Gymnodraco acuticeps: 117547391
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Entry
117547391 CDS
T09661
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gacu04040
]
117547391 (scn4aa)
Ion channels [BR:
gacu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
117547391 (scn4aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
117547391
NCBI-ProteinID:
XP_034074000
UniProt:
A0A6P8UPJ6
LinkDB
All DBs
Position
Unknown
AA seq
1904 aa
AA seq
DB search
MAPLLPPRGTNAFRPFTRELLAEAERLKEERQKADVEGHDEEEPTAPNADLEAGKSLPMI
FGDPPSELLNTPLEDLDPFYKAQNATFIVITKGNTIYRFNAEPACYILSPFSLVRRGAIK
ILIHSLFSMFIMLTIVLNCAFMTLSNPPAWSKTVEYVFTGIYTFEATIKVLGRGFCAGSF
TFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVAALIQS
VKKMVDVMILTVFALAVFALIGLQLFMGNLRQKCVRWPIETNETAYDFFNTTAQFNDTMF
FNNTVGVNNTSYYNSTFNFNEYIENTDNQYYLEGSLDALLCGNSSDAGKCPEGYTCMKAG
RNPNYGYTSFDSFGWAFLALFRLMTQDYWENLFQLILRAAGKTYMLFFVVIIFLGSFYLI
NLILAVVAMAYEEQNQATQREAIEKEEEFQRLLEQIRNQEEQAMGLGSQVSLTSKKSLSH
HTISEVADDEQILEHDEIIKDCSGRIIPRLLVRAPTLVKCASVYELEEKSLGSDHSMLRL
EEPRLTQRAASTLSVLTAAAMEELEEAQRPCPPGWYKFADTFLKWDCSPRWILMKKWVLF
IVMDPFVDLGITICIVLNTLFMAMEHYPMTPQFDHMLSVGNLVFTGIFTAEMFFKLIAMD
PYYYFQVGWNIFDSIIVTFSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKII
GNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKECVCKISTECELPRWHMNDFFHSFLI
VFRILCGEWIETMWDCMEVAGTGMCLVVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSTD
EDGEMNNLQIAIGRITRGIDWFKAFLVRSILQIINKKPKDNEDGPNEDEDPKTEGIEINH
FDSSQHFKMADGIPNCLVECGPSGLIVDGGFSLNVPIAQGESDFENMDEDDTDDVDDTDD
VDDADDSKFSDEEHNPHYSEKYKDVHCLLGNIKLMGALNDGDSSVCSTVDYQPPEPEPEE
VEEEEPDPVEPEACFTDSCIKRWPCLTVDITQGRGKKWWNLRRACFTIVEHDWFETFIIF
MILLSSGALAFEDIYIERRRTIKIILEYADKIFTYVFIIEMLLKWVAYGFKTYFTNAWCW
LDFFIVDISLISLAASFMGFSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPS
IFNVLLVCLIFWLIFSIMGVNLFAGKFYRCINTTTSELFPMWEVNNHSDCLLLQEATQEA
RWVNVKVNYDNVGQGYLSLLQVSTFKGWMDIMYAAVDSREVEEQPSYEINLYMYIYFVIF
IIFGSFFTLNLFIGVIIDNFNQQKKKFGDKDIFLTEEQKKYYEAMKKLGSKKPQKPIPRP
TNPIQGLVFDFISQQFFDIFIMVLICLNMVTMMVETDNQSAEKEDFLFKVNVAFIVVFTG
ECSLKLIALRQYFFTNGWNVFDFVVVILSIAGTMLSDIIEKYFVSPTLFRVIRLARIGRI
LRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEAGIDDIFN
FETFGGSIICLFEITTSAGWDGLLLPMLDKEFPDCDPNFENPGTDVKGNCGNPLMSMAFF
CSYIIVSFLVVVNMYIAIILENFNVAQEESGDALCEDDFEMFNETWEKFDLDGTQFIEYS
QLSDFCDTLQPPLKVAKPNRIPLMAMDLPLVIGDRIHCLDVLMAVTQMVLGDTLEMAAMR
ESIEAKFVLSNPTSDSFAPITTTVRHKEEEMAAMVVQRAYRKHLLKRCTRHAAFMQRCKR
KGQKDEGDDPPEKEGMLARRMGVLYGSKLDLAEEMEQADIETLANQQPSNPETLSDDTES
KSDTESPEPNVIVVPVEITNEVLLHSAPDPYLFYLHANLKETIV
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccctgctccctccccgaggcaccaatgcgttccgcccctttacccgggaattg
ctggcggaggccgagaggctcaaggaggaaagacaaaaggctgatgtagaaggccatgat
gaggaagagccaacggccccaaacgctgatctggaggcaggcaagagtctgcccatgatc
ttcggagaccctccatcagagctgctcaacacacctctggaggacctggaccccttctac
aaagcacaaaacgcaacattcattgtgatcaccaaaggaaacacaatctacaggttcaac
