Gambusia affinis (western mosquitofish): 122830053 Help Entry 122830053         CDS       T07758                                  Name (RefSeq) slit homolog 1 protein-like   KO K06838   slit 1 Organism gaf  Gambusia affinis (western mosquitofish) Brite KEGG Orthology (KO) [BR:gaf00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:gaf00536]     122830053 Glycosaminoglycan binding proteins [BR:gaf00536]  Heparan sulfate / Heparin   Axon guidance molecules    122830053 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LRR_8 LRR_4 LRR_5 EGF Laminin_G_2 Laminin_G_1 LRR_1 LRR_9 EGF_TEN LRR_14 LRRNT LRRCT hEGF EGF_Teneurin EGF_MSP1_1 EGF_2 EGF_CA EGF_DL_JAG Motif Other DBs NCBI-GeneID:  122830053 NCBI-ProteinID:  XP_043971034 LinkDB All DBs Position LG04:complement(14600889..14660112) Genome browser AA seq 1555 aa AA seqDB search MPARRRKDGAGSAAGLWTMLAWAVLAGPGGAEGCPAPCSCLGNTVDCHGRGIHSVPKNIP RGTERLDLNENNLTVITKTDFSGLKHLRVLHLMENKISSIERGAFDELKELERLRLNRNR LSQLPELLFQKNEALSRLDLSENAIQAIPRRAFRGATDIKNLQLDKNHITCIEEGAFRAL RSLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNALRCDCHLAWLSPWLRQRSALGLYT QCSSPPALRGLNLAELRKSDFACSGHSGSAFVQPCSLASGSCPPMCSCSNNIVNCRGRGL TAIPAHLPEAMTEIRLEQNGIKSVPPGAFSSYKKLHRIDLSNNQISEIAPDAFHGLRALN SLVLYGNKITELPSGVFDGLVSLELLLLNANKIHCIRAAAFKDLENLALLSLYDNKIQSL AMGTFSSLHSIQTLHLAQNPFVCDCHVKWLADFLGSNPIETSGARCASPRRLANKRIAQI KSHKFRCSAKEQYHIPGTEDRRLSYECNSKPVCPAKCRCEANVVDCSNLRLTKFPEHLPP STEELRLNNNDLSMVEATGTFKGLSHLKKINLSNNKILEIEDGAFEGASSVGELHLTANH LESVRGSMFKGMEALRMLMLRNNRISCIHNSSFTGLTNVRLLSLYDNQLTTILPGAFDTL PNLSTLNLLANPFNCDCHLSWFGAWLRSRRIVTGNPRCQSPAFLRGIPLQDVAVPDFRCE DGSVLEDRSCVAGPQCPSQCSCMDTVVRCSNKHLQALPRGLPRNITELYLDGNQFTSVPK ELATFKYLQLVDLSNNKINSLSNDSFSNMSQLTTLILSYNSLRCIPPLALAGLHSLRLLS LHGNDISELQQGIFSDLASLSHLAIGANPLYCDCRLLWLSDWVKSGYKEPGIARCAGPQG LEGKLLLTTPADKFQCLGPVDISVQAKCTPCVTSPCQNQGTCQIHQTQQYTCACKSGFTG KHCETPIDACVSNPCTYGGSCLRDEQTGGFSCACAFGFHGTFCEVNVDDCEDHGCDNGAT CVDGVGNYTCLCPPNYRGLLCEEEDDVCSPGRNPCQHQSTCISSPTGPRCVCIPGWVGPD CGIDYNECADHRCQNSAQCVDHLDGYSCVCLPGFSGEFCEVTDLQQTPCQMAKCQNGAPC NDKLGTAICQCPPGFEGQSCEKLVSVNFVDRDSYVELQDVKNWPQSNITLQVSTAEDNGI LLYNGDHEPIAVELHRGHVRVTYDPGNQPATAIYSSETVNDGNFHTVELVTFNQMVNLSV DGGEPTTLDSQGRGQPLTRETPLYVGGMPEEVIPTSRGLSSQSLNTSSFHGCIKNLYINH ELQDFTRSQMKPGVVPGCQPCRKLYCLHGICQPNSAQGPQCHCQPGWTGQHCDQPITVGL SGGDVVTMANGINPCEGNKCVRGACLVLDAQTYRCECEKGFRGALCNLQEEPSGPCQRLQ CLHGRCQKTEDGESCVCEQGYTGESCDTETPCRGEPVRDYHRLQRGSVLCQTSKPFSWVD CRGHCRAEAEREAAAVSCCAPLRVRRRRITFECDDGTSFTQDVEKPVECGCKECV