Gymnodraco acuticeps: 117559145
Help
Entry
117559145 CDS
T09661
Symbol
apaf1
Name
(RefSeq) apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04115
p53 signaling pathway
gacu04210
Apoptosis
gacu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117559145 (apaf1)
04115 p53 signaling pathway
117559145 (apaf1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117559145 (apaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
APAF1_C
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
WHD_APAF1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
NB-ARC
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_WDR41
CARD
NBCH_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_HPS5
RMC1_N
Beta-prop_WDR19_1st
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Beta-prop_EIPR1
PEP5_VPS11_N
Beta-prop_NWD2_C
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_ACSF4
Beta-prop_NUP159_NUP214
CARD_2
Tricorn_2nd
Beta-prop_SPT8
Beta-prop_Nup120_160
WD40_like
Beta-prop_IP5PC_F
AAA_18
AAA_16
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
117559145
NCBI-ProteinID:
XP_034091710
UniProt:
A0A6P8W0R7
LinkDB
All DBs
Position
Unknown
AA seq
1258 aa
AA seq
DB search
MALEEGARSSLLRFRYKLEQDIKPSYLMDHLISDGVLTVDEEERIKTQPTRKDQAAALLE
LLLRKDNRAYISFYNALITEAYEDLANLLHGDLPQISLSALKGSSDGCTPSVQAVLSQGG
VPQRPVVFVSRLELVNRVREKLFLVEKAPGWVTVFGMAGSGKSVLAAEAVRHQGIIEECF
PGGVHWLSIGQLDKPDLLAKILSLCFRLEQSMDSQSLHRTPNSLDEAKERLRFLMLRRYP
RSLLILDDVWDTTVLKAFDIHSRVLLTTRNRALADSVSGAKYQVEVESGLDENKGMEILA
LYTKTEVCALPEDARSIVRECKGSPLVVSLIGALLKEKPNRWHYYLRQLQQKQFKRISKS
SSYDYDALDQAMSASIEVLPDEHREFYKDLTVLENDIKVPAKVLAVLWDLEPEEVEDILE
EFVNKSLLFVDNHNKPYLYYLHDLQLDFLVEQNRTQLESLHNKVVHQYQQHYRDGPPTSG
DEECLYWIRFLTHHMAKANLSQELYSLMFSLDWVSIKARIMGPAHLINDYVEYGPILDKE
NSDVRSHFQEFLSLNGHHLEQRPFPDVVQLALSQPHSSEVYRQALLQAQGGARTGRLYFD
WLNKSSVENLSRLVLHPQQGSIYSACFSHDGTRIASCGASKTLKVFRSTSGEKLTEIQAH
DDEVLCCAFSPDDRLLATCSSDRKVKVWNVERAMLLRVFEEEHSEQVNHCQFTNTTKRLL
LATCSNDKFLNVKLWNLNKPSSQNTMFGHFEPVNHCCFSPDDTYVSTSSNDGTVKLFQVS
SANEWKTIKVSDMFEESDEEVFVKCSTWTADGKRIICAARNAALVFDVETSDMLLEIKTN
RLSTVQFCHACPTSNLLAIAFSNFAVELWDLESNNKVADCSGHLSWVQRVEFSPDGSQLL
SCSDDQTVRLWETKKVHTSSAVCLKRDSDVLFNDEEIIVSAADNCNRLQVRDGRTGSVLF
QSEEMSSRIRCTCMCRQPSAVALGQQDGTVQVLEVPSGRLLATLLGHTKTVLHCRFSPDG
QTLITSSEDTTIRVWRWQSGECKVLQGHKEQVRCFSLLSTSPSDTRLLSWSYDGTVKMWD
TEGGEKLQDIEAHQGAILSCHASPDGSLFATTSADKTAKLWHCESWQCVHTLSGHQDCVR
SCRFSWDSQRLATGDDNGEIRLWSVKDGSLLRICSRDGKDAMDSLHGGWVTDLHFSPDNS
LLVSTGGYIKWWDVEKGKALQTFFPRGTALKRIHVSSDFSTFVTIDSIGILYILQRVV
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atggctctggaggaaggggctcggagctctctgctgcgcttccgctacaaactggagcag
gacatcaaaccctcctacctgatggatcacctgatcagtgacggcgtgctcactgtggac
gaggaggagaggatcaagacccagcccaccaggaaggatcaggccgcggcgctgctggag
ctgctactgaggaaggacaaccgagcctacatctccttctacaacgccctgatcactgag
gcatacgaggacctggccaatctgcttcatggggatttaccccaaatatcacttagtgca
cttaaaggctcctctgatggctgcaccccttctgtccaggccgtgctgagtcaaggcggt
gtaccacagaggcccgtggtgtttgtcagcagactggagcttgtgaaccgggtcagggag
aaactctttctagtggagaaggctcccggctgggtcaccgtgttcggcatggccggctcg
ggaaaatccgtcctggctgctgaggctgtccggcaccaaggaatcatcgaagagtgcttt
ccgggaggggtccactggctgtccatcggccagctggacaaacccgacctgctggccaag
atcctgtcgttgtgtttccgtctggagcagagcatggactcgcagtccctccacagaacc