gctgagccggcttgctacattctgagcccctttagtttggttagaagaggagccatcaaa
attctcatacattcattatttagcatgttcatcatgcttacgattgtattgaattgtgca
ttcatgacgttgagcaacccaccagcatggagtaaaactgttgagtatgtttttactgga
atctatacctttgaggcaacaatcaaagtgttgggaagaggtttctgtgctggatctttt
acattccttcgagatccatggaattggctggatttcatggtgatcagcatggcatatgtc
actgagtttgttgacctcggcaacgtgtccgcactcaggacatttcgtgtacttcgagcc
cttaaaacaattactgtgattcctggtttgaaaaccattgtggccgctttgatccagtca
gtgaagaaaatggtggacgtcatgattctgacagtctttgcccttgctgtttttgccctc
attggccttcaactctttatgggaaatctgcgtcagaaatgtgtgcgatggcccatcgaa
acaaatgaaactgcatatgatttttttaacaccactgctcaatttaatgacaccatgttc
ttcaataacaccgtgggcgtcaacaatacatcatattacaacagcaccttcaactttaat
gagtacattgaaaacacagataatcagtattatttggaaggcagcctagatgctctactt
tgtggaaacagctcagatgctggaaagtgcccagaaggatacacatgcatgaaagctggg
cggaaccctaactatggctacaccagttttgactcgtttggctgggccttcctggccctc
ttcagactcatgacccaggactactgggagaaccttttccagctgatcctgcgggcggct
gggaagacatacatgctgttctttgtggtgattatctttctgggctccttctacctcatc
aacctcatcctggctgtggtagccatggcttatgaagaacagaatcaggcaactcagcga
gaggccatcgagaaagaggaagagttccagcggctactcgagcaaatcaggaatcaggaa
gagcaggctatgggtctaggaagccaagtcagtttaactagtaagaagtcactcagtcat
cacaccatatctgaagtggcagatgacgaacaaatccttgaacatgatgaaattatcaag
gattgtagcgggagaatcattccccgtctgttggtccgagcacccactttggtcaagtgt
gcttctgtttatgagctcgaagagaagtcattaggctctgatcacagcatgcttcgtctg
gaagagccacgcctgacacagagggctgctagcactctgagtgtgctcactgcagctgct
atggaagagttggaggaggctcagaggccgtgcccacccggctggtacaagtttgcagac
actttcctgaagtgggactgctccccgcgatggattcttatgaaaaaatgggttctcttt
attgtgatggacccttttgttgacttgggcattaccatctgcattgtgctcaacaccctc
ttcatggccatggagcactaccctatgaccccacagtttgaccacatgctctcagtgggg
aatctggttttcactgggatcttcacagcggagatgttcttcaagctcatcgccatggat
ccttactactactttcaagttggctggaatatttttgacagcatcatcgtcacttttagt
ctggtggagttagggcttgcgaatgtccaaggtctgtctgtcctcaggtccttccgtctg
cttcgtgtcttcaaactagcaaagtcctggcccaccctcaacatgctgatcaagattatt
ggtaactcagtgggagctttaggaaatctgactttggtgctggccatcatcgtcttcatc
tttgccgtggtgggtatgcagctctttggcaaaaactacaaggaatgtgtgtgcaagatc
tccacagagtgcgagctgccacgctggcacatgaacgacttcttccactcattcctcatc
gtgttccgcatcctgtgcggggagtggatcgagaccatgtgggactgcatggaggtggcc
ggaactgggatgtgtttagtcgtcttcatgatggtcatggtcattggaaatctagtggtg
ctgaacctcttcctggccttactgctcagctcattcagcggagacaatctctcaacagac
gaagacggagagatgaacaatctccagatcgccattggcaggatcacacgaggcattgac
tggttcaaagcgttcctcgttcgatccatcctgcagattatcaataaaaagcccaaggac
aatgaggatggtccgaatgaagacgaggaccctaaaactgagggaattgaaattaaccac
tttgactccagtcaacatttcaaaatggctgatgggatacctaattgtttggttgaatgc
gggccttctggattaattgtggatggaggcttcagtctaaatgtgccaattgctcaggga
gagtcagactttgaaaacatggatgaggatgatactgatgatgttgatgatactgatgat
gttgatgatgctgatgactcaaagttttcagatgaagaacataatccacattattcggaa
aaatataaagatgttcattgtttactgggaaatatcaaactgatgggtgctttgaatgat
ggggattcctcagtgtgtagcacagtggactatcaaccacctgagcctgagccagaagaa
