Gymnodraco acuticeps: 117560761
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Entry
117560761 CDS
T09661
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-15-like
KO
K16500
protocadherin-15
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
117560761
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gacu03037
]
117560761
04515 Cell adhesion molecules [BR:
gacu04515
]
117560761
Cilium and associated proteins [BR:
gacu03037
]
Primary cilia and associated proteins
USH complex and associated proteins
117560761
Cell adhesion molecules [BR:
gacu04515
]
Cadherins
Protocadherins
117560761
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
ECD
PCDH15_12th
Cadherin_FAT4_N
Ig_Cad99C_N
Cadherin_CELSR2_9th
Ig_CLSTN
Cadherin_2
Ig_BT4661_1st
CDH23_a-b
Motif
Other DBs
NCBI-GeneID:
117560761
NCBI-ProteinID:
XP_034093654
UniProt:
A0A6P8VS38
LinkDB
All DBs
Position
Unknown
AA seq
2152 aa
AA seq
DB search
MRRGWWLVRWLGTGMAILSLLTHSWGQDTEDWQYEECKLSRPGPPATIVTIDEESPNGTV
LVENMQINGRAQDPGRTISLTLLDNYDYWVILDPTRQRLYLNSTGRILDRDPPNYITTIV
VQVQCYNELVGTVIFHEVRIVVRDKNDNNPRFQQPRYYVAINELTPVGTTIFTGFSGNNG
ATDIDDGPNGHIEYSILYNPNDPGSNRTVSVANTLSGHIILAERLNYEERTRYLVLVQAN
DRAPYPPNRRTATTTLTVDVLDGDDLGPMFLPCILVNNTRDCNPLTYRVAIPEFTEPSKL
NPLNVTPAIQAVDMDRNIQPPSNRPNILYYILVGHPVAYREYFSLNRTTAELRVLQPISR
DLYQRFTLIIKAEQDNGHPLPAYADLIIEILDENNQAPYFQFATYQGYVSESSPVGTTIS
ASANLTAPLGIIALDNDIEETKDPLMRLXLDDYTTIFSLTPTGIIRYLXVDQPVDREQQM
VYTFTMVSSDGVQQSTPVTVNIPVIDANDNTPTFPEVSYSVEVFTDMQPGETVLQLTATD
TDEGLNGQVTYEILAGAQGIFIISNRTGRITVALGITLTVGKSYALTVKASDNAPEIQRR
SSITTVYIEVLPPNNQSPPRFPLLTYNLEISEAMRIGAILLNLQATDRENDPITYRIVSG
DSQKVFNLSETIGLLLLRDPLDRETTDQYRLIVTASDGNPGGTSTATVNIVVTDVNDNDP
EFDPTITTNFTFQEEEANFFVGQVRATDPDAGLNGQVRYRIVNHPDLFTISANGSIYTRV
PLDRERRSQFDLVVEASDGAVDPRRTTLTLSIQVMDIDDNSPVFSQQTYVVNVPENSPLG
TVILKLSAVDSDLFSNVTYRIKTESARQLFSLNPVTGELAVLQTLDFEDLAAMGMGASHT
FQVEAVDQEGVMPPGQATVTVRITDMNDFSPIFTQDLYTGMVAPNAEKGTVITTVFAEDR
DPAGTPASFVRYRVDLDMSPYSGSIFDVEEETGRIITKVNLNEEPSVNFKLFVIAFDDGE
PVKTNSTMVEITVLQPSRIPIFTQEEYRFPLVSELAPLGTRVGTIFAAAINQTIFYSIVA
GNELGHFQVNNRTGVISTAKPLDYENVTSYVLRVQADSMFVVMSNLRVPSKTNTAKVFIE
VQDENDHPPVFSRILYIGGVTEDTKIFSSVLKIVATDKDTGNYSQNAYRLIIPPTPEGQD
SFVIETYTGIIKSATMFRNMRRSYFTFEVIATDDYGKGLSSSADVVVSVVNALDMQVVVS
TVPPHLVEEHREELIRILERHVQDQIPGAKVIVESIGPRRHGDGFELEDYSKSDLMVYAI
DPLTNRAISPKELFKFLDGNVLEINKEFQPLLGEGGRILEIRSPDIVASVKKAAQAVGYT
EGALLALAIIIILCCIPAILIVMVTYKQFKERQAECAKTARIQMALPPGGKAAPAAAPTA
NLYEELGDSTSKRGGYGRQQQQLLRPSLLRPEELSMESGIDPGQDYYNYDQGYDIPQYGS
