KEGG   Gambusia affinis (western mosquitofish): 122822198
Entry
122822198         CDS       T07758                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf03420  Nucleotide excision repair
gaf04110  Cell cycle
gaf04114  Oocyte meiosis
gaf04120  Ubiquitin mediated proteolysis
gaf04141  Protein processing in endoplasmic reticulum
gaf04310  Wnt signaling pathway
gaf04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122822198 (rbx1)
   04120 Ubiquitin mediated proteolysis
    122822198 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    122822198 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    122822198 (rbx1)
   04350 TGF-beta signaling pathway
    122822198 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    122822198 (rbx1)
   04114 Oocyte meiosis
    122822198 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gaf04121]
    122822198 (rbx1)
   03400 DNA repair and recombination proteins [BR:gaf03400]
    122822198 (rbx1)
Enzymes [BR:gaf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     122822198 (rbx1)
Ubiquitin system [BR:gaf04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   122822198 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     122822198 (rbx1)
   Cul2 complex
     122822198 (rbx1)
   Cul3 complex
     122822198 (rbx1)
   Cul4 complex
     122822198 (rbx1)
   Cul7 complex
     122822198 (rbx1)
   Cul8 complex
     122822198 (rbx1)
   Cul9 complex
     122822198 (rbx1)
DNA repair and recombination proteins [BR:gaf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      122822198 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      122822198 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 122822198
NCBI-ProteinID: XP_043956607
LinkDB
Position
LG19:6566557..6568358
AA seq 108 aa
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcagcgatggatgttgacacaccaagcggtactaacagtggagctagcaagaag
cgcttcgaagtcaaaaagtggaatgctgttgcgctgtgggcctgggacatagtggtggat
aattgtgccatctgtaggaaccacatcatggatctctgtatagagtgtcaggccaaccag
gcgtctgcgacgtcggaagagtgtaccgtagcctggggtgtctgcaatcatgcctttcat
tttcactgtatttcacgctggctgaaaaccagacaggtgtgtcctctggacaacagagag
tgggagttccagaaatatggacactag

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