gtggaagaggaagaaccagaccccgtcgagccggaagcctgcttcactgacagctgtatt
aagcgctggccatgtctgactgtggacataacccagggtagaggcaaaaaatggtggaac
ctcaggagggcttgctttactattgtggagcatgactggtttgaaacctttataatcttc
atgatcctcttgagcagcggggctttggcatttgaagacatatacatagaaagacgccgc
accatcaaaattattctggagtatgctgacaaaattttcacctacgtctttatcatcgag
atgctccttaaatgggtcgcgtacggctttaagacctacttcaccaacgcctggtgttgg
ttagactttttcattgtagatatttccctgattagtttagctgccagctttatgggattc
tctgaccttggaccaatcaaatccctccggactctcagggccctaaggcctcttcgagcg
ctgtcaagatttgaaggcatgagggtggtggtgaacgctctcgttggtgctattccctcc
atcttcaacgtgctgctggtgtgtctgatcttctggctcatattcagcatcatgggagtt
aacctgtttgctgggaagttttaccgctgcattaataccaccacgtctgaacttttcccc
atgtgggaggtcaataaccatagcgactgcttgctcctccaagaggcaacgcaggaggcc
cgctgggtcaatgtcaaggtcaactatgacaatgtgggacaaggctacctgtcactgctt
caagtgtcaacttttaaaggctggatggacatcatgtatgctgctgttgactcaagagag
gtagaggagcagccttcttatgagatcaacctctacatgtacatttactttgtcatcttc
atcatctttggctctttcttcacactcaacctctttattggtgtcattattgacaatttc
aaccaacaaaagaaaaagtttggagataaagacatctttctgactgaggagcaaaaaaag
tactatgaggccatgaagaaacttggttccaagaaaccgcagaagccaattccacgtcca
acgaacccaatccagggattggtgtttgacttcattagccagcaattctttgacatcttc
atcatggtgctcatctgcctcaacatggtgacgatgatggtggagacggacaatcaaagt
gcagagaaggaagatttcctttttaaagtaaacgtggctttcattgttgtgttcaccgga
gagtgttcgttgaagctcattgccctgcgacaatacttcttcacaaacggatggaacgtt
tttgactttgttgtggtcatcttgtcaatagccggtacaatgctctccgacatcattgag
aagtattttgtgtcaccaactctgttcagagtcatcagactggccagaataggcaggatt
ctgcgtcttatcaaaggagccaagggcattcggacgcttctctttgccctaatgatgtca
cttcccgccctattcaacattggcctcttgctcttcctcattatgttcatcttctccata
tttggcatgtcaaactttgcctatgtcaaaaaggaagctggaatcgacgatatatttaat
tttgagacgtttggtggcagtattatctgcttgtttgagatcacgacctctgccggctgg
gatggacttttacttccaatgctggataaggagttcccagattgcgatccaaattttgag
aacccaggcacggatgtaaagggcaactgcggcaatccgctcatgagcatggcattcttc
tgcagctacatcatcgtctcattcttagtggtagtaaacatgtacatcgccatcatcttg
gagaacttcaacgtggcacaggaggagagcggagatgcgctctgtgaggacgattttgag
atgttcaatgaaacttgggaaaagtttgacttggacggaactcagttcattgagtatagc
cagctctcagatttctgtgataccttgcagccgccactgaaggttgccaagcccaaccga
attcccttaatggcaatggatctgcccctggtcatcggggacaggatccactgcctggat
gtcctgatggccgtcacacagatggtcttaggagacacgctggagatggcggcgatgcgg
gaaagcattgaggccaagttcgtcctcagcaacccaacctcagactcctttgcgccaatt
accacaacggtgcgccacaaagaagaggagatggccgctatggtcgttcagagggcttac
cgcaaacacctgctgaaacgctgcacgcgccatgccgcttttatgcagcgatgtaagagg
aagggtcaaaaggacgaaggtgacgatcctccagagaaagagggaatgctcgcacgaagg
atgggggtgctctatggtagcaaattggaccttgcagaggagatggagcaggctgatata
gaaactctagcaaaccaacagccttctaatccagagacactttcagatgacacagagtcc
aaaagtgacacagaatcccccgagccaaatgtaattgttgtacctgtagaaataacaaat
gaggttttattacattctgcccctgacccatacctcttttacctacatgcaaatctgaaa
gagacaattgtatga
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integrated database retrieval system
