Gymnodraco acuticeps: 117552313
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Entry
117552313 CDS
T09661
Name
(RefSeq) sodium channel protein type 4 subunit alpha-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gacu04040
]
117552313
Ion channels [BR:
gacu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
117552313
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
IQ_SCN5A_C
Na_trans_assoc
GPHH
Motif
Other DBs
NCBI-GeneID:
117552313
NCBI-ProteinID:
XP_034081563
UniProt:
A0A6P8V1J1
LinkDB
All DBs
Position
Unknown
AA seq
1571 aa
AA seq
DB search
MPSRGQSLFKMWILKKDVVQREEKRLSPPQLKQLMEGGVRARLKGTRMASLLPPAGSETF
RRLKPASRERIQDRQTSEVVQLEAGKPLPFFFGDPPPEFLNIPLEEMDPYYQSQKTFVVL
SRGNVLHRFHGGPALSLLSASNPLRRAAIVLTLTHSLFSSFILLTILSSCVFMTLSEPPE
WSSTVECVFMAIFTFEAVVKVVARGLCAGRFTFLRDGWNWLDVLVICTGYLTQVVNVRIF
TVLGSVARVLKIIPVFPGLKKTVGDLVQSVKRLGGVIALMLFFFGLCALIGQHLFMGNLN
HKCVVWPPESSDNQSSQYNYSQSNYAKYINDHANLYYLPDQRDALLCGNTSNAGTCPPGY
SCMRTGSNPDYGYTSFDSFGWSLLSVVRLVSKDFWENLMLQVLRSSGKPYLTFFLLVVFP
AGFFVLSLIVAVVALAAGEQQGAAVSKSKQREEEFSQILEAIKRSEEEETANRAALSQEP
EEEKKDSMEGLEEVQRSCPACCSVTCKVLLKWNCCGCWRGIKQLLQALVRDPLFDLGVVL
CLVINTIFMSLEHFPMTEQLSSMLNDIQLVFTVIFIVEMLLKLVAFDPYGYFQVSWNVYD
SIIVFVSLLLLADIINLPFLLLMRFLRLARWWPMLHMLMKIIWTALSSLRNLTLLLFITL
FIFSIAGMQLFGKDYKDQVCRIAEDCKLPRFHMTDFFHSLLVVLRVLFGDWVEALWDCME
VSRKTSCLLFFMMLLVSGNLLVLNLFLVLLLSPLRGLSPAGPEEKVNNNVQMALRRIYRA
TGSLLGRKTGAKPELTESDGQEVDRKEHLALDIRTNGDHEVHEETPEQKAKTPEGHQHGD
PEDCCSQKCCPLQVVDSSRGAGQVWTNFRRFCLCIVQHKLFEIFIILFIVLSSVALAFED
VHLHQWPLLKKVLHRADQLFTLLFLSEMLLKWSAFGLSKYFRDGWCCLDFLVLHVFLVSL
GVEIFGFGSLGFFLFLRSLRALGPLRILSHFQGVRVVVLSLLGGGPALLLVLLVVLLVLQ
LFSMLGVNLFAGKFFFCINETSDEVFPAREVDNRTECMFLMYENHSVQWRNHELNYDNVL
SGHLSLLHLGAAASDLGVVFSAVDWPVYETQLLAYLYYVLFIIISSFFTCNLFIRVFINH
LQRHKSGKQLFSTEQQQRWIESLKNRVLRPARPVPRPQNCLQACLLDLVSSLWFEVLVVV
VICMNLVSLMIEEYQMSNYTEEVLHYLYLVVLVLYLLEFILKVTALRKYYFTNALNVLDF
LVLIMSIPGLFADIWTLYFFSPSIIFMLRVTRVFRVLCWDPSIRKLLLSFMMSLPALLNL
GLLFLLLIFTSSIFGMLSFPFVRKQGMMDDMFNFETFGSSLICVLMISSSASWGGMLGPL
MKTSPDCDPDTLNPGSFIRGDCGSPALAIVFFIVNIYLGYLLVVNMYIAVILEVFGPEEN
QTLSDQHLLNFCKTWRKFDPESSQFIKYSELSDLCDALQDPLRIPKPNSLRLTSMDLPLQ
AGDQMLCQDVLLALAAQVCTESKCSLRARLEEKFPSKVSCGPISSTLQRKQEEVAAAVIQ
RAFRKHAAAKP
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcagaggacagtctttatttaagatgtggatcctgaagaaggacgttgtgcag
agagaagagaagaggctgtctcctccacaactgaagcagctgatggagggcggggtccga
gcccgactgaagggaacccggatggcgtctctgctgcctcctgctggatctgagaccttc