RRRLIPPRYDEYGEVIMEDDEYYYGPRGTEDQGRGRDRGGGPPKRVAFRDMPGDEIEQAE
PAEGGEPSKAAKRLKSVMKLSKLLAASKGGEQPSDAGPSGPSPWKKAKMFKMFGAGKKDK
DYAKLMSARRIDSQESLTGGPAVMGPIDRKSDTRSKLGKVFRKINLGNKLQIRRKSKSSV
SQGSATGSERDEEASQVASEDDKSKVSISVTESEPEAGASGSSKEKDSDGESSERSSVDR
DYLKVDLDRDDANESTVDSEEEPDEEPGDSDEESKSKSEGDETEKESISEKESGTEEESD
SEKESESEKSSATEKESETEKDSDSEKESESEKESESGTGTATEKETSTEKDSGTEKDSD
EESEEEEGSGSTRESGSSSMKSSATESRKGSSASGASGSGNGSGSGSGSGTRESGSGSTS
GSASLSGSSVKSSNRTRSSGSAVTSEKSSEELSEGESGTGTASEVESVSGSEGSLSRGSS
QRNMSESESVGGSSSVSEMTDQSSLSNKTGTAGSRSTSGSLHSQKSSQSRGSEDTITEES
EEEDEEDSETADESKESASELSDDASTGSSRKASGDPGPSAPYTGPTYSSDIRSIGNTSV
ETYGGLSPITEVDEDAISSDKSSVSGSGSGSASKDSTMSDADSESEGNSTAF
NT seq
6459 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgggggtggtggctcgtcagatggctggggacaggaatggcaatcctctctttg
ctaacccacagctggggccaggacacagaagactggcagtatgaggagtgtaagctgtcc
cggccaggcccccctgcgaccatcgtgaccattgatgaggagagccccaacggtacagtt
ttggtggaaaacatgcagataaatggccgtgcccaagacccaggccggaccatctcactg
acgttactggacaactatgactactgggtgatactcgatcccacccgacagaggctctac
ctgaacagcaccgggcgcattctggacagagatccccccaactacatcactaccatcgtg
gttcaggtccagtgctacaatgagctggttggcactgtcatctttcacgaggtacggatt
gttgtgagggacaaaaatgacaacaaccctcgctttcagcagccacgctactatgttgcg
ataaacgagctcacaccagttggaacgaccattttcactggcttctctgggaataatgga
gctacggatattgacgacggacccaatggacatatagaatacagcatactttacaacccc
aatgacccgggatctaacagaacagtgagtgttgccaacactctttcaggacacattatt
ctggctgagaggctaaactatgaggagagaactcgctaccttgttttggtccaagccaat
gaccgtgctccataccccccgaacagacggacagctacgactactctgactgtggacgtt
ctggacggagacgacctgggccccatgttcctgccttgcattttggtgaacaacactcga
gactgcaaccccctcacctaccgtgttgctatcccagaattcactgaaccgagcaaactg
aacccactgaatgtgacccctgcgatccaggccgtggacatggacaggaacatacagccc
ccgtcaaacagacccaacattctttactacatcctagttggtcatccagtagcataccga
gagtatttctccctgaacagaaccactgcagagctgcgtgttctgcagcctatcagcagg
gacttgtaccaacgtttcacactcatcatcaaggctgaacaggacaacggtcaccccctc
ccggcctatgctgacctcattatcgaaatcctggatgagaacaaccaggcaccgtatttc
cagtttgccacctatcagggctatgtgagtgagtcctccccagtgggaacgactatctcc
gccagtgccaacctcaccgcgcccctgggaatcatcgctctggataatgacattgaggag
acaaaagaccccttgatgagattanccctggatgactacaccacgatcttcagcctgacc
ccaactgggataatccgctacctgnnagttgatcaacctgtggatcgggagcagcagatg
gtctatactttcacgatggtgtcatcggatggcgtccagcagagtaccccggtcactgtg
aacatccctgtcattgatgccaatgacaacacgcccacgtttcccgaggtctcctacagc
gttgaagtcttcacagacatgcaacccggggagacggttctacagttaaccgcaacagat
actgatgagggactgaatggtcaggtgacctatgagatactggcaggtgcccagggaatt
ttcattatcagcaaccgcactggacgcatcactgtggctcttggtatcactttaactgtg
