KEGG   Gymnodraco acuticeps: 117561444
Entry
117561444         CDS       T09661                                 
Name
(RefSeq) TNF receptor-associated factor 2-like
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
gacu  Gymnodraco acuticeps
Pathway
gacu04010  MAPK signaling pathway
gacu04137  Mitophagy - animal
gacu04141  Protein processing in endoplasmic reticulum
gacu04210  Apoptosis
gacu04217  Necroptosis
gacu04621  NOD-like receptor signaling pathway
gacu04622  RIG-I-like receptor signaling pathway
gacu04920  Adipocytokine signaling pathway
gacu05132  Salmonella infection
gacu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gacu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117561444
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    117561444
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    117561444
  09143 Cell growth and death
   04210 Apoptosis
    117561444
   04217 Necroptosis
    117561444
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    117561444
   04622 RIG-I-like receptor signaling pathway
    117561444
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    117561444
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117561444
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117561444
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gacu03019]
    117561444
   04121 Ubiquitin system [BR:gacu04121]
    117561444
Enzymes [BR:gacu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117561444
Messenger RNA biogenesis [BR:gacu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     117561444
Ubiquitin system [BR:gacu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    117561444
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 ATG16 zf-C3HC4_2 zf-C3HC4_4
Other DBs
NCBI-GeneID: 117561444
NCBI-ProteinID: XP_034094769
EnsemblRapid: ENSGAUG00000020702
UniProt: A0A6P8VUQ7
LinkDB
Position
Unknown
AA seq 599 aa
MATQEPSPPSSMESNKPGFPKKILGNKLEDKHLCNCCHNILRRPFQAQCGHRFCSYCFNR
TVSNGPQKCSACIKEDIFEEPTSLLKQGCAFPDNAVRREVENLSAVCIHENCTWKGSIKD
YELNHEGKCEFMILPCPSCKERIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRFHVVGCDMSVEKEKIHDHERTYA
YEHLNLLLHYIMGMKVSMEGLQPQGLEVAGHKLLELQQSLRELEARVSQLSTTSSGPPVQ
GAAAATASTSSSSSGPPGPPTLAPLPPPPTLAPTLSVSTSFTPLPSSVGAALELQLHSEK
TKVVELGRRCTELEVKSGTFENVVCVLNREVERFATTMEASNRQHKLDQDKIEALSNKVR
QLERTVGLKDLTVADMEGRLREMSATTFDGVFVWRISDFAKKRQDAIAGRAPAMFSPAFY
TSKYGYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSNREH
IIDAFRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDAKNSYIRDDTIFIKAIVDLTGL
NT seq 1800 nt   +upstreamnt  +downstreamnt
atggccacacaggagccgtcccccccctcctccatggagagcaataaacccggcttcccc
aagaagatcctgggcaacaagctggaggacaagcacctgtgcaactgctgccacaacatc
ctgcgacggccctttcaagcccagtgtggacatcgcttctgttcctactgcttcaacagg
actgtcagtaatggaccccagaagtgcagtgcctgtattaaagaggatatttttgaagaa
cctacatcgcttttgaaacaaggatgtgcttttcctgacaacgcagttcggagggaggtc
gaaaacctttcagctgtttgtatccatgaaaattgcacttggaaaggcagcattaaagac
tatgagctgaaccacgagggaaagtgtgagttcatgatcctcccctgcccctcctgtaaa
gaacgaatccgcttcaatgaacaggagcgccataatgagcgagagtgcccggagagaaca
ctcaactgcaagtactgcaaggagccatttcacttcaaaaacatcaaggcacatgatgag
atctgtcccaagtacccgatgatctgtgaaggctgtgccaagaagaaaatacccagagag
aagtacgtggaccacattaagttctgcagcaaattcagaacaccgtgtcgatttcatgtt
gtgggatgtgatatgtctgtggaaaaggaaaagattcatgaccatgagcgcacctatgcc
tacgagcacctcaacctgctgctgcactacattatgggcatgaaggtgagcatggagggc
ctgcagccccagggactggaagtagctggacacaagctgctggagctccaacagtccctc
agggagctggaggccagagtctcccagctcagcaccacctcctctgggcctcccgtgcag
ggagcagccgccgccactgcctccacctcatcctccagctccggcccccctggtccaccc
actttagctcctctccctccccctcccaccttggctcccactctctccgtctctacctcc
ttcacccccctgcccagctcggtgggtgcggcgctggagctccagctccacagcgagaag
accaaagtggtggagctgggtcgcaggtgtacggagctcgaggttaaatccggcacgttt
gaaaatgtggtgtgtgtcctgaacagagaggtggagcggtttgccaccaccatggaggcc
agcaaccgtcagcacaaactggaccaggacaagatcgaggctctgagtaacaaggtgcga
cagctggagaggacggtggggctgaaggacctcacggtggctgacatggagggccggctg
agggaaatgtctgccacaacctttgatggcgtcttcgtctggaggatctctgatttcgcc
aaaaagagacaagatgccatcgctggtcgagcccctgctatgttttcaccagccttttac
accagtaagtacggatataagatgtgtctgcggatctatctgaatggagatgggacgggg
cgtggcagccacttgtccctgttctttgtggtgatgaggggactgagtgacgctctgctc
aaatggcctttcaaccagaaggtgactctgatgctgctggaccagagcaacagggagcac
atcatcgacgcctttcgccctgatgtcacttcatcttccttccagcgaccggtgagcgag
atgaacatcgccagcggctgtccgctcttctgcccgctctccaagctcgatgccaagaat
tcctacatccgcgacgacaccatcttcatcaaggccatcgtggacctcaccggcctctag

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