Gambusia affinis (western mosquitofish): 122822198
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Entry
122822198 CDS
T07758
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03420
Nucleotide excision repair
gaf04110
Cell cycle
gaf04114
Oocyte meiosis
gaf04120
Ubiquitin mediated proteolysis
gaf04141
Protein processing in endoplasmic reticulum
gaf04310
Wnt signaling pathway
gaf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122822198 (rbx1)
04120 Ubiquitin mediated proteolysis
122822198 (rbx1)
09124 Replication and repair
03420 Nucleotide excision repair
122822198 (rbx1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122822198 (rbx1)
04350 TGF-beta signaling pathway
122822198 (rbx1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122822198 (rbx1)
04114 Oocyte meiosis
122822198 (rbx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122822198 (rbx1)
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122822198 (rbx1)
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
122822198 (rbx1)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
122822198 (rbx1)
Multi subunit type E3
SCF complex
Ring finger protein
122822198 (rbx1)
Cul2 complex
122822198 (rbx1)
Cul3 complex
122822198 (rbx1)
Cul4 complex
122822198 (rbx1)
Cul7 complex
122822198 (rbx1)
Cul8 complex
122822198 (rbx1)
Cul9 complex
122822198 (rbx1)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
122822198 (rbx1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
122822198 (rbx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
122822198
NCBI-ProteinID:
XP_043956607
LinkDB
All DBs
Position
LG19:6566557..6568358
Genome browser
AA seq
108 aa
AA seq
DB search
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcgatggatgttgacacaccaagcggtactaacagtggagctagcaagaag
cgcttcgaagtcaaaaagtggaatgctgttgcgctgtgggcctgggacatagtggtggat
aattgtgccatctgtaggaaccacatcatggatctctgtatagagtgtcaggccaaccag
gcgtctgcgacgtcggaagagtgtaccgtagcctggggtgtctgcaatcatgcctttcat
tttcactgtatttcacgctggctgaaaaccagacaggtgtgtcctctggacaacagagag
tgggagttccagaaatatggacactag
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