NT seq 4668 nt NT seq  +upstreamnt  +downstreamnt atgccagcgaggagaagaaaggatggagccgggtcggcggcgggtctgtggacgatgctg gcgtgggcggtcctggcgggtccgggaggcgctgaagggtgtccggctccctgcagctgc ctggggaacacggtggactgccacggccggggaatccactctgtccccaaaaacattccc agaggaactgagaggctcgatttgaacgagaacaacctgacggtcataaccaagacagat ttctctggtcttaaacacctcagagttctccacctgatggagaacaagatcagtagcatt gaaagaggagcctttgatgagctgaaggagctggaaagactgcgtcttaacagaaatcgt ctcagccagcttccagagctgctctttcagaagaacgaagctctgtctcgactggatttg agtgaaaatgccatccaggccatcccaaggcgagccttcagaggagccacagacatcaaa aaccttcagctggataaaaaccacatcacctgtattgaggagggagcgttcagagctctg agatccttggaagtgctcacactgaacaacaacaacatcagcagcattccagtctccagt ttcaaccacatgcccaaactgcgaacctttcgcctccactccaacgctctgcgctgtgat tgtcacctggcctggctgtcgccatggctacggcagcggtctgcgctgggcctctacacg cagtgcagttcccctccggctctgcgggggctcaacctcgcagagctgcgcaagagtgac ttcgcctgctcaggccacagcggcagcgccttcgttcagccgtgcagtttggcgtccggt tcttgtcctccgatgtgttcctgtagcaacaacattgtgaactgcagaggacggggcctc accgccataccagcgcacctgccggaggccatgacagagattcgtctggagcagaatggc atcaagtcggttcctcctggtgcgttcagctcctacaagaagctccatcgcatagacctg agcaacaatcagatatctgagattgctcctgatgcatttcacggcctccgagcgctcaat tcgcttgttttgtatgggaataaaataactgagctgcccagcggagtatttgatggcttg gtttctctggagctgctattgctgaatgcaaataaaatccactgtatccgtgccgcagcg ttcaaagacctggaaaacctggctcttctttctctgtacgacaataagatccaaagtctg gctatgggaacctttagctcactgcacagcatccagacactccacctggcccagaacccg tttgtttgtgactgtcatgtgaagtggctggcggacttcctgggttcaaaccccatcgag accagcggagctcgctgcgccagtcctcgtcggctcgccaacaaacgcatcgctcagatc aagagccacaagttcagatgctccgccaaggagcagtaccacatcccaggcactgaagac cgacgtctgagctatgaatgtaacagtaagcctgtatgtcctgctaaatgtcgctgtgag gccaatgtggtggactgctccaatctgcgcctcaccaagttcccagagcacctgccgccc tcgaccgaagagctgcgtctgaacaacaatgacctgtccatggtagaggccaccggcacc ttcaagggtctttctcatctaaagaaaattaacctgagcaacaacaagattttagagatc gaggacggtgcattcgagggcgcctcatcagtgggggaacttcacctcacagccaaccac ctagagtctgtgcgagggagcatgtttaaaggcatggaggctctgcgcatgctgatgctg aggaacaacaggatcagctgcatccataacagcagcttcacagggctgaccaacgtcagg ctgctctccctctacgacaaccagctcaccaccatcctgcctggagccttcgacactctg cccaacctctccactctaaacctgctggccaaccccttcaactgcgactgccacctgtcc tggttcggggcgtggctccgcagccgccggatcgtgacggggaaccctcggtgccagagc ccggcttttctgcgaggcattcctctgcaggacgtagcggtccctgatttccgctgcgag gatggttctgtgctggaggacaggagctgcgtagcggggcctcagtgtcccagtcagtgt tcctgtatggacacagtggttcgctgcagcaacaaacacctgcaggctctgcccagggga ttaccacgtaacatcaccgaactgtacctggatggaaaccagttcaccagcgttcccaaa