agacgcctcaaaccggcctccagagagcggatccaggaccggcagacctcagaggtcgtt
cagctggaggctgggaagcccctccccttcttcttcggagacccgcccccagagtttctg
aacatcccattggaggagatggatccctactaccaatcgcagaagaccttcgtggtcctc
agcagaggaaatgtcctccacaggtttcatggcggtccggctctctccctgctgagtgcc
tccaaccctctgaggagagccgccatcgtcctgaccctcacccactctttattcagttcg
ttcatcctcctgacgatcctgagcagctgtgtgttcatgacgctgagcgaacctccagag
tggagcagcactgtggaatgcgtgttcatggccatcttcacgtttgaagcggtggttaaa
gtcgtggcccgaggactctgtgctggacgcttcaccttcctcagagacggctggaactgg
ctggacgtgctggtcatctgcaccggatatctgacacaggttgtaaatgtgaggatattt
actgtgctgggctcagtcgctcgtgtgctgaagatcatcccagtcttcccaggtctcaag
aagactgttggagatctcgtccaatcagtgaagagactcggtggtgtcatcgctctgatg
ctttttttctttggcctctgcgctctgattggtcagcatctcttcatgggaaacctgaat
cataagtgtgttgtgtggccgccagagtcctcagacaaccagagctcccagtacaactac
agccagtccaactacgccaagtacatcaacgaccacgcaaacttatactacctgcccgat
caaagggacgctctgctgtgtggaaacacctctaatgccgggacctgtcctccaggttac
agctgtatgaggacagggagtaaccctgactacggatacaccagcttcgactcgttcggc
tggtccctgctgtctgtggttcggctggtgagcaaggacttctgggaaaacctgatgctg
caggtgttgcgatcctctgggaaaccctacctcactttcttcctgctcgtcgttttcccc
gccgggttctttgtcctcagcctcattgtggcggtggttgccttggcagccggcgagcag
cagggcgcggcggtcagcaaatcaaaacagagagaagaagagttcagtcagatcctggag
gcgataaagaggagtgaggaagaggagacagccaacagggcggcactctcacaggaacca
gaggaggagaagaaggacagcatggaagggttggaggaggtccagcgctcgtgtcctgct
tgctgctctgtcacctgtaaagtcctcctgaagtggaactgctgtggctgctggcggggg
atcaaacaactgctccaggccctggtgagggacccgctgttcgaccttggggtcgtgctc
tgcctcgtcatcaacaccatcttcatgtctctggaacatttccccatgacggagcagtta
agctccatgctgaatgacatacaactggtcttcacggtgatctttatcgttgagatgctc
ctgaaactcgtggccttcgatccgtacggatatttccaggtatcctggaacgtctatgac
agcatcatcgtcttcgtcagtctgctgctcctcgccgacatcatcaacctgcccttcctc
ctattgatgcggttcctccggctggccaggtggtggccgatgctccacatgttgatgaag
atcatctggacggctctgagttctctgaggaacctgacgctcctcctcttcatcacgctc
ttcatcttctccattgctggcatgcagctttttggaaaggactacaaagaccaagtctgt
cgcatcgcagaggactgcaagcttcctcgtttccacatgacagacttcttccactccctc
ctggtggtcctcagggttctgttcggggactgggtcgaggcgctgtgggactgcatggag
gtctccagaaagacatcctgtctcctcttcttcatgatgctcctcgtctcaggaaacctg
ctggtcctgaacctgttcctggtcttgttgctgagtccgctccgtggtctcagtccggca
ggtccagaagagaaggtcaataacaacgtccagatggctttgaggcggatctacagagct
actgggagtctgctggggaggaagaccggcgctaaaccagaactcacagagagtgacgga
caggaagtggacaggaaggaacacctggctctagacatcaggaccaacggagatcacgag
