KEGG   Gambusia affinis (western mosquitofish): 122822877
Entry
122822877         CDS       T07758                                 
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf03440  Homologous recombination
gaf03460  Fanconi anemia pathway
gaf04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122822877
  09124 Replication and repair
   03440 Homologous recombination
    122822877
   03460 Fanconi anemia pathway
    122822877
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gaf01009]
    122822877
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gaf04121]
    122822877
   03036 Chromosome and associated proteins [BR:gaf03036]
    122822877
   03400 DNA repair and recombination proteins [BR:gaf03400]
    122822877
Enzymes [BR:gaf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122822877
Protein phosphatases and associated proteins [BR:gaf01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     122822877
Ubiquitin system [BR:gaf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122822877
  Multi subunit type E3
   BRCC complex
    122822877
Chromosome and associated proteins [BR:gaf03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     122822877
DNA repair and recombination proteins [BR:gaf03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     122822877
    BRCA1-A complex
     122822877
    BRCA1-B complex
     122822877
    BRCA1-C complex
     122822877
    BRCA complex
     122822877
   FA (Fanconi anemia) pathway
    Downstream FA components
     122822877
SSDB
Motif
Pfam: BRCT BRCT_2 zf-C3HC4 zf-C3HC4_4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-Nse RTT107_BRCT_5 RING_XB3-XBAT31 zf-RING_5 zf-MIZ zf-ANAPC11 zf-rbx1 zf-RING_6 zf-RING_10 zf-RING_4 PTCB-BRCT zf-PARP TRAF3_RING DUF4259 RING_ZNF598
Other DBs
NCBI-GeneID: 122822877
NCBI-ProteinID: XP_043957852
LinkDB
Position
LG20:complement(18436420..18470890)
AA seq 1318 aa
MTTPKATDVKKGISVLWETLQCPICLDLMSAPVSTKCDHQFCKFCITKLLDNSKQNRANC
PVCKFKITKRSLQESPGFQRLVAGLQEMIQAYEHDTCTNYFTGLPQQRKNTKNTETSKGA
CDLSFGDPSGIEQNNKGTEHRNDSPQSCSSTVAAQNGFAQLMGLEDSASITAENEGLDSG
LGDVPPTSDKKTSENLEPETANVGKNATNASKNKRLKRKPEKASNCLDSTQEEPGQQDVR
KSSRKTQKKDLEHDKIIEQKKKKSLEKVAEWLLKVPAEDELELEKSLHSEDDSDSSSSTS
ILDDEPQNVKLNPKREHRGKAIEEQVFGVIYKRRGSKVTEPLTAEEIETCNKFSKLKKKN
NVRLCEERQIVENNTGSDFFEELEQMAVKEKLEETVEELSQKESDKYEGEHVVPVADIIQ
PETTTPRRRTRKSLQQPEGDLQEQTQLKSKDTDKKSDCRREKNSKLSRKKPTKVAKPLVL
VEVQDRETSPKPSERVKEVEVQIESYPSSEEQTTPVMKNARRSRRLQLFVDEVHGSRKKT