cccaactctctggatgaggccaaagagcgcctgcgcttcctcatgctgcgcagatatcca
agatccctgctcattctagatgacgtctgggacactacagtgctgaaggcctttgatatc
cacagtcgggttcttctgaccaccagaaacagagcccttgctgactctgttagtggagcc
aagtaccaggtggaagtggagagcggtctggatgaaaacaagggaatggagatcctcgct
ctgtacactaaaactgaagtctgtgcgcttcctgaggacgcgcgcagcattgtcagagaa
tgcaaaggttcccccttggtggtctccctgatcggggctcttctcaaagagaaacccaac
cgctggcattactacctccgccagttgcagcagaagcagttcaagcgcatcagtaagtcc
tcgtcttacgactacgacgccctcgaccaagccatgtctgccagcatcgaggtcctgcct
gacgagcaccgggagttctacaaggacctcacggtgctggagaacgacatcaaggtccct
gcaaaggtgctggctgttctgtgggacctggagccggaggaggtggaggacatcctggag
gagtttgtcaacaagtctctgctctttgtggacaatcacaacaagccctacctgtactac
ctccatgacctgcagctggacttcctggtggagcagaaccgcacccagctggagagcctc
cacaataaggtggtgcatcagtaccagcagcactacagagatgggccccccacctcagga
gatgaggagtgtctgtactggatcagattcctcacccaccacatggccaaagccaacctc
tctcaggagctgtactcgctcatgttttctctggactgggtcagcatcaaggcccggatc
atgggtccagctcacctcatcaacgactatgtggagtatggacccattctggacaaagag
aacagtgacgtgcgcagtcacttccaggagttcctctctctgaacggccaccacctggag
cagcgtccgttccctgacgtggtgcagctggctctgtcgcagccccacagctccgaggtg
taccgccaggctctgctgcaggcgcaggggggggcccgcacagggaggctctactttgac
tggctgaataagagcagtgtggagaatttgtcccggctggtgctccacccccagcagggc
tccatctactccgcctgcttctcccacgatggaaccaggatcgcctcctgtggagccagc
aagacactgaaggtgtttaggagcacctcaggtgagaaactcacagagatccaggcccat
gatgacgaggtgctctgctgtgccttctcccctgatgaccgtctcctagcaacctgctcc
agcgacaggaaagtcaaggtgtggaacgtggagcgagccatgctgctgagggtctttgag
gaggagcattcagagcaggtcaaccactgtcagttcaccaacaccacaaagcgcctcctg
ctggccacctgctccaacgacaagttcctgaacgtcaagctgtggaacctcaacaagccc
tcctcccagaacaccatgtttggtcactttgagccggtcaaccactgctgtttctccccc
gatgacacctacgtgtccacttcctccaacgacggtaccgttaagctgtttcaggtctct
tctgccaacgagtggaagacgatcaaagtgagcgacatgtttgaagagagcgatgaagag
gtgttcgtcaagtgcagcacctggacggctgacggcaaacgcatcatatgtgcagccagg
aacgctgctctggtgtttgacgtggagacatcagacatgttgttggagattaaaaccaat
cgtctgagcacggtgcagttctgtcacgcctgtcctaccagcaacctgctggctatcgcc
ttctccaacttcgctgtggagctgtgggacctggagagcaataataaggtggcagactgc
agcggtcacctgagctgggtgcagcgcgtggagttttctcctgacggctcccagctgctc
tcctgctccgacgaccagactgtcaggttatgggagacgaagaaggtgcacacctcttca
gctgtctgcctgaaaagagactctgacgttctcttcaacgatgaagaaatcatcgtgtca
gctgcagacaactgcaacagactgcaggtgcgtgatggccgcacagggtcggttctgttc
cagtcggaggagatgtcgtcgaggatccgctgcacctgcatgtgcagacagccctctgct
gtggctctgggtcagcaggatggcactgtacaggtgttggaggtgccctctgggaggctc
ctggccactctgctgggacacaccaagacggtgctgcactgccgcttcagcccggacggc
cagaccctcatcacatcctccgaggacaccaccatcagggtgtggaggtggcagtctggg
gagtgcaaagtcctgcagggtcacaaggagcaggtgagatgtttctctctgctctccacc
tctccctccgacaccagactgctgtcctggtcctacgacggcactgtgaagatgtgggac
acagaggggggcgagaagctgcaggacatcgaggcccaccagggagccatcctgtcctgc
cacgcctctccagacgggagcctcttcgccaccacttcagctgacaagactgctaagttg
tggcactgtgagtcgtggcagtgcgtccacacgctgagcggccaccaggactgtgtccgg
agctgccggttctcctgggacagccagcgcctcgccacgggagacgacaacggagagatt
cggctctggagtgtcaaagacggctctctgctgaggatctgttcccgggacggtaaggac
gccatggactctctgcacggaggctgggtgaccgacctgcacttctcccctgacaactct
ctactggtctccactggcggatacatcaagtggtgggatgtggagaaaggcaaggctctg
cagaccttctttccgaggggaacagcgctgaagaggatccacgtctcctccgacttctcc
accttcgtcaccatcgacagcatcggcatcctctacatccttcaaagggtggtgtga
DBGET
integrated database retrieval system
