135 (irf3)
04622 RIG-I-like receptor signaling pathway
117545135 (irf3)
04623 Cytosolic DNA-sensing pathway
117545135 (irf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117545135 (irf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gacu03000
]
117545135 (irf3)
04131 Membrane trafficking [BR:
gacu04131
]
117545135 (irf3)
Transcription factors [BR:
gacu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117545135 (irf3)
Membrane trafficking [BR:
gacu04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
117545135 (irf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
117545135
NCBI-ProteinID:
XP_034070709
UniProt:
A0A6P8U1V3
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MSKPLLIPWLRTKINSGQCDGVQWTNPEQTEFSVPWKHALRQDSSNTDILIFKAWAETSG
NGRAHGDHSVWKRNFRSALRAKGFKLISDNKNDGANPHKVFRWPETSASGANSAAGSQEQ
DDPDLSEYFPLPTQESQVVPNFEDYLYLPEDTVFSAEHPDHHDILQECLMGLNIGPDTEG
TAGFELPPEQQQLQNPAVIGGHALPGQQQFPVMYEGEAGLPEQPAGPIEGAVGGAYDGQF
AEQFKHSVNNTRDGEHFKTHFRISVYYRGVKVLDQLVDNEVGIRLVYRPQLTGTVLDPGS
GLSLVSLPSPGAILDQTQANLTQRILDKLGEGLDVGMSGSVVYGQRRGEIKAFWSRSKFD
ESRQPQEISKLQPQPLYMFKEFIQGILNFINGKESPPSSLFFCLGEKWPDKDNRPWDRKL
ITVEVVLTSMEELKNMAVGGGASSLQSVELQMSLEEMMDLY
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaccgctgctgataccgtggctgcggaccaagattaacagcggccagtgtgac
ggtgtccagtggaccaacccggagcaaacagagttctccgtcccatggaaacacgcttta
agacaggactcctccaacacggacatcctcatctttaaggcctgggcagagacgagtggc
aatggccgagctcacggagaccattcagtctggaagaggaacttccgcagcgccctccga
gcaaaaggcttcaaactgatctcagacaacaagaacgacggcgctaacccccacaaagtg
tttcgctggccggagacgtcagcttcaggagctaactctgctgctggatcccaggaacaa
gatgatcccgatttgtctgaatatttcccccttcctacacaagagagccaggtcgtccca
aacttcgaagactatctctatcttccagaagacactgtgttttcagcagaacaccccgac
catcatgatattctgcaggagtgtctgatgggactgaacattggcccggacacagagggc
actgcaggctttgagcttcctcctgagcaacagcagctccagaacccggctgtgattggt
ggacatgcgttgcctgggcaacagcagtttccagtgatgtatgagggtgaagctgggttg
cctgagcaaccggcaggaccaatagagggagctgtaggcggggcttatgacgggcagttt
gctgagcagttcaaacattctgtgaacaacaccagagatggagaacatttcaagacacat
ttcaggatatccgtgtactacagaggggtgaaggtgttggatcagctggttgacaatgaa
gttggaatccgcttggtctacaggcctcaactcacagggacagttttggatcccgggtcc
ggcctgtcgctcgtctctctgccaagtcccggagccatcctggatcaaacccaggccaac
ctgacccagcgcatcctggacaagctgggcgagggtttggacgtcggaatgtcgggcagt
gtggtctacggccagcgacggggtgaaatcaaagcattttggagccgctccaaatttgac
gagagcagacagccgcaagagatttctaaactacagcctcaaccactgtacatgttcaag
gaatttatccaaggtatattgaacttcataaatgggaaggaatcccctcccagctccctg
ttcttctgcctcggggagaagtggccggataaagacaacaggccttgggataggaaactc
atcacagtggaggtggtcctgacttcgatggaggagctgaaaaatatggctgttggaggc
ggcgcctcctcgctgcagtctgtggagctgcagatgtccctggaggagatgatggacctg
tactga
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