Gymnodraco acuticeps: 117550137 Help Entry 117550137         CDS       T09661                                  Name (RefSeq) thrombospondin-1-like isoform X1   KO K16857   thrombospondin 1 Organism gacu  Gymnodraco acuticeps Pathway gacu04115   p53 signaling pathway gacu04145   Phagosome gacu04148   Efferocytosis gacu04350   TGF-beta signaling pathway gacu04510   Focal adhesion gacu04512   ECM-receptor interaction gacu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:gacu00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     117550137   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     117550137  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     117550137    04148 Efferocytosis     117550137   09143 Cell growth and death    04115 p53 signaling pathway     117550137   09144 Cellular community - eukaryotes    04510 Focal adhesion     117550137   09142 Cell motility    04820 Cytoskeleton in muscle cells     117550137  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:gacu04131]     117550137   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:gacu00536]     117550137 Membrane trafficking [BR:gacu04131]  Endocytosis   Phagocytosis    Opsonins     117550137 Glycosaminoglycan binding proteins [BR:gacu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    117550137 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 TSP1_ADAMTS EGF_CA TSP1_CFP_C cEGF EGF TSP1_CCN Motif Other DBs NCBI-GeneID:  117550137 NCBI-ProteinID:  XP_034078366 UniProt:  A0A6P8UPG5 LinkDB All DBs Position Unknown AA seq 1171 aa AA seqDB search MMLCGIFLLLMLWSCESARLAESPDDSSVYDLFDLARVSKRHNGVSIVKGADPYSPAYKV LNPDLIPQVPDSSLRDLLDSIQAERGFLLLVNLKQFKKTRGSLLTIEKNDGSGPVFEIIS NGKANTLDVVYSTVTQQQVVSIEDADLATGQWKNITLFVQDDRVQLFVGCVEINISEMDL PISQVLTPEVADIAKLRIGKGAVRDRFMGVLQNVRFVFGTTIDAILRNKGCQNGATLTDV MTLENPVNGSSPAIRTDYTGHKAKDVQSVCGFSCDDITGMFKELKGLGLVVKQLTFDLRK VSEESNLIRNQMKIRSGICIHNGIVHNDKEEWTVDGCTECTCQNSATVCRKISCPLLPCA NATVPDGECCPRCDPGDEAEDDWSPWSDWTHCSVTCGRGIQQRGRSCDRINNNCEGTSVQ TRDCYPQECDKRFKQDGGWSFWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGMDCQGDGR QTEICQKSPCPIDGSWGPWSIWDTCSVTCGGGFQTRKRLCNDPIAQYGGKECVGDATGSQ LCNKKACPIDGCLSSPCFPGAKCTSFPDGSFKCGKCPLGYTGNGVACKDIDECKAVSDAC HTHNGVHRCENTQPGYNCLPCPARFSGPQPFGRGVEQATAKKQVCKPRNPCQDGSHDCHK NANCIYLGVFSETMFRCECRPGYAGNGRICGEDSDLDGWPNTDLRCVENATYHCKKDNCP NLPNSGQEDHDKDGLGDECDNDDDNDRIPDDRDNCPKVYNPGQYDADRDDIGDSCDNCVH EANTDQTDTDNNGEGDACAIDIDGDGILNENDNCPYVYNEDQRDTDRDRVGDHCDNCPLE HNPDQIDSDSDLIGDKCDNNQDIDEDGHQNNLDNCPYIANANQADHDKDGKGDACDHDDD NDGIPDDKDNCRLAFNPDQLDSDGDGRGDICKDDFDQDNVLDIHDVCPENFAISETDFRR FQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFSAVDFSGTFFINTDRD DDYAGFVFGYQSSSRFYTVMWKQVTQTYWSHTPTRAQGYSGLTIQVVNSTTGPGEHLRNA LWHTGDTAGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRIMADSGNIY DKTYAGGRLGLYVFSQEMVYFSDLKYECRDT NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atgatgctgtgtggcatcttcttgctgttgatgctttggagctgtgaaagcgccagattg gcagagagcccagatgatagcagtgtgtatgacttatttgatctggcccgggtaagcaag agacacaatggagtgagtatagtgaaaggtgcagatccctacagccctgcatacaaagtc ctcaacccagacctgatcccccaagtccctgacagctccctcagggacctcctcgactcc atccaggctgagaggggcttcctcctcctggtcaacctgaagcagttcaagaaaacgagg ggaagccttttgaccatcgagaagaacgatggatctggacctgtatttgagatcatctcc