Gymnodraco acuticeps: 117551559
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Entry
117551559 CDS
T09661
Symbol
kdm2aa
Name
(RefSeq) lysine (K)-specific demethylase 2Aa isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117551559 (kdm2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gacu03000
]
117551559 (kdm2aa)
04121 Ubiquitin system [BR:
gacu04121
]
117551559 (kdm2aa)
03036 Chromosome and associated proteins [BR:
gacu03036
]
117551559 (kdm2aa)
Enzymes [BR:
gacu01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
117551559 (kdm2aa)
Transcription factors [BR:
gacu03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
117551559 (kdm2aa)
Ubiquitin system [BR:
gacu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117551559 (kdm2aa)
Chromosome and associated proteins [BR:
gacu03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
117551559 (kdm2aa)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
117551559 (kdm2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JmjC
JHD
F-box
DUF7885
Cupin_8
PHD
C1_1
Motif
Other DBs
NCBI-GeneID:
117551559
NCBI-ProteinID:
XP_034080351
UniProt:
A0A6P8UU47
LinkDB
All DBs
Position
Unknown
AA seq
1321 aa
AA seq
DB search
MDESKPRCSKRLRAGTRRRYHDDGISDEEIDGRRMFDLDDKVHSERFGSDRVLRMEGKDL
TYEFVQREGLRDPILFEKPEGLGIKMPDPDFSVNDVKMFVGSRRMIDVMDVSTQKGTEMS
MAQWTRYYETPPSQREKLYNVISLEFSHTKLENLVRRPTTVDLIDWVDNMWPRHLKERQR
DSTNSITDMQYPKVQKYCLMSVEGCYTDFHIDFGGTSVWYHILRGSKVFWLIPPTPQNLE
LYENWVLSGKQGDIFLGDRASDCQRVELKQGCTFIIPSGWIHAVYTPVDTMVFGGNFLHS
FNIPSQLNICNIEDRTRVPLKFRYPFFYEMCWYVLERYVFSLTKTSYLTPEFQKHTLGIG
LKKPASSDPAIEQLKEEGEGEERDEGSSDEEFDVKLHLTPLELEGMWNLLGKLEALPSNK
KCLPAGIHNAPALITHIKALLKEHASDNPKLSYSGKPIVKWPKRPSWYQPPPPPPPPPRP
KLASTPVTPRPQKPASSMSVLRRRRVRCKRCEACMRPECGDCNFCRDMKKFGGPGKLKQT
CVLRQCLSPGLPLSAVCEICKEPNQEETGDPSLTLMECSNCAQIVHPACLTVQGEGVVNR
DLPSCWECPKCVQGITDPESSGSDEPLAAGHQQYIRPRGPLVLRLGPGPSATIGGPVGTQ
QDGEVIRCGFFTPPLPSCSSSSSLLLVAAPLPSQPISSRLQSKGDAGEGLPAKRKSSSLL
DARMAKIYRRQRHSHDGDDSASDDDDDDDDDDDEASRRRKALYARGGGHSARRGFGASRR
GLLRGGSARRGHLAAGSSSALKLKRGMGVREAGRRGRGVRLRGGSRMQRRGEESEESDDD
DDDDDDDEEEEEDSEDADKEQLPRRRRRRRQTDDEDEDSEGQDFDPEDEDMDTLEDEGEE
EDEEGRWDSDPEPPVLLVSDLNDDLLSGSYLTVTLQRPHRAKRHAGSIVPKLEAAMGVRT
AAGGAAGQQGFIQRKTALSKPSRLKSADSAADSGTPRGPGRPRMRGNHGDRGTRDHSVTS
SEEEEAAASSVPSSLSPPSLLSLPSFKDVGNESGGEKEVWVSVFQYLDRAQLLACMTVCK
AWYKWSCDKRLWSHVDVSRCSPLSNQVLAGIIKRQPASLDLSWTPLAKRQLNCLLTRLPG
LRELRVTGLSWSCLSALVSPTLPCLRLLDLRWCEGLKDAQIKEILTPPGLESSRSRLRNM
VTLRLSGLDVSESTLRLLQRHMPQLQRLDLAHCKDITDSSISLLAAAGSHSRNNLTELTL
AGCSELTDGCLSYLKRLSSLTLLDLRGCKSISRRACDAFISDLSHVALFCMMEENLIQRL
D
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatccaagccaaggtgcagcaaaaggctgcgggccggcacccggcgacgttac
catgacgatggcatctcagatgaggagattgatggaagaaggatgtttgacctggacgac
aaggttcacagtgagaggttcggctccgaccgggttctgcgcatggagggaaaagacctg
acatacgagttcgtccagagagagggcctgagggacccgatcctctttgagaagcctgag
ggactgggaatcaagatgcctgaccccgacttcagtgtcaatgatgtcaagatgtttgtt
ggcagcagacgtatgattgatgtgatggacgtgagcactcagaaagggacggagatgtcg
atggcccagtggacacgctactacgagacccccccgtctcagagagagaagctctataat
gtcatcagcctggagttcagccacacaaagctggagaacctggtcaggagacccaccacg
gtagatttgatagactgggtggacaacatgtggccccgtcacctgaaggagagacagaga
gactcaaccaactctatcactgacatgcagtaccccaaggtccagaaatactgtctcatg
agtgtggagggctgctacactgactttcacattgactttggagggacctcagtgtggtac
cacatcctccgaggaagcaaggtgttctggctgatccctcccacccctcagaacctggag
ctctatgagaactgggtgctgtccgggaagcagggagacattttcctgggagaccgagca
