Gymnodraco acuticeps: 117556048
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Entry
117556048 CDS
T09661
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04010
MAPK signaling pathway
gacu04020
Calcium signaling pathway
gacu04510
Focal adhesion
gacu04540
Gap junction
gacu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117556048 (pdgfrb)
04020 Calcium signaling pathway
117556048 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117556048 (pdgfrb)
04540 Gap junction
117556048 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117556048 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gacu01001
]
117556048 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gacu04090
]
117556048 (pdgfrb)
Enzymes [BR:
gacu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117556048 (pdgfrb)
Protein kinases [BR:
gacu01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
117556048 (pdgfrb)
CD molecules [BR:
gacu04090
]
Proteins
117556048 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
Adeno_E3_CR1
RIFIN
VEGFR-1-like_Ig-like
Ig_VEGFR-1-like_5th
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
117556048
NCBI-ProteinID:
XP_034087080
UniProt:
A0A6P8VKP9
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MRRGTASTLHLTVTVTALLYFCTELRCVEISPDDKELTLAEGSFLNLTCSGSGETTWEFK
RDDVPYCQVEQVQNGGPSYQIVQSNITSSVLSLWNMSWKHTGVYLCVDRHTGETKEVAVF
VPDPEVWFIERSHGMVTKTSEESTVPCVVSNPDINVTLYERDTDQPIRGLYVPSEGYKAP
LEERTYVCRGEMNGEVMESQAFYVYSVTIPEAIDVYINASNTVLKQGEPLTVNCTVHGVE
IADFSWDMPNSEDVEPLTDVLPNMNMRSFLIFPHATVANSGNYVCHVHEPVLDQTASASV
NITVLERGFVDVKAARKQNISARLQENVELRVEIEAYPPPQVRWSKDGATIKGHKPITTR
QEHEIRYVTILTLVRVRTEQKGLYSVLVTNGDDTKEVTFDLEVQVPSQIKDLTDHHLPGK
KHLVTCVAEGVPVPSIQWYSCDSMHKCSNQTEVWQPLIAEPEVVSIRTNVSYNDTRKTSQ
VRSQVTFHKPQQVTVRCETSNRAGLLDRRDVKLVSNTLYYQVAVLAAVLALVVIIIISII
ILVAVWRKKPRYEIRWKVIESVSQEGHEYIYVDPIHLPYDLAWEMPRDNLVLGRTLGSGA
FGRVVEATAYGLTHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGA
CTKQGPLYLVTEYCRYGDLVDYLHRNKHSLLQNYAEKNQDESCLISGGSTPLSQRKGYVS
FGSESDGGYMDMSKDEPSIYMPMQEHMDTIKYADIQPSPYESPYQHDIYQEQGGSRLDLF
ISDSSALTYDDLLGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDI
MHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFSLGGTPYPDLPMNE
LFYSALKRGYRMSKPAHASDEVYEIMKKCWDEKFESRPEFSFLVQSVGNMLTDSYKKKYS
QVNDSFLKSDHPAVTRTKPRLSSPFPIGNPAFGSPPPHYVPPDPYTQSPGPGEFREEADT
QEVVTAYNEYIIPIPDPKPDDVFTDVTSESPASSLALEEETDSMSADTLPEEDRPEDTSE
RDALLGCSGTPEVEDSFL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgaggagggggacggcatccacgcttcatctgacggtcacagtgacagctctcctgtat
ttctgcaccgagctgcgctgtgtagagatctcacccgatgacaaagagctcaccttggct
gaaggctcctttctcaacctcacctgctccggctcaggggaaaccacctgggagttcaag
agggacgatgtgccgtactgccaagtggaacaagttcaaaatggtggtcctagctaccaa
attgtgcaaagcaacatcacatccagtgttttgagcttgtggaacatgagctggaagcac
acaggggtgtatctgtgtgttgaccgacacactggagaaactaaggaggtggctgttttt
gttccagaccctgaggtgtggttcatagagcgctcccacggcatggttacaaagaccagt
gaggagagcaccgtcccctgtgtggtgagcaatcctgacatcaacgtcaccctgtatgag