ggaaaatcttacgctctgaccgtcaaggcctctgacaacgcaccagagatccagagaagg
agctcaatcactacagtttacattgaggttctgcctcccaacaaccagagccctccacgc
ttccctctcctcacatacaacctggaaatcagcgaggctatgaggattggagccattctg
cttaatctacaggccacagacagagaaaatgacccgatcacataccgcattgtgagtggg
gattcccagaaggtcttcaacctctctgaaacgattggccttctgcttctgagagaccct
ctggacagagagaccacagatcagtaccgtctgattgtcacagcctccgacggcaaccct
ggagggacatccactgccactgtgaacattgtcgtcactgatgtcaacgataatgacccg
gagtttgacccgaccataaccactaattttacttttcaagaagaggaggccaattttttt
gtcggacaagtcagggccacagatccagatgcagggcttaatggccaggtgcgctaccgg
attgtgaatcatcctgatttgttcacaatcagcgctaatggcagcatctacacaagagtg
cctctcgaccgggagcgcaggagccaattcgacctggtggtagaagcttcagatggggcc
gtagatccacggcggaccaccttgaccctctcaatccaggtcatggatatcgatgacaac
agcccagtcttctcccaacaaacttatgtggtgaacgtacccgagaatagccctttaggg
actgtgatcctaaagctaagcgcggtggactcggacctcttctccaatgtaacgtatcgg
atcaagactgaatctgccaggcagctgttttctctaaaccctgtcacgggggagttagca
gtgctgcagacactggactttgaggacctggcagctatgggcatgggggcctcgcacacc
ttccaggtggaagctgtcgaccaagaaggggtcatgcctcctgggcaggccacagtcacg
gtccgcatcacggacatgaatgacttctcccccatctttacccaagacctgtatacaggc
atggtggcacccaatgcagagaaaggaacggtcatcacaactgtttttgctgaggaccga
gacccagcaggcactccggcaagttttgtccgctacagagtggacctggacatgtcaccg
tacagcgggagcatctttgatgtggaagaggaaactggaagaatcatcactaaggtcaac
ctcaatgaggagcccagtgtcaactttaagttgtttgtgatagcctttgatgatggagag
ccggtgaagactaacagcacaatggtggagatcactgttcttcagccttcccgcatcccg
atcttcacccaggaagagtacaggttccctttggttagtgagctggctccattaggcaca
cgggtggggactattttcgctgctgctatcaatcaaaccatcttctactccattgttgca
ggaaatgaactaggtcattttcaggttaacaacaggacaggcgtcatctcaacagctaaa
cctctggattatgaaaatgtgacgagctatgtgcttcgggtccaggctgactccatgttt
gttgtcatgtccaacctgcgtgtgccttctaaaactaacacagccaaggtgttcattgag
gtgcaggatgagaacgaccaccctcctgttttctccaggatcctctacattggcggcgtg
acggaggacaccaagatcttcagctctgtgctcaagatagtggccactgataaggacact
gggaattacagtcagaatgcgtaccgcctgattatcccgcccacaccagagggccaggac
agcttcgtcatagagacctacaccggtatcatcaaatcagccacgatgtttagaaatatg
cgcaggtcttatttcacgtttgaagttattgcaacagacgactatggaaaaggtctcagc
agcagtgccgatgtggtggtttctgtggtcaacgcgttggacatgcaggttgttgtgtcc
actgtcccaccccatttagtggaggagcatagggaagagctcattcgtattttggagcgc
cacgtccaggatcagattcccggggccaaggtgattgtggagtcaattggtccacgtcgt
catggcgatggctttgaactcgaggactacagtaaatcggacctgatggtgtacgccatt
gacccgcttaccaacagggccatttcacccaaggagctcttcaagtttcttgatgggaat
gtgctggaaatcaacaaggagtttcagccattacttggtgagggaggccgcatcctggag
atccgctccccagatatcgtggccagtgtgaagaaggcggcccaggcggtgggctacaca
