Gambusia affinis (western mosquitofish): 122823092
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Entry
122823092 CDS
T07758
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122823092 (scn4aa)
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122823092 (scn4aa)
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Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
Lustrin_cystein
IQ
Motif
Other DBs
NCBI-GeneID:
122823092
NCBI-ProteinID:
XP_043958279
LinkDB
All DBs
Position
LG20:complement(11241870..11263093)
Genome browser
AA seq
1894 aa
AA seq
DB search
MANLLPPPGIAVFRPFTQESLAEIKRLAEERKKSAEAEGHDGGEPVVPHPDLEAGKSLPL
IYGDPPPELLNTPLEDLDPFYKAQNTFVVITKGNTIYRFNAEPACYILSPFSVIRRGSIK
ILIHSLFSMFIMITILSNCVFMTMSNPPAWSKTVEYVFTGIYTFEATVKVLSRGFCIGSF
TFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQS
VKKMVDVMILTVFALAVFALVGLQLFMGNLRHKCVRWPILMNEVFNTTIAVNESMYSNSS
FDFTEYIENPENQYFTEGSKDALICGNSSDAGKCPEGYTCMKAGRNPNFGYTSYDSFGWA
FLALFRLMTQDFWENLFQLTLRAAGRTYMLFFVVVIFLGSFYLINLILAVVAMAYYEQNQ
ATQLEAIEKEEEFQRLLEQLKNQEQQAQFHGSQATLTSKKSVSQHTLSEMEDNGHGLKQG
EAVNDCNGRVVPRLMIRAPTMEESAIDYEVKEKSLGSIHSTLHLEEPGLKKRSASAATVL
SAVAMEELEEAQRPCPPCWYKFADMFLKWDCCPTWIVFKKWMHFVVMDPFVDLTITICIV
LNTLFMAMEHYPMTPEFDNMLSVGNLVFTGIFAAEMFFKLIAMDPYYYFQVGWNIFDSII
VTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAI
IVFIFAVVGMQLFGKNYKDCVCKISSDCELPRWHMNDFFHSFLIVFRILCGEWIETMWDC
MEVAGPAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSAGDDDGEMNNLQIAIGRI
TQGIDWLKAFLIQRIQKILGKKPKEPDKDIMDDGKPKTEEIEMNHLDAGLTLKVADGISD
VPVQSQPSGFTVDGELNLKVPIAEAESDYDNLSDDDDDDDDDDDDDDDDDDEVDGEQDDD
EEDKLPESALRRDEQNTKNFEDESSIPEKVKYDDGDSSVCSTADYHPPEPEPEKKEEEEP
EPEEPEACFTDDCVTKWPCLTVDTTSGKGKKWWNLRKTCFTIVEHDWFETFIIFMILLSS
GALAFEDIYIERRRTIKIILEFADKVFTYIFVIEMLLKWVAYGYKTYFTNAWCWLDFFIV
DISLISLVANWMGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLL
VCLIFWLIFSIMGVNLFAGKFYRCINTTTEELFPMTEVSNRTECLALEEATQEARWINVK
INYDNVGTGYLSLLQVATFKGWMDIMYAAVDSREVEEQPSYEINLYMYIYFVIFIIFGSF
FTLNLFIGVIIDNFNQQKKKFGDQDIFMTDEQKKYYEAMKKLGSKKPQKPIPRPTNPVQG
IVFDFISQQFFDIFIMVLICLNMVTMMVETDDQSPEKENFLFKLNVAFIVVFTGECVLKL
FALRQYFFTNGWNVFDFIVVILSIAGTMLSDIIEKYFVSPTLFRVIRLARIGRILRLIKG
AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEAGIDDIFNFETFGG
SIICLFQITTSAGWDGLLLPMLNREPPDCDPEFENPGTDVKGNCGNPGMGMMFFCSYIIV
SFLVVVNMYIAIILENFNVAQEESGDPLCEEDFEMFNETWEKFDLDGTMFIEYSRLSDFC
DTLQEPLRVAKPNRLRLIGMDLPLVIGDRIHCLDVLMAVTQMVLGDTVEMAAMRDSIEAK
FILSNPTKDSFAPITTTVRHKEEQQAAVVLQRAYRNHLLKRCIRHAAFMHRLKRIGRNYN
DDDPPEKEGLLARRLGVLYVSNIDLTDEMELEVLESLTSQEPFNTDSERAHCHQEPPVQN
MIVVPAEITSQELLHSAPYQHPFTLQANLREPLV
NT seq
5685 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacctgctccctcccccaggcattgcggtcttccgcccgttcacccaggaatca
ctggcggaaatcaagaggctcgcggaggaaaggaagaaatcagcagaagcagaaggccat
gacgggggagaaccagtggtgccacaccctgatctggaagctggaaagagcttaccccta
atatatggagaccctcctccggagttgctcaacacgccgctggaggacctggaccccttc