agggacactgatcagcccatcagggggctgtatgtccccagcgaggggtacaaggcaccg
ctggaggaacggacctatgtgtgtcgtggagagatgaacggggaggtgatggagtctcag
gccttctacgtctacagcgttaccatcccagaggccatcgacgtctacatcaatgcgtcg
aacaccgtcctgaagcagggcgaaccgctgactgtaaactgcacagtgcacggagtggag
atagcagatttctcctgggatatgcccaatagtgaggatgtcgagccgctgacagacgtc
ctgcccaacatgaacatgcgctccttcctgatcttccctcacgccacggtggccaacagc
ggaaactacgtgtgccatgtccacgagcctgtcctagaccagactgcttctgccagcgtc
aacatcactgtgctcgagcgaggttttgtggacgtgaaggcggctcggaaacaaaacatt
tcagcccggctgcaggagaacgtggagctgagggtggagattgaagcctaccctccccct
caggtccgctggagcaaagacggggccaccatcaagggacacaaacccatcacaaccaga
caagagcatgagatcaggtatgtcactattctaaccttggtaagggtgaggacggagcag
aagggcctctacagcgtcctggtcacaaacggagatgacacaaaggaagtgacgttcgac
ctggaagtacaagttccctctcagattaaagacctgacggaccaccacctccctggaaag
aaacacttggtgacctgtgtcgctgagggggtcccagtcccgagcatccagtggtacagc
tgtgacagcatgcacaagtgtagcaaccagacggaggtgtggcagcctctgatagcagag
ccagaggtggtgagcatccggaccaacgtgagctacaacgacactcgtaaaacaagccag
gtgcggagccaggtgaccttccacaagccccagcaggtgacggtgcgctgcgagaccagc
aaccgggccggactcctcgacagaagagacgtcaaactggtgtccaacacgctgtactac
caggtggcagtgttggctgctgttctggccttagtggtcatcattatcatatccatcatc
atcctcgttgctgtatggaggaagaaacctcgctatgagatcagatggaaagtgatagag
tctgtgagccaggaagggcacgagtacatctacgtggatcccatccacctgccttatgac
ctggcctgggagatgccacgagacaacctggtgctgggtcgcactcttggatcaggagcc
tttggcagggtggttgaggcaactgcgtacggtctcactcattcccagtccagcacaaag
gttgcggtgaaaatgttgaaatctacagccaggaggagtgagactcaggctctgatgtca
gagttgaagataatgagtcacctgggcccacacctcaacatcgtgaatttgctgggagct
tgcaccaaacaaggccctctgtatctggtgacagagtactgtcgttatggcgacctggtg
gactacctgcacaggaacaagcacagcctgctgcagaactacgccgagaagaaccaggat
gaaagctgcctcatctccggaggaagcactccactcagccagaggaaaggctatgtgtcc
tttgggagtgagagtgacggaggatacatggacatgagtaaagatgagccctccatctac
atgcccatgcaggagcatatggacaccatcaagtatgcagacatccaaccctctccatac
gagtctccctaccagcatgacatctatcaggaacaaggtggcagcagattggacctgttc
atcagtgactcttctgccctcacatatgacgatctgttgggcttcagctaccaagtcgcc
aaggggatggagttcctcgcctccaagaattgcgtccatcgtgacctcgctgccaggaat
gtgttgatttgcgaggggaaactggtgaagatctgcgacttcggcctggccagagacatc
atgcatgattccaactacatctctaaaggcagcaccttcctgcccctgaagtggatggca
ccagaaagtattttccataatttgtataccaccctgagcgacgtgtggtcgtacggcatc
cttctttgggagattttctctttgggaggaaccccctaccctgatctgcccatgaatgag
ttgttctacagcgctttgaagagaggctaccgaatgtccaaacctgcacacgcctccgat
gaagtttatgaaatcatgaagaagtgctgggacgagaagtttgaaagtaggcctgagttc
tcctttctggtccaaagtgttgggaatatgctgaccgacagctacaaaaagaaatacagc
caagtcaatgacagcttcttgaagagtgaccatccagcagtcacccgcaccaaacccagg
ctctcctcaccctttccgatcggcaacccagctttcgggtccccacccccgcactacgtc
cccccggacccctacacccagagcccgggccccggagaattcagagaagaggcagacaca
caggaagtcgtaactgcatacaacgaatacatcatccccatcccagaccccaagcccgat
gacgttttcactgatgtcacatcagaaagccctgcaagctctctggctctggaggaggag
actgactccatgtcggctgacactctcccagaagaggaccggccggaggacaccagcgag
agagacgctctgctgggctgctccgggacgcccgaggtagaagacagcttcttgtag
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integrated database retrieval system