aacgggaaggccaacactctggatgtggtctactccaccgtgacccagcagcaggttgtg tccatcgaggatgcagatttggccaccggacaatggaagaacatcaccctgtttgttcag gatgaccgggtgcagctttttgtcggctgtgtggagatcaatatatcagagatggatttg ccaatctctcaagtgctgaccccggaggtggcagacattgccaagctcaggattggaaaa ggagctgtaagggacagatttatgggagtgcttcaaaatgtgcgctttgtctttggaacc actattgatgccatactgagaaataagggatgccagaatggagctactttaactgatgtc atgaccctggaaaacccagtcaacggctccagccctgccattaggactgattacaccggg cacaaagccaaagatgtgcagtctgtctgcggcttctcttgtgacgacatcaccggcatg tttaaggagctcaagggactcggtttggttgtgaaacagctgaccttcgatctgcgcaaa gtgtctgaggaaagcaatctcatcagaaaccaaatgaaaatccgcagtggcatttgcatc cacaacggcatcgtgcacaatgacaaagaagaatggactgtggatggctgcaccgagtgc acctgccagaactctgctactgtgtgtcgcaaaatctcctgccctctgctcccatgcgcc aatgccactgtgcccgacggagagtgctgccctcgctgtgacccaggcgacgaagcagag gatgattggtccccctggtctgactggacacattgttctgtgacttgtggtcggggcatc cagcagcgcggacgttcctgtgaccgcatcaacaacaactgtgagggcacctctgtccag acccgtgactgctacccccaggaatgtgacaaacgcttcaaacaggatggtggttggagc ttctggtcaccctggtcttcgtgctctgtgacctgcggggagggggtcatcacccggata cgcctctgcaactcccccacaccccagatgggtggcatggactgccagggagatggacgt caaacagaaatctgccaaaagtccccctgtcctatcgatggaagttggggaccttggtca atttgggacacctgcagtgttacctgtggtggagggtttcagacccgcaaacgtctctgc aatgatcccattgcccaatatggaggaaaggagtgtgttggtgatgctactggttcccaa ctgtgcaacaaaaaggcctgcccaattgatggttgcctctccagcccatgctttcctggc gcaaagtgcaccagcttccccgacggctctttcaagtgcggcaaatgtcctcttggctat actgggaatggcgtcgcttgcaaagacattgatgagtgtaaagcagtctctgatgcttgc cacacacataacggagtccatcgctgtgaaaacactcagcctggttataactgtctgccc tgccccgcccgcttctccggtccccagccttttggaagaggggtggaacaggcaactgct aagaaacaggtttgcaaaccccgtaacccttgccaagatggtagccacgactgccataaa aatgcaaactgcatttacttgggcgtcttctccgagaccatgttccgctgcgagtgcagg ccaggttacgccggaaatggcagaatttgcggagaggacagtgatcttgatggatggccc aatactgacctgcgttgtgtggagaacgccacctaccactgcaagaaggataactgcccc aacctccccaactctggacaggaagatcatgacaaagatggtctgggtgatgaatgtgac aatgatgatgacaatgataggatccccgatgatagggataactgcccaaaagtgtacaac cccgggcagtatgacgcagacagagatgacattggcgacagctgtgacaactgtgtgcac gaggcgaacactgaccaaaccgacactgacaacaatggagagggtgatgcctgtgctatt gacattgatggcgatggcattctgaacgagaacgacaactgcccatatgtttacaacgag gaccagagagataccgacagggacagggtgggagaccattgtgacaactgccctctggag cacaaccctgatcagatcgactctgactcagatctcattggagacaagtgcgacaacaac caggacattgacgaggacggtcaccagaacaacttggacaactgcccctatattgccaat gccaaccaggcagaccacgacaaggacggcaagggtgacgcatgcgaccatgatgatgac aacgacggcatccctgatgacaaagacaactgtaggctggcatttaaccctgatcagctg gactctgatggtgatggccggggtgatatttgcaaagacgattttgaccaagacaatgtt ctggacatccatgacgtgtgccctgagaactttgccattagtgaaacagacttccgcaga ttccaaatggttcctctggaccccaagggcacctcacagattgaccccaactgggtggtc cggcatcagggcaaggagttggtgcagactgtcaactgcgaccctggcattgctgttggt tttgatgagttcagcgcggtggacttcagtggaacattcttcatcaacacagacagagat gatgactatgctgggttcgtgtttggctaccagtctagctcacgcttctacacagtgatg tggaaacaggtcacacagacctactggtcccacacccccacaagagctcaaggctactct ggcctgacaatccaagtggtcaactctaccaccgggcctggtgagcatctgaggaacgcc ctgtggcacaccggagacaccgcaggacaggtgcgtactctgtggcacgacccaaagaac atcggctggaaagacttcaccgcctacagatggcatctgacccacagacccaagactgga ctgataagagtggtcatgtacgaaggaaagagaatcatggctgattctggaaacatctac gacaaaacatatgctggtgggcgactcggcttgtacgtcttctctcaggagatggtttac ttctcagatctcaaatacgaatgcagagacacataa

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