Gambusia affinis (western mosquitofish): 122823590
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Entry
122823590 CDS
T07758
Symbol
irf3
Name
(RefSeq) interferon regulatory factor 3 isoform X1
KO
K05411
interferon regulatory factor 3
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04620
Toll-like receptor signaling pathway
gaf04621
NOD-like receptor signaling pathway
gaf04622
RIG-I-like receptor signaling pathway
gaf04623
Cytosolic DNA-sensing pathway
gaf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
122823590 (irf3)
04621 NOD-like receptor signaling pathway
122823590 (irf3)
04622 RIG-I-like receptor signaling pathway
122823590 (irf3)
04623 Cytosolic DNA-sensing pathway
122823590 (irf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122823590 (irf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122823590 (irf3)
04131 Membrane trafficking [BR:
gaf04131
]
122823590 (irf3)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
122823590 (irf3)
Membrane trafficking [BR:
gaf04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
122823590 (irf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
122823590
NCBI-ProteinID:
XP_043959301
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Position
LG20:complement(21425235..21435440)
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AA seq
466 aa
AA seq
DB search
MAHSKPLLIPWLKSSIDSERYPGVHWTNPEQTEFCIPWKHALRQDSSNEDVLIFKAWAEA
SGNGRAQGDPSVWKRNFRSALRAKGFKMVSDNKNDTANPHKVYRWPEESASGARSSSGSQ
EQEDGNDLNGYNPQGSGVVPFFNAPIYNPEDILIPAECPGSQDILQECLRGLNIGPGAED
TTGFQPPTEQQQLQDQLVIGAHPLPEQQQDPVMFEGAARETGLPEQPARPAGGGAAEGAG
YGDGQQAAQFLETVNQTRDGDHFKTHFRVTVFYRGVKVSEQEVPNEAGLRLVYRPDLNDA
VLDPETGLSIISLPCPVGILDHTQASLTQKILDNLGSLEVGMSQRVIYGQRHGEVKAYWS
FSKFDSSRQPREISKLNPEPLYQVKDFIRGLIDFFEKKESPPSSMFFCLGEKWPDLENRP
WEKKLIMVEVVPTSMELLKNMAVECGASSLQSVELQMSLEEMMDLY
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggctcactcaaaaccactgctgatcccatggctcaagtccagcatcgacagtgagagg
tatccaggtgtccattggaccaatcctgagcaaaccgagttctgcatcccatggaagcac
gcgctgagacaggactcctccaatgaggatgttctcatctttaaggcctgggcggaggcg
agtgggaacggccgggctcagggagacccctcagtctggaagaggaacttccggagcgcc
ctgagagcaaagggcttcaaaatggtgtccgacaacaagaacgacaccgccaacccacat
aaggtctaccgctggccggaggagtcggcgtcaggagcccgatcttcctctggatcccag
gagcaagaagacggaaatgatctgaacggctataatccccaggggagtggggttgtgcca
ttctttaatgcacctatttataatccagaggacattctgatcccagcagaatgcccaggc
agccaggacatcctccaggagtgtctgagaggactgaacatcggccctggagcagaggac
accacgggctttcagcctcctactgagcaacagcagctgcaggatcagctcgtgattggt
gcgcacccgttgcctgagcaacagcaggatccagtgatgtttgagggtgcagcccgtgaa
actgggttgccagagcaaccggcacgtccagcgggtgggggagcggcggagggggcgggc
tacggcgacgggcagcaggcagcgcagttcctagaaacggtgaaccagaccagagatgga
gatcatttcaagactcatttcagggtgactgtgttctacagaggggtgaaggtttctgag
caggaggtccccaatgaagctggactccgtttagtttacaggcctgatctaaacgacgca
gttttggatcctgagacgggcctctccatcatctctctgccgtgcccagtaggcatcctg
gatcacacccaagcctctctgacccaaaagatcctggacaacctgggcagcctggaggtg
ggcatgtcgcagcgcgtgatctacggccagcggcacggcgaggtcaaagcctactggagc
ttctccaagtttgacagcagcagacagccgcgtgagatttctaaactgaatcctgagcct
ctttaccaggtgaaggacttcatccgaggattaattgacttttttgagaagaaggaatcc
ccaccatcctccatgttcttctgtctcggggaaaagtggcctgacctggaaaacaggcct
tgggagaaaaaactcatcatggtggaggtggttccgacttcaatggagcttctgaagaac
atggctgttgagtgtggcgcctcctccctgcagtctgtggaactgcagatgtcactcgag
gaaatgatggatctttactga
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