Gambusia affinis (western mosquitofish): 122829639
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Entry
122829639 CDS
T07758
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122829639 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122829639 (nthl1)
Enzymes [BR:
gaf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
122829639 (nthl1)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122829639 (nthl1)
Prokaryotic type
122829639 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
MMTV_SAg
Motif
Other DBs
NCBI-GeneID:
122829639
NCBI-ProteinID:
XP_043970315
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Position
LG04:complement(21477507..21480750)
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AA seq
402 aa
AA seq
DB search
MLRNVRCETRTLCYVVQTLKMSSPYFMQSSAVLTRSSSHGAGGGPAASLRSKLSSRQGAV
DAVPARQVKVEAVEATVSEEKPSLTPSSSDGCQERLRPVAEIEASSLLPRGRRRRQVKVE
YDGDDGASRVKAKHWEPPNWTKQLGFIREMRSRRDAPVDNMGAEKCYDTQAPAHVRRFQV
LVSLMLSSQTKDQVTGAAMQRLRAHGCTAENIVATDDKKLGELIYPVGFWRNKVKFLKLT
SAMLVTEFGGDIPNSVEGLVRLPGVGPKMAHLAMDIAWDQVSGIGVDTHVHRISNRLGWL
KKPTKNPEDTRKALEEWLPRELWSEINWLLVGFGQQVCLPVSPLCSVCLNQHSCPSAHKC
SPAKRPKPGSPRSPGPSRKFKVESEQEDDARSKSAANQTPPD
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtaatgtccgctgtgagacgaggacactgtgttatgtagttcagactttgaaa
atgagttctccgtatttcatgcaaagcagcgctgttctcacccggagcagcagtcacggt
gcgggcggtggacctgcggcctctctgaggtccaaactcagcagcagacagggggctgtg
gacgccgttcctgcacggcaggtgaaggtggaggcggtggaggcgacagtatccgaagag
aagccctctttgaccccttcatccagcgatgggtgccaggaacgcctccggcctgtcgca
gagattgaagcgtcatcgctgcttcctcgcggtcgcaggaggagacaggttaaggtggag
tatgacggagacgatggcgcctcccgggtaaaggcgaagcactgggagcctccgaactgg
acgaaacagttgggtttcatccgtgaaatgaggagccgtcgagacgccccagtggacaac
atgggagctgagaaatgctacgacacacaagcccccgcacatgtgaggcgtttccaggtg
ttggtgtcgctcatgctgtccagccagacaaaggaccaggtgacgggcgcagcgatgcag
aggctccgggcgcatggctgcactgcagagaatatagtcgccaccgacgacaaaaagctg
ggagagctcatctatcccgtcggcttctggaggaacaaggtaaagtttctgaagctgacg
tcggccatgctggtgacggagttcgggggagatatcccgaacagcgtggagggtctggtt
cgcctgccaggagtcggacctaagatggcccacctggctatggacatcgcctgggaccaa
gtgtctggcataggagtggacacacacgtgcatcgcatctccaacaggctgggctggctc
aagaaaccaaccaagaacccagaagacacacgcaaggccctggaggagtggttgccaagg
gagctgtggagcgagatcaactggctgctggttggttttgggcagcaggtttgtcttcca
gtcagcccactctgctccgtgtgtctgaaccagcacagctgtccatctgcacacaaatgt
tctcccgcaaaaagacccaaacccggatcgccacgctctccaggtccatcgcgcaaattt
aaggttgaatctgaacaggaagatgatgccagaagtaaatcagcagcaaaccagacacca
ccagactaa
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