tacaaagcccagaatacatttgtcgtgatcaccaaagggaacacgatttacaggttcaac
gctgagccggcttgttacattctcagcccctttagtgtgatcaggagaggatccatcaaa
attctcatacattcattatttagcatgttcatcatgattaccattctgtcgaactgtgtg
ttcatgacgatgagcaacccaccagcatggagtaaaactgtggaatatgtttttacagga
atttatacctttgaggctacagtcaaagtgttgtcaagaggtttctgtattggttctttt
acattccttcgagatccatggaactggctggatttcatggtgatcagcatggcctacgtt
actgagtttgttgaccttggcaatgtgtcagctctcaggacatttcgtgtacttcgagcc
ctgaaaacaattaccgtaattcctggcctgaagaccatagtgggggctttgatccagtct
gtgaagaaaatggtggacgtcatgatcctgaccgtttttgcccttgcagtctttgcactc
gttggcctccagcttttcatgggaaacctgcgccacaaatgtgtgcgatggcccattctg
atgaacgaagttttcaacactaccatagctgtaaatgagtctatgtactccaacagctct
tttgattttacggaatatattgaaaatccagaaaatcagtattttacagaaggcagcaaa
gatgcactaatttgtggcaacagctctgatgctggaaagtgcccagaaggatacacttgt
atgaaggctggaaggaaccctaactttggctacaccagttatgactcttttggatgggcc
ttccttgctctcttcaggctcatgacacaggacttctgggagaatcttttccagctgact
ctgcgagcagctgggaggacatacatgctgttcttcgtggtggtcatcttcctgggctcc
ttctacctcatcaacctcatcctggctgtggtagctatggcttattatgaacagaatcaa
gcaactcaactggaggccatcgaaaaagaggaagaattccagcggcttttagaacaacta
aaaaatcaagagcagcaggcacaatttcatggaagccaagccaccttgaccagtaagaag
tctgtgagtcaacacacattatcagagatggaagataatggacatggtctcaaacagggt
gaggctgtgaatgactgcaatggaagagttgttcctcgcttgatgattcgagcacccact
atggaggagtctgctatagattatgaagtcaaagagaagtcactgggctcgatacacagc
acacttcatctggaagaacctggcttgaaaaagagatctgctagtgctgcgacagtgttg
tctgcagttgccatggaagagttggaggaggctcagaggccctgtccaccttgctggtac
aaatttgcagacatgtttttgaagtgggattgctgccccacctggattgtttttaaaaag
tggatgcactttgtggtcatggatccctttgttgacctcactattaccatatgcattgtg
ctcaacaccctttttatggcaatggagcactaccccatgaccccggagttcgacaacatg
ctctcagtaggaaatctggttttcactgggatctttgcagctgaaatgtttttcaagctt
atcgccatggatccctattactatttccaagttggatggaacatttttgacagcattatt
gtaactctcagcctggtggagttgggtctggcaaatgtccagggtctgtcagtcctaagg
tcattccgtttgcttcgtgtcttcaaactggcaaagtcttggcccacactcaacatgctc
attaagattattggtaactcagtgggggctttggggaacctgactttggtgctggccatc
atcgtcttcattttcgctgtagtgggcatgcaactctttggaaagaactacaaggactgt
gtatgcaagatctcctcagactgtgagctgccacggtggcacatgaatgacttcttccac
tccttcctcatcgtttttcgcattctgtgtggcgagtggatcgagacgatgtgggactgc
atggaggtggctggacctgcgatgtgcttaattgtcttcatgatggtcatggtcattgga
aatctagtggtattgaacctcttcttggcgttgctgctcagctcattcagcggagacaac
ctgtcagcaggggatgacgatggagagatgaacaatctgcagattgctattgggagaatc
acacaaggcatcgattggttaaaagcatttctcatacagcgaatccagaaaatacttggt
aaaaaacccaaagagccggataaggacataatggacgatggaaagcctaaaaccgaggaa
atcgaaatgaaccatttggacgccggtctgactcttaaagtggcagatgggatttcagat
gtccctgtgcaaagccaaccctctggattcacggtggatggagagctcaatctgaaagtc
ccaatcgctgaagcagaatcagattatgataatctgagtgatgatgatgatgatgatgat
gatgatgatgatgatgatgatgatgatgatgatgaagttgatggtgagcaggatgatgat
gaagaagataaacttccagagagtgcactgcggagagatgaacaaaacacgaaaaacttt
gaagatgaaagtagtatcccagagaaagtaaaatatgatgacggggattcttcagtctgc
