Gambusia affinis (western mosquitofish): 122820703
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Entry
122820703 CDS
T07758
Symbol
trpc5a
Name
(RefSeq) short transient receptor potential channel 5a
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gaf01009
]
122820703 (trpc5a)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122820703 (trpc5a)
Protein phosphatases and associated proteins [BR:
gaf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122820703 (trpc5a)
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122820703 (trpc5a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
Motif
Other DBs
NCBI-GeneID:
122820703
NCBI-ProteinID:
XP_043954207
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All DBs
Position
LG18:complement(21631338..21745115)
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AA seq
1094 aa
AA seq
DB search
MNPMTQLYYKKATYSPYRDRIPLQIVRAEVELSAEERAYLTAVEKGDYAGVKHALREAEV
YYNMDVNCLDPLGRSALLIAIENENLEIMELLLDHGIHTGDALLYAIRKEVVGAVELLLS
HRRPSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKRFAKDLLDQARSSRELETILNHRDNDQSEELDPRQCHDLAKLKLAIKY
HQKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFIIGLLFPVFSLIYLLAPKSAL
GRFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTIVEWMILPWVLGFIW
AEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASEEPNNCKGIRCERQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIIPSPKSFWYLLMWLHNKLCRRGQPPGEASHKCENLREFTERHADSLIQNQHYQ
EVIRNLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRRPPRRHYSSS
SETTKDDGAMASEDDSESGDGGGGGGEGGGDVGVQKSKSVTFSNPVEDDRRSAPTLGVSA
LVRSISGMTQMDKAEEGRLEDRVGWGEEEEEEGKPKSNGLKTAVMPPSSTNVLPSPSSSF
SSSLSSSLSRTRSRLHRLSSPSAKTDSFKRLSYLFSRSKRKAPPTPLPLQSPPSYTISDG
LLRPLGSHSHSDFGLSDVTRSDTHLNEVGRSVDMPSFSPLRTNGRDSLLTLPLPPPCPCQ
SLHCASNMSESSSRLLDSSEDVFQGEGIEGAGEEDMDGGGGGGMTMMMGGWVGPCDDVLE
DSCDVIEDSVTTQL
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaatgacacagctctactacaaaaaggcgacctattcgccgtaccgcgaccgc
atcccgcttcagatcgtccgagctgaagtggagctgtcagctgaggagcgggcctacctc
accgctgtggagaaaggtgactatgccggggtcaaacacgccctccgcgaggccgaggtt
tactacaacatggacgtgaactgtctggacccgctgggccgcagcgcgctgctcatcgcc
atcgagaacgagaacctagagatcatggagctcctgctggaccacggcatccacacgggc
gacgccctgctgtacgccatcaggaaggaggtggtgggcgccgtggagctgctgctgtcg
caccggaggccgagcggcgagaagcaggttccctccctgatgatggacagccagttctca
gagttcacccccgacataactcccatcatgctcgctgctcacaccaacaactacgagatc
atcaagctgcttgtccagcgcaaggtcaccatcccaaggccgcaccagatacgatgcgac
tgcgttgagtgtgtttccagttcagaggtcgacagccttcgacattcccggtctcgactc
aacatctacaaggcgctggcgtcaccgtctctcatcgcgctgtccagtgaggatcccatc
ctcactgccttcagactgggctgggaactcaaagagctgagcaaggtggagaacgagttt
cggcaggagtacgaggagctttcccagcagtgcaaacgattcgccaaggacctcctggat
caggccagaagttcccgcgagctggagaccatcctgaaccacagagacaacgaccagagc
gaggagctggaccccaggcagtgccacgacctggccaagctcaagctcgccatcaagtac
caccagaaggagtttgtagcgcagccaaactgccagcagctgctggccactctgtggtac
gacggtttcccaggctggaggagacgacactgggccgtcaaactggtgacctgcttcatc
atcggactgctgttcccagtcttctcactgatctacctgttggccccaaagagcgctctg
gggcgcttcatcaagaaacccttcatcaagttcatctgccacaccgcgtcctacctgacc
ttcctcttcctcctgctgctggcgtcgcagcacatcgcccgcaccaacctgcacatgcag
ggacccccacccaccatcgtggagtggatgatccttccctgggtgctgggttttatctgg
gcagagatcaaggagatgtgggatgggggattcacagagtacatccatgactggtggaac
ctaatggactttgccatgaactccctctacctggccaccatttctctgaagatagtggct
tacgtcaagtacaactcctctcgtccaagggaggagtgggagatgtggcacccgacgctg
atcgccgaggctctgttcgccatcgccaacatcttcagctcgctcagactcatctccctc
ttcacagccaactcccacctcggccctctgcagatctctctggggagaatgctgctggac
atcctcaagtttctcttcatttactgtctggttctgttagcgtttgctaatggactcaac
cagctgtacttctactacgagaccaaggcttcagaagaaccgaacaactgcaaggggatc
cgctgtgaaaggcagaataacgccttctccacgttatttgagactctccagtcgctcttc
tggtccatatttgggctgctcaacctttacgtcaccaacgtgaaagctcggcacgagttc
accgagttcgtcggggcgacgatgtttgggacgtacaacgtcatctctctggtggttctg
ctgaacatgcttatcgccatgatgaacaactcctaccaactcatcgctgaccacgccgac
attgagtggaagtttgcccgcaccaagctgtggatgagctactttgatgagggcggcacg
ctgccccctcccttcaacatcattcccagcccaaagtccttctggtacctcctgatgtgg
ctccacaacaagctgtgcaggagaggccagccgcccggagaggcctcgcacaaatgcgaa
aaccttcgagagttcactgagcgccatgctgacagcctgatacagaaccagcattaccag
gaagtgattcgaaatctggtgaagagatacgtggccgccatgatacgaagcgccaaaacg
gatgaagggctgacggaggaaaacttcaaggagttgaagcaggatatctccagtttccgc
tatgaagtcttggatctcctcggcaaccggcgtcctccccggcgacactattcttcatcc
agcgagacgacaaaagacgatggtgccatggcgtcagaggatgatagcgaatcaggtgat
ggaggaggaggaggaggagaaggaggaggagacgttggagtccagaagtcgaagagcgtc
accttctccaacccggtggaggacgatagaagatcagcgccgacgcttggcgtgtctgcg
ctggtgcgctccatttcaggaatgacgcagatggacaaagcagaggaggggagactggag
gacagagtggggtggggagaagaggaggaagaggaggggaaaccaaaaagcaacgggcta
aagacggccgtcatgcctccgtcctccaccaatgtcctcccctcgccatcgtcgtcattt
tcctcttcgttatcatcatcgctttctcgcacaaggagccgcctgcatcgtctctcgtcc
ccaagcgcaaagacagactctttcaaacgcctctcctacctgttctcccgctccaaacgc
aaagccccacccacgccgctgcctctccagtccccgccctcgtacaccatctccgacggg
ctgctccgccccctcgggagccacagtcactccgacttcggactcagcgacgtcaccaga
agtgacactcacctgaacgaggtgggtcgctcggtggacatgccgtcattctcgccgctg
agaacgaacgggcgggactcgctcctgacgcttcctctcccgccgccgtgcccctgccaa
tccctgcactgtgcttccaacatgtctgagtccagctcgcgactgctggactccagcgag
gacgttttccagggagagggcatagaaggggcaggcgaagaagacatggatggaggaggc
ggagggggaatgacgatgatgatgggcgggtgggtgggaccatgtgacgatgtcttagag
gacagctgcgatgtcatagaggactctgttaccacgcagctatag
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