Gambusia affinis (western mosquitofish): 122829217
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Entry
122829217 CDS
T07758
Symbol
nup210
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein 210
KO
K14314
nuclear pore complex protein Nup210
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122829217 (nup210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122829217 (nup210)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122829217 (nup210)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_3rd
Ig_NUP210_2nd
Ig_NUP210_1st
Ig_NUP210_9th
Ig_NUP210_4th
Ig_NUP210_7th
Ig_NUP210_15th
Ig_NUP210_6th
Big_2
NUP210_Ig
TMEM61
Motif
Other DBs
NCBI-GeneID:
122829217
NCBI-ProteinID:
XP_043969534
LinkDB
All DBs
Position
LG01:31065243..31097538
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AA seq
1873 aa
AA seq
DB search
MSLVKFLVLFFITVTRVYGSSKLNIPKVLLPLARSTKINFTLETTEGCYRWSSTRPEVAS
IQPVEEDADRGCSRKAVLQALSTQPTRLTSIIFAEDVVSGQVLRCDAIVDIISEIQIVST
TRELHLEDSPLALRIHALDSEGNTFSTLAGLVFDWTLVKDVDVNGFTDSYNSLRVLKFSE
STYTPPGYISEMERVGKQGDIILVSGLKTGHAKLKAKIQESLYKDVGAAEVRLLILENIL
LSPAHDVYLMAGASIRYRVLKIRQGTITEVTMPCDQYELHLRNSVVDPNGDAGVSVASLD
QSTSKVTGVQMGHINVVLDHKSLRMQGVSRLPNSTLYVVEPAYLGFKIHPGESWVLETGR
VYDILIEVFDKSGNKIYLSDNVRISTVFPKEYFEVLDSSVNGSYHHVRPLKDGLTLIDAT
LTAVEDENGKVHALVNPVHNEQDVEIYNPIVLTPSILTFPWQPKVGAYQYTIKATGGSGN
FTWTSSNTDVATVTVKGVMTTVRDIGVTAIYAHDLRNPHHFGQMKVYVVEPVAMDFAPCP
VEARLGQDLELPLRIFGLLEELEMERVMLSDCSHFDLLVEEENQGVFEVLDGKLAPGQKH
CSGVQAKALTPGYTMLTVSYTHGNVHLSAKITVAAYLPLRAVDPVSVAVVTLGSSKDMLF
EGGPRPWVLEPSKFFCSSRAEDESSVSLDLITPSCQNCNRHWLRATCRVLGEQVLEITVG
NKATVTNPFPAVEPAVVKFVCALPSRLTLVPVYTSPQLDLACPLMQQNKQVVPVSNYRNP
VLDLAAFDQQGRKFDNFSSLDILWESSKESLASIEPTMPMDLQLFEDSKKQMKLHGRQTV
LVHQQTGIAAITVTAVGYQVPHLKVAKVPSPYEPLTSVSATLELLLVEDVKVFPERVTIY
NHPDVRLDLTMQEGSGHFFMNTSMKGIVDVVLQEAQGEAWVSPVHTGTVSVMVHDLCLAF
PAPAKSVVHVSDILEVNVRVVDKVQIGKFVKAYVRVLDDNRKPFSASYFQSMKLKLKAAS
VIVSLTPLAELTESDTAVFRVKGLSIGQTTLSAVVVDKNGRKIASAPQQIEVFPPFKLIP
RKMTLLIGAMMQITSEGGPQPQSNILFSISDEEIASVNRTDLRIQLCVDFLPLTLNXKFF
FDLXDQVEVEVVILSAIRIRAPVTRIKTGAQMPVYVMGLTNSQTPFSFGSVVPSLIFSWS
TTKRDILDVHSRHTEANVELQSEHNFGMTVTGRTRGRTGLKVVLRVSDSNAQQLEGNVLE
LRDEIQIQVYDKLHVIHPQVEAEEILMAPNSALKLQTNRDGVGVLSYRMLDCPDQLVVAQ
VDNKGLLSSGSLTGMCSLLVTSQEIFGVNQTLILTVKVVPVSYVRFSASPVLNTLTREGP
SAFPLGILLTFTVHFHASTGEAMHSSNSQLTFSTNRDDLVQLGVGPTNHSVTVRTVNVGL
TLLALWDNENMGVADYVPLPVDHAIYMDYANKLVVGDVVCFQAKLTNPDGAPGTWSSSAD
GVLQVDPKSGAAVARDSGVVTVFYEISGVLKTYREVIVEAPTTTAAMAQPSPVRSGKETK
VLLTTRERGTNLIGTCSPIQIAAIAKLEPEKSVSCLLSFTSDTIDFSPNDVFKTHTGFDS
SIGLYTCTMTLQPTTNQQTRVLSVSMTNLLVKAGLVGSVFTGEQVSNQLTIEPGLYSDQT
ELLLSNMHPSAEFTVYGPPAVLSTIEVTSTSPSLSIYEKEVQQGFPSYTKYIVNAVDPHS
AVSASVDISSASSGQSLVIPVSFIHVNDPNAAKQAAPPTFIEDNNSFHSFINCYQMMFCT
LFALLAGTAIIIIVLHSLLSPKEQSYHPAFIQRTPPPLTGLDSPVANSFNRMTPRVSPNS
TYRSQLYSPDYKS
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggtaaaatttttagtgttattttttataaccgtcacgcgggtctacggttcg