tctgactgccagagggttgaactgaagcagggctgcaccttcatcatcccctcaggttgg
attcatgccgtgtacacccctgtggacaccatggtgtttggaggaaacttcctgcacagc
ttcaacatcccctcgcagctcaacatctgtaacatagaggacagaacgcgggttccattg
aagttccgctaccccttcttctatgagatgtgctggtacgtgttggagcgctacgtcttc
agcctgaccaaaacctcctacctcacaccagagttccagaagcacacgctgggcattggt
ctgaagaagccggccagctcggatccagccatcgagcagctgaaggaggagggggagggg
gaagagagggatgagggaagcagtgatgaagagtttgatgttaaacttcatctgactccc
cttgagctggaggggatgtggaacctgctgggtaaactggaggctctgccctccaacaag
aagtgtctccccgcaggcatacacaacgccccggcactcatcacacacatcaaggctctg
ctgaaggaacacgccagtgacaaccccaaactatcgtactccgggaagcccatcgtcaag
tggccaaagagaccctcctggtaccagcctcctcctccaccacctcctcctcctcgccct
aaactggcctctacccccgtcaccccccgaccacagaagccagcctcctccatgtctgtg
ctgaggcgccgcagagtcaggtgtaagcgctgtgaggcctgtatgagacctgagtgtgga
gactgtaacttctgcagagacatgaagaagtttggaggaccagggaaactcaagcagacc
tgtgtgcttcggcagtgtctctctccgggccttcctctgtctgcagtgtgtgagatctgc
aaagagcccaatcaggaggagactggagacccctccctcactctgatggaatgttccaac
tgtgcacagatagtccaccctgcctgcctcacggttcaaggtgagggggtggtgaacaga
gacctgcccagctgctgggagtgtccaaagtgtgtccaaggcatcactgacccagagtca
tcaggcagcgatgaaccgttggctgcaggccaccagcagtacatccggccccgaggcccc
ctggtcctcagactgggccccgggccctctgctaccatagggggtcctgtgggcacccag
caggatggggaggtgattcgctgtgggttcttcactcctcctcttccttcctgctcttct
tcctcctcacttctattggtggcggcccctctgccttctcagccaatcagctcgagactg
cagtctaaaggagacgcaggggaaggccttccagcgaagcggaaatcttcctcgctgctg
gacgcccgtatggctaagatttaccgccgacagagacacagccatgatggagacgactct
gccagtgatgatgatgacgatgatgatgatgatgatgatgaagcctctcgcagaagaaag
gcactctatgcccgaggaggggggcactctgccaggaggggctttggggccagcaggaga
gggctactgagggggggctcggcccgcagggggcacctggctgctggctcctcctcagca
ctcaagctgaaacgagggatgggcgtgagggaagcagggaggagggggcgaggggtgagg
ctgaggggaggctccaggatgcagcgaagaggagaagagtccgaagagtcagatgatgac
gacgatgatgacgatgatgatgaagaggaggaagaggacagtgaagatgcagacaaagaa
caactgccccgtcgacggaggaggaggcggcagactgatgatgaagacgaggacagtgag
gggcaggactttgaccctgaagacgaggacatggacacactggaagatgaaggggaggag
gaggatgaggaagggcgctgggattccgacccagaacccccagtgcttctggtgtcagat
ctgaacgatgacctgctgagcggctcctacctgacggtcaccttgcagcggccacacagg
gccaagagacacgcaggctctatagttccaaagctagaagcagccatgggtgtgaggaca
gctgcggggggggctgcaggtcagcagggcttcatccagaggaagacggctctgtccaaa
ccctcccgactgaagagtgctgactcagcagctgacagtggcaccccgagaggaccggga
aggccacgtatgcgaggtaaccatggcgacagaggcactcgagatcactctgtgacttcc
tcagaggaagaggaagctgctgcgtcttctgtgccctcttccctgtctcccccctccctg
ctgtctctgccctcctttaaggacgtgggcaacgagagtgggggggagaaggaggtgtgg
gtgtcagtgttccagtacctggaccgagcccagctgttggcctgcatgaccgtctgcaag
gcctggtacaagtggagctgtgacaagcgtctgtggagccacgtggatgtgagccgctgc
agcccgctcagcaaccaggtgctggccggcatcatcaaacgccagcccgcctctctggat
ctgtcctggacccccctggccaagagacagctcaactgtctgctcaccaggctcccaggt
ctgagggagctgagggtgacggggctgtcctggtcttgcctgtcggcgctggtctccccc
acgctgccctgcctgcggctgctggacctgcgctggtgtgaaggcctcaaagatgcccag
attaaagagatcctcacccctccaggcttggagtcgtcccgcagcagattgaggaacatg
gtgacgctgcgtctgtcggggctggatgtcagtgagtccacgctgcggctgctgcagcgc
cacatgccccagctgcagaggctggacctggctcactgtaaggacatcacagactcctcc
atcagcctgctggcagccgccggctcacacagccgcaacaacctcactgagctcactctg
gcaggttgtagcgagctgacggatggctgtctgtcctacctgaagcgtctgtcctctctc
actctgctggacctccgaggctgtaagagcatcagccgacgggcctgtgacgccttcatc
tctgacctgtcccacgtggccctcttctgtatgatggaggagaatctcatccagcgcctg
gattaa
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integrated database retrieval system