TSKVTATKTDEVAKKQSDETMDATPSKSGNLMKETKRNRYVSEENIGVIESLEKRGRMSL
TQAEAEVPEAQTLAKPDCTVSVVPNSTSPTDPSIVGPTLESEKQENNHPPGSQQEAFANV
EEYEDGKNDSELDTEQLLQSFKASKRKSFLLGDPNAKRCRSLDVENAEGSQRNCSSSEPS
ENINQVSKSTCSDVISPSNSPSKIRKPDQALLDASNPDGNCPSRSSVSSGLSPNKVAKHD
RDSPLSVVPQVVDSGLRFTDVEQEAARASQSDYNLTEIPDGISKCPSDNKTETIFVGESS
LTPDQEVKEANGSGEVSTQSSIQTNQKKKRKTRRLESSSESSSSSKEELPTLAQIFGTSD
RPQAEIKHQGEICEANRLKAVGEEPLGRPAGSPTPDQLDSSQASVDLFGTPEECDAPESC
VGVCFDSSQFSSEVLVTQQKIEMQKELVRLEKLMALVSEVLQEKEGSPAADTNQGCENRG
PELEDQDQVQSSDRKDILDAETKAPDDKVAECGGFSANAVQDLTHAESTVKDTKTPNSIS
ATKKAKTCDSPPDCQEDKENNSPPKEKSKAKLVLVSSGLGPNEQIMVKKFAKRVGGRVVS
RVTPEVTHIIMRTDDQLVCERTLKYFLGIAGRKWVVSFQWISECFKEKKLLEESSFEVRG
DVVNGPNHQGPLRARTAGGSNLLMRGYKICFKGPFTDMSTDEMEWMVELCGATVVKDPLI
LDGEQKSHHIVIVQPRSDSPSSSSCCGGLSRNATVVTRGWLLDSVATYTLQNFSSYTV
NT seq 3957 nt   +upstreamnt  +downstreamnt
atgacgaccccaaaagccaccgatgtcaaaaagggaatctcagtcctatgggaaactctt
caatgtcccatttgcctggatttaatgtctgcaccggtttctactaaatgtgatcaccag
ttttgcaaattttgtattacgaagcttttggacaactccaaacagaacagagccaactgc
ccagtgtgtaaattcaagataacaaaaaggagcctgcaggagagccctgggtttcagaga
cttgttgcaggacttcaggagatgatacaagcatatgaacatgacacctgcacaaactac
tttactggactgccacagcaaagaaagaacactaaaaatacagaaacaagtaaaggtgca
tgtgatttatcatttggagacccatctggaattgaacagaacaataagggaactgaacac
cgaaatgattctccacagtcctgctcctcaactgtagcagctcagaatgggtttgctcag
cttatgggacttgaagactctgcatctataacagcagaaaacgaaggcctggatagcggc
ctgggtgacgtcccaccaacgtctgacaagaaaacgtcagagaacttggagccagaaact
gcaaatgttggaaaaaatgcaacgaatgcgtctaaaaacaaaaggctgaagcgcaaaccg
gagaaggcctccaactgtttagattcaactcaagaggaacctggtcaacaggatgtccga
aagtcctctagaaagacacagaaaaaggatttggagcatgacaagattattgagcagaaa
aagaagaaaagtttggagaaagtcgccgagtggctcctcaaggttccagccgaagacgag
ctagaactagagaaatctctccacagcgaagacgattcggatagcagttcgtctacgtcg
atcttggacgatgagccgcaaaacgtcaaattgaatcctaaaagagaacatcgcggcaaa
gccatagaagagcaagtttttggcgtcatctacaagcgaagaggaagcaaagttaccgag
ccgctaacagctgaagaaatagaaacttgtaataaattttcaaagctgaagaagaaaaac
aatgtccggctttgtgaagagcgacaaatagtagaaaataacactggcagtgactttttt
gaggaattggaacagatggcggtcaaggaaaagcttgaggaaactgtggaggagttgagc
cagaaagaaagcgataaatatgagggggaacacgtggttcctgttgctgatatcatacaa
ccggagactacaacaccaaggagaaggactcggaaaagtctgcaacaacctgagggcgat
ttacaagagcagactcagttgaaatcaaaagataccgacaagaaaagtgattgtcggaga
gaaaaaaattcaaagttaagcagaaagaaaccaactaaggtggcaaaacctcttgtgtta
gtcgaagttcaggacagggaaacgagtcctaaacccagtgaaagagttaaagaagtcgaa
gttcaaatagagtcttatcccagcagcgaggaacagacaactccagtcatgaagaacgcc
agaagaagcagaaggcttcagctttttgttgacgaggttcacggaagtcgcaagaaaaca