tcgaaattaaatatccccaaagttttgctaccacttgcgagaagtacaaaaattaacttc
acactggaaacgactgaaggctgctacagatggtcttccactagacctgaggttgcaagc
atccagcctgtggaagaggatgctgacagaggctgctcccggaaggctgtcctgcaggct
ctgtccacccagcccaccagactgaccagcatcatttttgctgaagatgttgtctctgga
caggtgctccgctgcgacgccatcgttgacatcatcagtgagatccagatcgtctccacc
accagagagctgcatcttgaagactctccactggcgctcagaattcatgcactggactca
gaaggaaataccttctctacccttgccggtttggtgtttgactggaccttagtgaaagat
gtagatgtaaatggattcacagactcctacaattcattacgggtgcttaaattctcagag
tccacatacactcctcctggatacatatctgaaatggagcgagtgggcaaacaaggtgac
atcattctggtgtcaggactgaaaacaggacatgctaagttaaaggccaaaatacaagag
tctctgtataaggatgtgggtgctgctgaagtgagactgctgattttagagaacatcctg
ctgagccctgcacacgatgtctacttaatggcaggagcttccatcagatacagagtcctc
aagataagacaaggcactatcacagaggtcacaatgccttgtgatcagtatgaactacac
cttagaaacagtgtggtagatcccaatggagacgcaggagtcagtgtggcctctcttgat
cagagcacctctaaagttacaggagttcaaatgggacacatcaatgtggtgttggatcac
aagagccttcgaatgcaaggagtgtctcgcctccccaacagcacgctctacgttgttgag
ccagcctacctcggttttaaaattcatccaggagaaagctgggttcttgaaacaggcaga
gtgtacgacattcttatcgaagtgtttgataagtctgggaacaaaatttacctctctgac
aatgtccgtataagcactgtttttcctaaagagtattttgaggtcctggattcttctgtg
aatggatcatatcatcatgtcagacctctcaaagatggtctcactcttattgatgctacc
ctaacagctgttgaagatgaaaatggaaaggtccatgcactcgtcaacccggtgcacaat
gaacaggatgtggaaatttataaccctatagtcctcactcccagtattctcacgtttcca
tggcaaccaaaagttggagcatatcagtacacaataaaggcaactggtggaagtggaaat
ttcacctggacttcatcaaatacagatgtggccacagtgactgtgaaaggagtgatgacc
acagtccgtgacattggtgtcactgcaatttatgctcatgatctacgtaacccacatcac
ttcggacagatgaaggtatatgttgttgagcctgttgccatggactttgctccatgtcca
gtagaagcccgcctgggccaagatctggaactgccccttcggatctttggtttgctggag
gagttggagatggagcgagtcatgttgagcgactgctcccactttgatctgctggtcgag
gaggagaaccaaggagtgtttgaagtgttagacgggaagctggctcctggccagaagcac
tgcagtggagtgcaagccaaggccctgactcctggctacacgatgcttactgtcagctac
actcatggcaatgtgcatctcagtgccaagatcactgttgctgcctacctccctctcaga
gcggttgaccctgtgtcggtggctgtagtcacacttggatcttccaaagacatgttgttt
gagggaggaccacgtccttgggttttagagccctcaaagtttttctgttcttcacgagcc
gaggatgagagcagcgtgagcctcgatctgattactccttcctgtcagaactgtaatcgt
cactggcttagagcaacctgcagggtgctgggagaacaggtgttagagattacggtgggg
aacaaggccactgtgaccaatccatttccagctgtggagccggcagtggtcaagtttgtt
tgtgcgcttccatcacggctcacactggttccagtttataccagtccacagctggactta
gcctgccctctgatgcagcagaataaacaagtggtgcctgtttcaaattatcggaacccg
gtgttggacttggcagcttttgatcagcaaggaaggaaattcgacaactttagctcttta
gacattttgtgggagtcatcaaaggagtccctggctagtattgagcccactatgcccatg
gaccttcaactgtttgaagacagcaaaaaacagatgaaactacatggacgtcagacagtt
cttgtccatcaacagacaggaattgctgccattactgtgacagctgttggataccaggtt
ccacatctaaaagttgccaaagttccaagtccttatgaacctttgacatctgtctctgcc
acactggagcttctgttggttgaagatgtgaaggtttttcctgagagagtgactatttat
aaccacccagatgtgcggttggatctgactatgcaagaaggttcagggcacttttttatg
aacaccagcatgaaggggattgtggatgtcgtgctccaagaggcacaaggcgaagcttgg
gtttctccagtccatacagggacagtttcggtgatggttcacgatctttgtctggctttt
