Gigantopelta aegis (peltospirid snail): 121375657
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Entry
121375657 CDS
T07458
Name
(RefSeq) DNA ligase 4-like
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
gae
Gigantopelta aegis (peltospirid snail)
Pathway
gae03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
121375657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gae03400
]
121375657
Enzymes [BR:
gae01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
121375657
DNA repair and recombination proteins [BR:
gae03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
121375657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_IV
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
121375657
NCBI-ProteinID:
XP_041359150
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All DBs
Position
6:56408520..56432992
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AA seq
927 aa
AA seq
DB search
MIFGFSSIFNYFAIMPNTDDENLTVTVASKVSFTELCGLLEKISKTSGNDKKKRVLKDFV
QKWRNFHDELHSKSNDTNDSFYPAMRLLLPHLDKERLAYGIKEHMLAKLMIEVLCLGKDS
PDATRLLNYKSPKNARADAGDFASVAYFVLKNRCPEKGTLTIEEVNSCLDSIATNNAAKK
KDEVRKNILHLLKNLSAMEQKWLIRMIVKELKVGLSQASILSVYHPDAEELYNVNNNIEK
VCRLMRDPSVRVHEIGISIFSPFTPMLGERASPDKVKEKLMDGYFIETKFDGCYSKNEND
FIFISSGNEYTHIFGATPFDGTFTPYIANCFKPGVKTCILDGEVLGYHAASKTYGTKAEQ
FDVKSKDLLETKGYQPCLNVFDILLFNDKVLTNLPLRERLLYIDKVFNPIEGRIMVSTHT
EAKTNQDCADALNEAIDNQEEGILVKNPESVYRPNTRKGGWFKIKPEYIGGLMDELDVLI
VGGYFGVGHRGGMMSHFLCAVAVPPEDGEKPSVFHSFCKVGSGYTKKQLSEFNLKLAEHW
KVFDKKNPPSCVVLASGFKEKPDAWIEPSNSCIVQIKAAEIIESDRFKTGFTLRFPRVEH
IRHDKPWFECMTAADVEDLKQKSGGKLTGGKFELGDSGGEPVKKKRKIVSRFERPTLMNQ
FKAADVSKVQQVSKMFENKEFCVINGPLDHPKHELEKKVVEFGGTIVQNPGSNTFCVLVE
KVAVRVNNLKKRDIYDIVKVSWFLKCVDAQRWMDWTPDDMIHTSPKTHKLFQQDYDEYGD
SFTSDTTEEQLLKVFEKMENAVQDVSTWDIAELEDKYFPDESPYGLFRTCRIYLDNNLVV
SDATTRIPNCSLDLLGLELRFFGATITDKLDADVSHAIVEVKDVSRLQQLRDVRRRRTKK
FHIVTEAWVRACLEDGELCTERIYEPK
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgatttttggtttctcatctatatttaattattttgcaataatgcccaacacagatgac
gaaaacctgacagtaactgttgcgtccaaggtttctttcacagaactttgtggtttgctg
gaaaagatttctaaaacttcaggaaatgataaaaagaaacgagttttaaaagattttgtg
cagaaatggagaaattttcacgatgaactgcactcaaaatcaaatgacacgaatgattct
ttttatcctgcaatgaggttgctattgccacatttagataaagagagattggcttatgga
atcaaagagcatatgcttgccaagttgatgattgaggtactctgtttgggaaaagatagt
cctgatgcaactcgactcctcaactataagtcacctaaaaatgcaagagctgatgctggg
gactttgccagtgtggcttactttgtgttgaagaaccgatgtccggagaaaggaacactg
accatagaggaggtgaactcttgtctggacagcatcgctacaaacaacgcggccaagaag
aaggacgaggttcggaagaatattctccacctgctgaagaacctgtcggccatggaacag
aaatggctgattcgcatgattgtcaaggagctaaaggtcggtctcagccaggcgtccatt
ctctctgtgtaccaccctgatgcagaggagctctacaacgtcaataacaacatagagaag
gtctgccgactgatgcgtgacccatctgttcgtgttcatgagattgggatcagcatattc
tctccattcactcccatgcttggtgagagagcatctcctgacaaggtaaaagagaaacta
atggatggatacttcattgaaaccaaatttgatggatgttattcaaaaaatgaaaatgat
tttatttttatttccagtggaaatgaatacactcatatatttggtgctacaccatttgat
ggtactttcactccatacattgcaaactgcttcaaaccaggagttaaaacctgtatattg
gatggagaggttttgggataccatgctgcaagcaaaacctatggaacaaaggcagaacag
tttgatgtaaagtcaaaggatctgttggaaactaagggataccagccctgtttgaacgtg
tttgacattcttctctttaatgacaaagtgctaacaaatctgccactgagagagagactg
ttgtacattgataaagtcttcaatcccatagagggacgtataatggtcagcacacacaca
gaagcaaaaaccaatcaagactgtgctgatgctctgaatgaagccattgataaccaagaa
gaaggtatcttagtaaagaatcccgagtcggtgtatcgtcctaacacgcggaaagggggc
tggttcaagatcaagcccgagtacattggtgggctgatggatgagctggatgtcttgata
gttggaggctattttggtgttggtcatcgaggtggaatgatgtctcatttcttgtgtgca
gtcgctgtgccgccagaagatggtgaaaaacctagcgtgttccactcgttttgcaaggtt
ggttcaggttacaccaagaagcagttgagtgaatttaacctaaagctggctgaacactgg
aaagtgtttgacaagaaaaacccaccatcttgtgtagtcctagcttcaggcttcaaagaa
aaaccagatgcctggatagaaccatcaaattcctgcattgtccagataaaggcagcagaa
attattgagagtgacaggtttaagacaggttttactttacgtttccctcgagttgaacac
atccgacatgacaagccttggtttgagtgcatgaccgcagcagatgtggaagatttgaaa
cagaagtctggaggcaaactaacaggtgggaagtttgagcttggtgatagtggtggtgaa
cctgtaaagaaaaaacgtaaaattgtgtctcggtttgaacgaccaaccttgatgaaccag
tttaaagcagctgatgtctccaaagtgcaacaggtttcaaaaatgtttgaaaacaaggaa
ttctgtgtgatcaatggacccttggatcatccaaaacatgaactggagaagaaggtggtg
gagtttggtggaactattgttcaaaatccaggttcaaacaccttctgtgtgctagtggag
aaggttgcggtccgtgtaaacaatctaaagaagagggatatttatgacattgttaaggtt
tcttggttcctcaaatgtgtggatgctcagaggtggatggactggacaccagatgatatg
attcacacgtcgcctaagacacacaaactgtttcaacaggactacgacgaatatggtgac
agttttacttcagacaccacagaagagcagctgctaaaggtgtttgagaaaatggaaaat
gcagtacaagatgtcagtacctgggatattgctgagttagaggacaagtatttcccagac
gaatcaccttatggccttttcagaacatgcaggatatatcttgacaacaacctggtggta
agtgatgccacgactcggattcccaactgcagtttggatcttctcggtcttgagctgcgg
ttttttggtgcaaccatcacggacaaactggatgcggacgtctctcatgccattgttgaa
gtcaaagatgtgagtcgtcttcaacaactacgagacgtgaggaggagaagaacgaaaaag
ttccacatcgttacggaggcttgggtccgagcttgtctggaggatggagaattatgtact
gaaagaatttatgaaccaaaataa
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