agcacagctgattatcatcctccggagcctgaaccagaaaagaaggaagaagaggaaccg
gaacccgaagagccagaggcctgttttactgatgactgtgtgaccaaatggccatgtttg
acggtggataccaccagtggcaaaggcaaaaaatggtggaatcttagaaaaacttgcttc
accatagtggaacacgactggtttgaaaccttcatcattttcatgatcctccttagcagt
ggggctctggcctttgaagatatatacatagaaaggcgacgaaccatcaaaataattctt
gagtttgcagacaaggttttcacctacatttttgtcattgagatgctcctgaaatgggtt
gcatatggctacaagacctacttcaccaacgcttggtgttggttggactttttcattgtg
gatatttccttgattagcttagttgcaaattggatgggctattctgatcttggtccgata
aagtcgttgagaaccctcagagcactgaggcctcttcgagcgctatcaagatttgaaggc
atgagggtggtggtgaatgctcttgttggagcgattccctccatcttcaatgtcctgctg
gtgtgtctgattttctggctcatcttcagcatcatgggagtcaatttgtttgcggggaag
ttctaccgttgcatcaacaccaccacagaggagctattccctatgactgaggtcagcaat
cgaaccgagtgcttggcccttgaagaagccacacaggaggctcgctggattaacgtcaaa
atcaactatgacaatgttgggacaggctacctctctctgcttcaagtggcaacttttaaa
ggttggatggacataatgtatgctgctgtggactcaagagaggttgaggagcaaccatcc
tacgaaatcaatctttacatgtacatctattttgtgatcttcatcatctttggttccttc
ttcaccctaaaccttttcatcggtgtcattattgacaatttcaaccaacaaaagaaaaag
tttggagaccaagacatttttatgactgatgaacagaaaaaatactatgaggccatgaag
aaacttggttccaagaagccacaaaagccaattccacgaccaacgaacccagtccagggc
attgtgttcgatttcatcagccagcagttttttgacatcttcattatggttttaatctgc
ctcaatatggtgaccatgatggtggaaacagatgaccaaagcccagaaaaagaaaatttt
ctctttaaattaaacgtggccttcattgttgtcttcactggagagtgtgtattgaagctc
tttgcattgcggcagtacttcttcaccaatggatggaatgtttttgatttcattgtggtc
atcttgtcaatagctggtacaatgctctcagacataattgagaagtattttgtatcccca
actctcttcagagtgatcagactagccaggatcggcaggattctgcgcctcattaaagga
gcgaagggcattcggacacttctctttgccctaatgatgtcccttcctgccctgttcaac
attggtctcctgcttttcctgattatgttcatcttttccatatttggcatgtcaaatttt
gcctatgtcaagaaagaagctggaattgatgacatttttaactttgagacctttggtggt
agcattatctgcttgtttcagattacaacatctgctggttgggatgggcttctacttcca
atgctgaacagggaacctccagactgtgaccctgaatttgagaatccaggcacagatgta
aagggtaactgtggaaacccggggatgggtatgatgttcttctgcagctacatcatcgtt
tcgttcttagtggtggtcaacatgtacattgccatcatcctggagaacttcaatgtggct
caagaagagagcggtgacccactttgcgaggaagactttgagatgttcaacgaaacttgg
gagaagtttgacttggatggaacaatgtttattgagtacagtcgactttcagatttttgc
gacactttgcaggagcctctcagggtcgccaaacccaatcggctccgtctgattggaatg
gatctgcccctagttattggggataggatccactgcttggatgttttaatggctgttaca
cagatggtactgggagacacagtggagatggcagcaatgcgggatagcattgaggctaag
ttcattcttagcaaccccacaaaagactcctttgcaccaattaccacaacggtacgccac
aaggaagagcaacaagctgctgtggtccttcaacgagcttatcgtaatcatcttctgaag
cgctgcatacgccatgctgctttcatgcaccgattgaagaggattgggagaaattacaac
gatgatgatccacctgaaaaagaggggctccttgcgcgaagactgggagttctctatgtt
agtaatatagaccttactgatgaaatggagcttgaggttttagaatctctgacaagccaa
gaaccttttaatacagactcagaaagggcccactgtcatcaggagcctcctgtgcagaat
atgattgtggttcctgctgaaataaccagtcaggagttattgcattctgccccttatcaa
catcccttcaccttacaagcaaatctgagagagccacttgtatga
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