gagttagccaccttcaagtacctgcagcttgtagatctgagcaacaataaaatcaactcg ctgtccaatgactccttctccaatatgagccaactcacgactctgatcctcagctacaac tcgttacgatgtatccctcctctagctctggccggcctgcattccctaagactgctctct ctccatggcaacgacatctctgagctgcagcagggaatcttcagtgacctggcctccctg tctcacctagcaattggagccaaccctctgtactgtgactgccggctgctctggctgtca gactgggtgaagagcggctataaggagccgggcatcgcgcgctgcgccggcccccagggc ctggagggcaagctgctgctcaccacacctgctgacaagttccagtgtctgggtccagtg gacatttctgttcaggccaaatgcactccatgcgttacctccccttgccagaaccaggga acctgccaaatccaccaaacccagcagtacacctgcgcctgcaagtcgggttttacgggt aaacactgcgagactccaatcgatgcttgtgtcagcaacccctgcacttatggaggaagc tgcctgagagacgagcagacaggaggcttcagctgcgcatgtgcattcggtttccatggt acattttgcgaggtcaacgtggatgactgcgaggatcacggatgtgataatggcgccacc tgtgtcgatggagttggcaactacacctgcttgtgtcctcctaactacagaggtctgctt tgtgaagaggaggatgatgtttgttctccaggtagaaatccttgtcagcatcagtccacc tgcatcagcagtcctacaggccccaggtgtgtgtgtatccctggctgggtgggaccagac tgcggcatcgactacaacgagtgcgcagatcaccgctgtcagaactcagctcagtgcgtc gaccatctggacggttacagctgcgtctgcctgccgggattcagtggtgagttttgtgag gtgacagatcttcagcagacaccctgccagatggccaagtgtcagaatggcgctccctgt aacgacaagttggggactgcaatctgtcagtgtccgcccggctttgagggccagagttgc gagaagctggtcagcgtcaacttcgtggacagagattcttacgtcgaacttcaggatgtg aaaaactggcctcagtccaacatcacattgcaggtgtcaactgcggaagataatggcatc ttgctgtataacggtgatcatgagccgattgctgtagagctccatcggggtcacgtaaga gtcacctatgatcctgggaaccaacctgccaccgctatttacagctctgagacggtaaac gatggtaatttccacacggttgagctggtgacctttaatcaaatggtgaacctgtctgtg gatggaggagagccaacgactctggacagccaaggccgcggccagccactgactagagag acgcctctttacgtgggaggtatgcctgaggaggttataccgacttctcgaggcctctcc tctcagagcctcaacacgtccagtttccacggctgcatcaagaacctctacataaaccat gagctgcaggactttacccgcagccaaatgaagccaggggttgttccgggctgccaaccc tgtcgcaaactttactgcctgcatggcatatgccaacccaacagtgcacaggggccccag tgccactgccagccaggttggacaggtcaacactgtgaccagccaatcactgtaggcctt agtggaggggatgtcgtcaccatggcgaatggtatcaacccatgtgagggaaacaagtgt gtgaggggcgcctgcttggtgctggatgctcaaacctaccgctgcgaatgtgagaaggga ttcagaggagcgctgtgtaacctccaggaggagccctccggcccgtgccagaggctgcag tgtcttcacggccggtgtcaaaagacagaggatggagagagctgtgtgtgcgagcaggga tacactggagagagctgcgatacagagaccccatgtcgaggtgagccggtcagagactac caccggctgcagcgcggctccgttctctgccagacatcaaaaccgttctcctgggtcgac tgtcggggtcactgccgggctgaagccgaacgggaagccgctgccgtttcctgctgcgct cctctgagggtccggcggcggcggatcaccttcgaatgcgacgatgggacatcgtttacg caggatgtggaaaagcctgtggaatgtggctgcaaggaatgtgtgtaa

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