acctctaaagttactgcaactaaaacagacgaagtggctaaaaagcaatctgatgaaaca
atggatgcaactccatctaaaagtggaaaccttatgaaggaaactaaaagaaacagatat
gtttctgaggagaatattggagtgatagaaagtttagaaaagagaggaagaatgtctttg
acacaagctgaagcagaggtacccgaagcgcaaacgctagctaaacctgactgtaccgtc
tctgtggtcccgaactccacaagtccaaccgatccatcaatcgtaggtccaacgcttgaa
agtgagaagcaggagaataatcacccacctggctctcagcaggaagcatttgctaatgtt
gaagagtacgaggatggcaagaacgacagtgaactggacacagagcaacttctccaaagc
ttcaaagcttccaaacggaaatctttccttcttggggaccccaacgcgaagagatgtcgc
agtttggatgtagaaaacgcagaagggagccaacgcaactgttcaagctctgaaccatca
gaaaatataaaccaggtttcaaaatcgacttgtagtgacgtgatttccccttccaactca
cccagtaagattagaaaaccagatcaagctctactggatgcctccaatcctgatgggaac
tgtccatccaggagcagcgttagcagcggtcttagtccaaacaaagtggcaaagcatgac
agagacagtcctctgtctgtcgtccctcaagtcgtggactctggcctccgcttcacagat
gttgaacaggaagcagcaagggcttcccagagcgactacaacctgacggagatcccagac
ggcatttcaaaatgtccttcggataacaaaaccgagacaatttttgttggagagtcttct
ttaaccccggaccaagaggtcaaggaagccaacggcagcggagaagtcagcactcaatcc
tccatccagacaaaccagaagaagaagaggaagactcggaggctggagtcttcatccgag
tccagcagctcctctaaagaggagttaccgactttggctcagatctttggaacatcagat
cgtcctcaagctgagattaaacatcagggagaaatctgcgaagctaacagactgaaggca
gtcggtgaagaaccactgggtcgtccagctggaagtccgacccccgatcagctcgactcc
agccaggcatccgtcgacttgttcggcacaccggaggaatgtgacgcccctgaaagctgc
gtcggcgtttgctttgattcgtcacaattctcaagcgaagttcttgttactcagcaaaag
atagaaatgcagaaggagctggtgaggctggagaagctgatggctctcgtgtcggaggtg
cttcaggagaaagaaggcagtcctgctgcagataccaatcagggctgtgaaaacaggggc
ccagaactggaggaccaggatcaagtccagagttcagacaggaaggacattttagatgca
gaaaccaaagcacctgatgataaagtggcagagtgtggtggcttttcagcaaacgctgtt
caagacttgactcatgcagaatcaactgtaaaagacacaaagacccctaattcaatttct
gcaaccaaaaaggcaaaaacttgtgattcacctccagattgccaagaagacaaagaaaac
aacagccctccgaaagaaaaatctaaagctaaacttgttctggtgtcgtccggattgggc
ccgaatgagcagataatggtgaaaaagtttgccaagagagtcggcggtcgcgtcgtttcc
cgggtgacaccagaggtgacacatatcataatgcgcacagatgatcagctggtctgcgaa
cgcacactgaaatacttccttggcattgcgggtcggaaatgggtcgtcagcttccagtgg
atttctgaatgcttcaaggaaaagaaactgctggaagagagttcgtttgaagtgagaggc
gatgtagtgaacggaccgaaccaccaggggccgttaagagcccgcaccgcaggaggcagt
aatctcctcatgaggggatacaagatctgcttcaaggggccgtttacagacatgtcaaca
gatgagatggagtggatggtggagctgtgtggcgctactgtagttaaagacccacttatc
cttgacggcgaacagaagtcccaccacatcgttattgttcagcccagatccgactcgccg
tcgtcgtcgtcctgctgtggcggtctgtccaggaacgccacagtcgtgacccgcggttgg
ttgctggattcggtcgctacgtacacgctgcagaacttcagcagctacaccgtgtga

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