Gambusia affinis (western mosquitofish): 122825185
Help
Entry
122825185 CDS
T07758
Symbol
abcd4
Name
(RefSeq) ATP-binding cassette sub-family D member 4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf02010
ABC transporters
gaf04146
Peroxisome
gaf04977
Vitamin digestion and absorption
gaf04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122825185 (abcd4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122825185 (abcd4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
122825185 (abcd4)
04980 Cobalamin transport and metabolism
122825185 (abcd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122825185 (abcd4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gaf02000
]
122825185 (abcd4)
Enzymes [BR:
gaf01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
122825185 (abcd4)
Membrane trafficking [BR:
gaf04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
122825185 (abcd4)
Transporters [BR:
gaf02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
122825185 (abcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
AAA_22
AAA_7
FtsK_SpoIIIE
AAA_5
DEAD
DUF87
NACHT
nSTAND1
T2SSE
Motif
Other DBs
NCBI-GeneID:
122825185
NCBI-ProteinID:
XP_043962299
LinkDB
All DBs
Position
LG22:11608934..11615971
Genome browser
AA seq
621 aa
AA seq
DB search
MPCLEKSKERRTNRPKLDWTFVQRFCSIQRVLFPSWSSQSVLMFGTLLGLTLTEQLIIYQ
VGILPSHFYNVLADKDYSGFRSLMGTAMVLILLNSTLKSLDQYICNQMYVSWRTTLTESL
HSSYFQGRVYYILNVLQEDIDNPDQRISQDVERLCKQMSNMASRLIVSPFTISYYTYQCF
RSTGWIGPVSIFGYFVVGTIANKILMGPIVSTLFEQEKLEGDFRFKHMQIRVNAESAAFY
RAGKVEHMRTDRRLQALLQTQKSLINKELWLYIGVNTFDYLGGFLSYIIIAIPIFTGVYD
GLTPGELSALISKNAFVCIYLINGFTQLIDLSTTLSDVAGYTHRIGELREAMDDILHKQC
DYDPASGDSYDFDSDFNVHAGPVDTAFILDHLSYKSPYSDQLLVEDLSLKISQGTHLLVV
GNTGTGKTSLLRVLNRLWEAHSGFVQMTTCFGPRGTLFLPQKPYMTDGTLREQVIYPLKD
IYPASASFSGSVDDDRIMKFLELAGVSSLFKRTGGLDEKVDWSWYDVLSPGEMQRLSFAR
LFYLQPKYAVLDEATSALTEEAEAQLYRTCKQLGMTLISLGHRSSLEKHHDMQLKLCGEG
RWELTKLKGTSGTLSLRQEAT
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgccttgcctggaaaagtcaaaagaaagaaggacaaacaggccaaaactagactggacg
tttgtgcagaggttctgcagcatccagagggttttgttcccatcatggtccagtcaaagt
gtgctaatgttcggaactttgttgggtctcactctgacagagcagctgatcatttaccag
gtgggcatcctccccagtcacttctacaacgtgctggcagacaaagattattccggcttc
aggagtctgatgggaacagctatggtgctcattttgctcaactccacgcttaaaagtctt
gaccagtacatttgcaatcaaatgtatgtcagctggaggacgaccctgactgagagcctt
cattcgtcctacttccaggggagagtttattacatactaaatgtgctccaagaggacatt
gataacccagaccagcggatcagtcaggatgtggagaggctttgtaagcagatgagcaac
atggccagccgcttgattgtctcaccgttcacaatttcttactacacctaccaatgcttt
cgcagcaccggatggattggtcctgtgagtatctttggatattttgttgtcggaactatt
gccaataaaatcctcatggggcccattgtgtccactctgtttgagcaagagaaactggag
ggagacttcagatttaaacacatgcaaattcgtgtcaatgcagagtccgccgctttttac
agagctggtaaagtggagcacatgagaactgaccgaaggctgcaggccctgctgcagacc
cagaagagcctcatcaacaaggagctctggctttatattggagtgaacacctttgattac
ctcggagggttcctcagctacattataatcgccattcccatcttcactggtgtttatgat
ggtctcactccaggggaactcagcgcactcatcagtaagaatgcctttgtgtgcatctac
ttgataaacggcttcacgcagctaatagacctgtctactactctgtcagacgtggcggga
tacacccacaggattggggagctgagggaggcgatggatgatatccttcacaagcagtgc
gattacgaccctgcatctggtgatagctacgactttgacagtgactttaatgtccatgcg
ggccctgtggatacggccttcatcctggaccacctttcgtacaaatctccatactcagac
cagctcctggtggaggatctgagtctaaaaatcagccaggggactcacctgctggtggtt
gggaacacaggcacagggaagacgtccctgctgagggtcctcaaccgtctctgggaggca
cacagcggttttgtccagatgaccacatgttttggtcccagaggaaccctcttcctacct
cagaaaccctacatgaccgacggcactctgcgtgagcaggtgatttacccgctgaaggat
atctaccctgcatcagcctcattttcagggtcagtagatgatgatagaattatgaaattc
ctggaactagcaggagtgtcaagtctcttcaaacgaactggtggtctggatgagaaggtg
gactggagctggtatgatgttctgtctccgggtgaaatgcagcgcctctcctttgcacga
ctcttctacctgcagccgaaatatgcagttttagacgaagccaccagtgctttaacagag
gaagcagaagctcaactgtaccggacctgtaaacagctgggcatgactttgatcagtctg
ggacaccgtagcagtcttgaaaagcaccacgatatgcaactgaagctatgtggagaaggg
cgatgggagttaaccaagttaaaaggaaccagcgggaccctcagcctcagacaagaagcc
acgtga
DBGET
integrated database retrieval system
