Gambusia affinis (western mosquitofish): 122825466
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Entry
122825466 CDS
T07758
Symbol
dse
Name
(RefSeq) dermatan-sulfate epimerase isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
gaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
122825466 (dse)
Enzymes [BR:
gaf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
122825466 (dse)
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Gene cluster
GFIT
Motif
Pfam:
DUF4962
Motif
Other DBs
NCBI-GeneID:
122825466
NCBI-ProteinID:
XP_043962826
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Position
LG22:23424137..23465525
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AA seq
956 aa
AA seq
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MRTHTRGAPTVFFIRLLWPLLAPVPAAEVDPAGGIPFMGGNYDSHPMLYFSRGDVEELQY
AAAGTHRQMARRIREAGETMLEHPEEYLPPWSPTEFTARWNEVYGNNLGVLSMFCLLYPH
RAGALDLAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYEYLNKGQQDRFL
QVIGNASRLMYEKSYVRGWGFQYLHNHQPTNCVALLTGSLVYMTQGYLQEAYLWTKQVLS
IMEKSMVLLQDVTDGSLYEGVAYGTYTTRSLFQYMFLVQRHFAIGHFSHPWLLKHFAFLY
RTILPGFQRTVAIADSNYNWFYGPESQLVFLDRYVLRNGSGNWLADLINQNRITEGPGQA
GKGQRWCTLHTEFIWYDPGLIPKPPADFGTSQLHYFEDWGVVTYGSALPSGTNSSFLSFK
SGKLGGRAIFDIVHNNKYKEWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYT
LLNNVGLFGSTLSGSCFKPWAGQVTEACDSKWLKYKVGLAADAQGRVEAAIKREGMVFIR
GEGHSAYNPELKIKNFQRNLLLLHPQLLLMVDHIHLDPGSPTRAMSAFFHNTELPFQSTK
VDGVHGAFVTHGKENYKMFWMDDTNSSNKGVVGYWSYPRGYPYNGSNYVNVTMPLRYPHT
RVAYIFFGPGLDVQSFSLRGDDQRVDIYLSTKDHTYTIYLLTGEVTSKPVFAIVLLDHKK
IVFERAAAVVDNFPVEVEEYASVMEDNLQHVKPVFQQMERHILGQVLNTASFRRTAERLL
QFSDKKKTEEVIKKMFAMSKKQNKAKGGKRLNLGEKLSESLPDIFAQIEVNEKKERQRIS
KRTYEDSPEEGDADSRAFVDYPAGHRNRKGGLVKGRRFKEVHIVTTARSEGLSGNPSYIR
LFLLMNTTTFFLLLAVLLTRFQRGRSLHTQRCFYTIVLIDCFILLYLYSSCSHTQC
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagaacccacacccgaggggcccccacagtcttcttcataagactgctgtggcccctg
cttgctccagttcccgcagctgaagtggaccctgccggcggaattcccttcatgggaggc
aactatgacagtcatcccatgttgtacttcagccgtggggatgtggaggagctccagtac
gcagcggcaggaactcatcggcagatggccaggaggatccgagaggccggggagaccatg
ctggagcacccagaggagtacctgcccccttggagccccacagagttcaccgcccgctgg
aatgaggtctatggaaacaatttgggtgtgctgtccatgttctgcctgctatacccgcac
agggccggggccctcgacctggccaaggactacatggagaggatggcggctcagcctagt
tggttggtgaaggatgccccctgggatgaagttcctttggcacactcgctggttggattt
gccacggcctacgacttcctgtatgagtacttgaacaaaggccaacaggatcgcttcctt
caggtgataggcaatgcatctcgcttgatgtacgagaagtcctatgtacgtggctggggg
ttccagtacctgcacaatcatcagcccacaaactgtgtggctctgctcaccggaagcctg
gtctacatgacccaaggttaccttcaggaagcctacctgtggacaaagcaagttctgtcc
atcatggagaagtctatggtccttctgcaggacgtgacagatggttcactttatgagggt
gtggcctatgggacctacaccacccgttccctattccagtacatgtttctggtgcagcgc
cactttgccatcggccacttcagccatccttggctactgaagcactttgccttcctctac
aggaccatcctaccaggatttcagcggaccgtggccatcgcagattccaactacaactgg
ttctacgggccagagagtcagctggtctttttggatcgctatgtgttgcgtaatggcagt
gggaattggctggcagatctgattaatcaaaacaggattacagaagggccaggccaggct
ggaaagggccagcgatggtgcacgctgcacacggagttcatttggtatgaccctggcctg
atccccaaacccccagctgactttggaacgtctcagctccactacttcgaggactggggt
gtggtgacgtatggcagtgctttgccttctggcaccaacagctcctttctgtccttcaag
tctgggaaactagggggacgcgccatctttgacatcgttcacaataacaagtacaaagag
tggatcaaaggctggaggaacttcaacgctggtcacgagcacccagatcagaactctttc
acctttgcacccaacggtgtcccgttcatcaccgaggcactgtatggacctaagtacact
ttgttaaataatgtgggattgtttggctcaaccctatctggaagctgctttaaaccatgg
gctggacaagtaacagaagcctgtgactctaagtggttaaagtacaaggtgggccttgca
gctgatgcccagggcagagtggaagctgctataaagagagagggaatggtcttcattcgt
ggcgaagggcattcagcttataacccagaactgaaaatcaagaacttccagaggaacttg
ctgcttcttcacccacagcttctgctcatggttgaccacatccacttggacccaggcagc
ccaaccagggccatgagtgccttctttcacaacacagagctgccatttcagagtacaaaa
gtagatggtgttcatggagcgtttgtaacacatgggaaggagaactataagatgttttgg
atggatgacaccaactccagtaacaaaggggtggtgggttactggagttaccctcgaggg
tatccctataatggctccaattacgtgaatgtaacaatgccactgaggtacccgcacacg
agggtggcctatattttctttggaccaggcttggatgtacagagcttcagcttacgtggg
gatgatcaacgggtggatatttacctctccaccaaagaccatacctacaccatctacctt
ctgacaggggaggtcaccagcaagcctgtgtttgccatagtgctgctggaccacaaaaag
attgtgtttgagagagcagcagctgttgtagacaacttccctgtggaagttgaagaatat
gctagtgtgatggaggacaatctccagcatgtcaaacctgtcttccagcagatggaaaga
cacatcctgggacaagtcctcaacactgccagcttccgtaggaccgctgagcgcctcctc
caattctctgacaagaagaagacagaggaggttattaagaagatgtttgctatgtccaag
aaacagaacaaggccaaggggggaaagaggttaaaccttggagagaagctgtccgagagc
ctgcctgacatttttgcacaaattgaggtcaacgaaaagaaagagagacagaggatatca
aagcgtacatatgaggacagtccagaggaaggggatgcagactcgagggcctttgtggat
tatccagctggtcacaggaacaggaaggggggcttagttaaaggccgcaggtttaaggag
gttcacattgtgaccacagcaaggagtgaggggctctctggtaacccctcctacattaga
ctgttcctgcttatgaacaccactaccttcttcctactgctggctgttctgcttactcga
tttcagagggggcggagcctgcacacgcagaggtgcttttacaccatcgttttgatcgac
tgcttcatcctgctgtacctttactcatcgtgttctcacacacagtgctga
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