ccagcacctgccaaatcagtagttcatgtttctgacatcctggaggttaatgtcagagta
gttgacaaggtgcagattggcaaatttgttaaagcttatgtcagagtgttggatgataac
aggaagcccttctcagccagctatttccagtccatgaaattgaaactcaaggcagcctct
gtaatagtgtctctgactcctttagcagagctgacagaaagtgacacggcagtgtttcgg
gtgaaaggactctccattggtcagaccaccttgtcagctgttgttgtggataaaaacggg
agaaaaatagcctcagcaccacagcaaattgaggtgtttccgcctttcaagcttattccc
aggaaaatgactctgttaattggggcaatgatgcagatcacatctgagggtggtcctcaa
ccccaatccaacatcctgttttccatatctgatgaggaaatagcttctgttaataggaca
gatctcaggattcagctgtgtgtggatttcttacctttaactttaaatnncaaatttttc
tttgacttgtaggatcaagtagaggtagaagttgttattctgtcggccattcgaatcaga
gcaccagttacaagaataaagactggagcacagatgccagtatacgtaatggggctgacc
aatagccagacgcctttctcctttggcagtgttgtgcctagtctcattttttcttggtct
accactaagagagacattctggatgtccactccaggcacactgaggctaatgttgaactt
cagtcggagcataattttggcatgacagtgacagggagaacaagaggccggactgggctg
aaggtggttctcagagtttctgactcaaatgctcagcagctagagggaaatgttctggag
ctcagagatgagatccagatccaggtctatgacaagctacacgtgattcatcctcaagta
gaagctgaggagatcctgatggctccaaactctgccctcaagctccaaactaacagggat
ggtgtgggtgtgctctcctaccggatgctggattgccctgaccagcttgttgttgctcaa
gttgacaataagggcctcctctcatctggttctctcactgggatgtgttctctactggtc
acctcacaggagattttcggtgtcaatcaaactctcatcctcactgtgaaggtggttcct
gtgtcctacgtccgcttcagtgccagtccggtgctgaacactctcactagagagggcccg
agtgcctttcctctgggaatcctgctcaccttcactgtccactttcatgctagcactgga
gaggccatgcacagctcaaactcccagcttacattttctacaaacagggatgatctggtc
cagctgggagtcggccccactaaccactcagtgacagtgagaacagtcaatgtaggtctc
acacttctggcactgtgggataatgaaaacatgggcgtggcggactacgttccacttcct
gttgatcatgctatctatatggattatgccaataagctggttgtgggtgatgtggtctgc
ttccaagccaagctaacaaacccagatggagctcctggcacatggagttcctctgcagac
ggtgttctccaggtggaccctaaaagcggggcagctgtagccagagactctggcgtagtg
actgtgttctacgagatatctggtgttctgaaaacctacagagaggtaattgtggaagcg
cctactacaacagctgctatggctcaaccttcacctgtcaggtctggaaaggagacaaaa
gttcttcttactaccagagagagaggaaccaacctcatcggaacctgttcgcctatccag
atagcagctattgcaaagcttgagccagagaaatctgtcagctgccttctcagcttcacc
agcgacactatcgacttctctcccaacgacgtgttcaaaacacacacgggctttgactcc
agtattggtctctatacttgcacaatgaccctgcagcccacgactaatcaacagacccgt
gtgcttagtgtttccatgaccaatctgctggtgaaggctggcctagttggcagcgttttc
accggagagcaggtcagcaaccagctgaccatcgagccggggctttactcggaccagacc
gagctgctgctctccaacatgcacccgtctgctgagttcacagtttacggcccccccgct
gttctgtccaccatcgaggtgacgtccacttctcccagtctttccatctacgagaaggag
gttcagcaaggattccccagttatacgaagtacatcgttaacgctgtggacccccattca
gcagtttcagcttctgtcgacataagcagtgcttcttctggccagagtttggtcatccct
gtcagttttattcatgttaatgatcccaacgctgccaagcaagcggctcctcctactttc
atagaggataacaactccttccacagcttcataaactgctaccagatgatgttctgcacc
ttgttcgctctgctggcgggcacagctatcatcatcattgtcctgcactctttgttgtct
ccaaaggagcagtcgtatcacccggctttcatccagagaacaccgccacccctcactggt
ctcgactcgcccgtagcaaattctttcaaccgcatgacgccgagagttagtccaaacagc
acgtacagatcgcagctctattctccagattacaagtcctga
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integrated database retrieval system