gtgcacgaggagacgcctgaacagaaagcaaaaactcctgaaggccatcagcacggagac
cctgaggactgctgcagccagaagtgctgtcccctccaggtcgtagactcgtcccgtgga
gcagggcaggtctggactaacttcaggaggttctgcctctgcatcgtccaacacaagctc
tttgagatcttcatcatcttattcatcgtgctgagcagcgtggctctggcgttcgaggac
gtgcaccttcatcagtggcctctgttaaagaaggttcttcatcgagccgatcagctgttc
accctcctcttcctcagcgagatgctcctcaagtggagcgccttcggactgagcaagtac
ttcagagacggctggtgctgcctcgacttcctggtcctccacgtgttcctggtgtctctc
ggggttgagatctttgggttcggttctctcgggttcttcctgtttctgaggagcctccga
gctctggggcccctgaggatcctgtctcacttccagggcgtgagggtggtggttctctct
ctgctgggggggggcccggccctgctgctggttctgttggtggttctgctggttctgcag
cttttcagcatgttgggcgtgaacctatttgcggggaagttcttcttctgtattaacgag
acgtcagatgaggtgtttccagctcgcgaggtggacaaccggacggagtgcatgttcctg
atgtacgagaaccactccgtccaatggaggaaccatgagttgaactatgacaacgtgctg
agtggtcacctgtcgctgctgcacctgggcgcggcagcatccgacttgggcgtcgtattc
tcagcggtggactggccggtctatgagacccaactcctcgcctacctgtactacgtactc
ttcatcatcatcagctccttctttacctgcaacctcttcatcagagtcttcatcaaccac
ctgcagagacacaagtcagggaaacagctgttctccacagagcagcagcagagatggatc
gagtctctgaagaaccgagttctgagacctgccagacctgttccccgacctcagaactgc
ctccaggcctgcctgctggacctggtgtcctccttgtggtttgaggtcctggtcgtggtg
gtgatctgcatgaacctggtgtccctgatgattgaagagtatcagatgagtaattacact
gaggaagttcttcattatctgtacctggtggtcctggtcctctacctgctggagttcatc
ctgaaggtcactgcgctcagaaaatactatttcaccaacgccctcaacgtgctggacttc
ctggtgctgattatgtccatcccaggtctttttgcggacatttggacattgtatttcttc
tctccctcgattatcttcatgctgcgagtgactcgtgttttccgtgtcctctgctgggat
ccgagtatcaggaagctgcttttgtccttcatgatgtcacttcctgccctgttgaacctc
ggcctccttttcctcctcctcatcttcacgtcatccatcttcggcatgttgagcttcccc
ttcgtgaggaagcaggggatgatggacgacatgtttaactttgagacgtttggcagcagc
ctgatctgtgtgttgatgatctcctcttctgcttcgtgggggggtatgctgggtccctta
atgaagacttcacctgactgtgaccccgacaccctgaacccgggatccttcatccgagga
gactgcggctccccagccctcgccatcgtcttcttcatcgtaaacatctacctgggctac
ctgctggtggtcaacatgtacatcgccgtcatcctagaggtcttcggccccgaggagaac
cagacgctgagcgaccaacacctcctgaacttctgcaaaacctggaggaagttcgaccca
gagagctcgcagttcattaagtacagcgagctgtcagatctctgcgacgctctgcaggat
cctctcaggattcccaaaccaaacagcctccgactgacgagcatggaccttcctctgcag
gctggagaccagatgctctgccaggacgtcctgctggccctcgctgcacaggtgtgcact
gagtccaaatgctctctccgagcccgactggaggaaaagtttccctcgaaggtgtcctgt
ggaccaatcagcagcaccctgcagaggaaacaggaagaggtggcggcggctgtgatacag
agagcgttcaggaaacacgccgccgcaaaaccctga
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integrated database retrieval system