gagggggctctcctggccctggccatcatcatcatcctctgctgcatccctgccatcctc
atcgtcatggtcacctacaaacagttcaaagagcgacaggcagagtgtgccaaaactgcc
aggattcagatggctttaccaccaggagggaaagcagctccagcagctgctcccactgct
aacctttacgaggagcttggcgacagcaccagcaagcgaggaggctacggcagacagcaa
cagcaactgctgaggccatctcttctgagacctgaggaactctcaatggagtcaggtatc
gacccgggccaggactactataattatgaccaagggtacgacattcctcagtatggcagt
aggaggaggctaatacctccaaggtatgatgaatatggagaggtgatcatggaggatgat
gagtattactacggtcctcgtggcactgaggaccagggcagaggcagggaccgtggtgga
ggtccacctaagagggttgcatttagggacatgccaggggatgaaatcgaacaagctgag
ccagcagaggggggcgagccttctaaggctgccaagagactgaagtctgtcatgaaactc
agcaaactcctggcagccagcaaggggggagaacagccgtctgatgccggtccttctggc
ccatctccatggaagaaagccaagatgttcaagatgtttggtgccgggaagaaggacaag
gattatgccaaactgatgtcagcccgccgcattgacagccaagagagtctgacaggcgga
ccagcagttatgggaccaatcgacagaaagtctgatacgcgtagcaagctcggtaaagtt
ttcaggaaaatcaacttaggcaacaaattgcagatacggaggaagtcgaagagtagtgtg
agccagggctcggccacaggcagtgagcgagacgaggaggcttcacaagtagccagtgag
gatgacaagtctaaagtgtcaattagtgtgacagagagtgagccagaagcaggtgcaagt
ggaagcagtaaggagaaagactctgatggggaatcctctgagagaagcagtgttgacaga
gattatctgaaagtagacttggaccgtgatgatgccaatgaaagcactgtggactcagag
gaagagcctgatgaggagccaggggattctgatgaggaaagtaagtcaaaatctgaagga
gatgaaacggagaaggaatctatcagtgagaaagaatctgggactgaagaagaatcagat
tcggaaaaagagtcagagtcagagaagtcgtcggctacagagaaagaatcagaaaccgag
aaagattcagactccgagaaagagtctgaatctgagaaagaatctgaatcaggaacaggc
acagcaacagagaaggaaacaagcacagaaaaagattcagggacagagaaagattctgat
gaagagtctgaggaggaagagggttcagggagcactagagaaagtgggtcttcttccatg
aaatcatcagctacagagtccagaaagggaagcagcgcatcaggtgcaagtggcagcggt
aatggcagtggcagtggcagcgggagtggtaccagagaaagtggcagtggtagcacaagt
ggttctgcgtctttatctggttcaagtgttaagtcatcaaatagaaccagatcatcagga
agcgcagttacctccgagaagtctagtgaagaactcagtgaaggtgagtcaggaacaggg
accgccagcgaggtagagtcagtgtcaggaagtgaaggctctttatcacgagggtccagc
cagaggaacatgtctgagtcagagtccgttggtgggtcttcatccgtcagtgagatgaca
gaccagagttccctgagcaacaagacaggtacagctggttcccgttccaccagtggcagt
ctgcattcccagaagtccagccagagccgtggttctgaggacacaattacagaggagagt
gaagaagaagacgaggaagactctgagactgctgacgagagcaaagagtcagccagcgag
ctcagtgatgatgcatcaacggggagttccaggaaggcgtctggagaccctgggccctct
gcaccctacactggtcccacttacagctctgatatcagaagcatcggtaacacctctgta
gagacatacggaggactgtcccctatcactgaggtggacgaggacgccatctcctctgac
aaatcttcagtcagtggctccggatctggcagtgcatcgaaagactcaacaatgtcagat
gctgattcagaatctgaaggaaactcaactgccttctag
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integrated database retrieval system
