Gigantopelta aegis (peltospirid snail): 121390194
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Entry
121390194 CDS
T07458
Name
(RefSeq) TAR DNA-binding protein 43-like isoform X1
KO
K23600
TAR DNA-binding protein 43
Organism
gae
Gigantopelta aegis (peltospirid snail)
Pathway
gae03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gae00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121390194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gae03019
]
121390194
Messenger RNA biogenesis [BR:
gae03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
121390194
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TDP-43_N
RRM_1
RRM_7
RRM_PARP14_3
TDP-43_C
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
121390194
NCBI-ProteinID:
XP_041377887
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Position
15:29729130..29747648
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AA seq
431 aa
AA seq
DB search
MSPYIQVAEEEGDEPMEVPVEDDGTLLLTTLAAQFPGSCGLKYRNPDSGSMRGIRLSDGR
LYPPDCDWGGYVFIAVFPKVENKRKVDEASENLAMKPKRLNEKQRCSDLIVLGLPWKSNE
EDLKKYFLQFGELLMVQVKKDPKTGQSKGFGFVRFADYEAQFKCISQRHMIDGRWCDVRI
PNSKNCILQEGAQQMMNRKVFVGRCTEDMTSDDLRHHFTKYGEVVDVFIPKPFRAFAFVT
FADPDIAQSLCGEDHIIKGASVHISGAAPKNNEKDRRLGLNHTPFGGFNQGYGHTSWAPG
TRGSNQTVTNHGTALQGSLNNNLGLGNLGLGALQLNHAMLAAAQAVLSGQGGWGPLGLTN
QGGSASSVDNPTNTANNNSGFSTVSNGTSCAGNGGSFLGWGSSQTNDAPSHSPGHVGGWG
GSQSKTGTGWN
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagtccatatattcaggttgccgaggaagaaggggacgaaccgatggaagtgccagtg
gaggatgacggaacgctgttgctgaccactcttgccgcgcagtttcccgggtcttgtgga
ttgaaataccgaaaccccgacagtggctctatgagaggaattcgtctttcggacggccga
ctctacccaccagattgtgactggggtggatacgttttcattgctgtttttcccaaggtt
gaaaacaagcgcaaagtggatgaagcgtctgagaatttagcaatgaaacccaaacgactc
aacgaaaagcagcgttgtagtgatctgatagtgctaggattgccttggaaaagtaacgaa
gaggacctcaagaaatattttctgcagtttggggaactacttatggtgcaggtgaagaaa
gatccgaagaccgggcagtccaaaggctttggctttgttaggtttgccgactacgaagct
cagttcaagtgcatttctcaacggcatatgatcgatggtcgatggtgtgatgtccgaata
cctaattcaaagaattgtattctgcaggaaggagcccagcagatgatgaaccgcaaggtc
ttcgtcggccgctgcaccgaagacatgacctcggatgacctccgacatcacttcaccaaa
tacggtgaagtcgtcgacgtttttattccaaaaccatttcgagcgtttgccttcgtgacc
tttgctgacccagatatcgcccagtcgctgtgtggggaggaccacatcatcaagggggcg
agcgtgcacatcagcggggcggctccgaagaacaacgagaaggatcggcggctcggcttg
aaccacaccccttttggcggcttcaatcagggatacggccacacctcctgggctccaggg
acgcggggatcgaaccagaccgtcaccaaccatggaacggcactgcagggaagtctcaac
aacaacctcggtttgggcaatttaggtcttggggcgttgcagctgaaccatgcgatgcta
gccgcagctcaggccgttctcagtggccagggggggtggggccctcttggattgaccaac
cagggtggtagtgctagtagcgtggacaacccgaccaatacagcaaataacaattcggga
ttcagcactgtcagtaatggaacgagttgtgctggcaacgggggtagttttctagggtgg
ggcagttctcagacgaacgacgccccctcccacagtcccggtcatgttggtgggtggggt
ggttcgcagtcgaagacaggaacagggtggaattga
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