Gambusia affinis (western mosquitofish): 122822550
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Entry
122822550 CDS
T07758
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04010
MAPK signaling pathway
gaf04020
Calcium signaling pathway
gaf04510
Focal adhesion
gaf04540
Gap junction
gaf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122822550 (pdgfab)
04020 Calcium signaling pathway
122822550 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122822550 (pdgfab)
04540 Gap junction
122822550 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
122822550 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
gaf04052
]
122822550 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
gaf00536
]
122822550 (pdgfab)
Cytokines and neuropeptides [BR:
gaf04052
]
Cytokines
Growth factors (RTK binding)
122822550 (pdgfab)
Glycosaminoglycan binding proteins [BR:
gaf00536
]
Heparan sulfate / Heparin
Growth factors/receptors
122822550 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
EF-hand_Zip
Motif
Other DBs
NCBI-GeneID:
122822550
NCBI-ProteinID:
XP_043957263
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Position
LG19:complement(12767284..12788896)
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AA seq
208 aa
AA seq
DB search
MRATICCFLLWTTYLLATAEKEVEFPQELIDRLSNSEIHSISDLQRLLEIDSVGTGNDVV
EEHKHHKHHNHHKNSSHHHGYYNELKSSQLHSRRKRSIVEEAVPAACKTRTVIYEIPRSH
VDPTSANFLIWPPCVEVKRCTGCCNTSNMRCHPSRKHHRTVKVAKVEYVRRRPKLKEVFV
RLEDHLECVCTSQHHVVEHLDAETADVR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgagagccacaatttgctgcttcctgctgtggacgacgtacctgctggccactgctgag
aaggaagtggagtttccacaggagctgatcgatcgactctccaacagtgaaatccacagc
atcagcgacctccagcggttactggagattgactccgtaggtacgggaaacgatgttgtt
gaggagcacaagcaccacaagcaccacaaccaccataaaaactcgtcccatcatcatggt
tactacaatgagctgaaaagctcccagctgcacagccgacgcaagaggagcattgtcgaa
gaggccgtcccggcagcatgcaagacgcggacggtgatctatgagatcccccggagccat
gtggatcccacatctgccaacttcctgatatggccaccctgtgtggaggtgaagcgctgc
acaggatgctgcaacaccagcaacatgcgctgtcacccttcccgcaagcaccaccgcacc
gttaaggtagccaaggtggagtacgtgaggaggagacccaagctgaaggaggtctttgtg
aggttagaggaccacctggagtgtgtgtgcacgtcacaacatcatgtggtagaacactta
gatgcagaaacagcagatgtgaggtga
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