Gambusia affinis (western mosquitofish): 122830571
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Entry
122830571 CDS
T07758
Symbol
setdb1b
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf00310
Lysine degradation
gaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122830571 (setdb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122830571 (setdb1b)
Enzymes [BR:
gaf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
122830571 (setdb1b)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
122830571 (setdb1b)
Heterochromatin formation proteins
Other heterochromatin formation proteins
122830571 (setdb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_4
DUF5604
Tudor_5
SET
MBD
Pre-SET
Motif
Other DBs
NCBI-GeneID:
122830571
NCBI-ProteinID:
XP_043971927
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All DBs
Position
LG05:complement(20226024..20243120)
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AA seq
1262 aa
AA seq
DB search
MESGDGMEVDGWDPSLEDELGVSLDDLKKWIEEAVEQSEAVKKKKAQLIELEEWVEQKEK
EEAKTEKLLNDANQSVLECEKLVRAAYENNGLVYQESSSEDEGGGGGGGPPSEVIEIDDD
DDDDVIAVGCLVPPKTQTPSKDPTLNEASAVLQKTTQQVQKLVQIVTKPSSGSPLIRTAV
QSVVQPGVQSPTPAIFVSQAPSHQTMTQTQPNPNIKEDELKVGMNILGKKRTKTWHKGNL
VAINPVGNGVFKYKVRFDKGKSLLSGNHVAFDYNPTLESLYVGARVVAKYKDGNLVWLYA
GIVAEMPNNKNRMRFLIFFDDGYASYVILPELYPVCRPLKRTWEDIEDASCRDFIEEYIS
AYPSRPMVLLKVGQIIKTEWEGTWWKSKVEEVDSSLVKILFLKDDKRSEWIYRGSTRLEP
MFNLKLASANTQEKKLAGHQRTRPNMGALRSKGPVVQYTGVEHVGVSPAKPPQPTQSQPP
ATTLIQQLQQRPQPQLIQQVQPSQQTQQTQQTQQLQIQQTQQTPQPSLAAQLQRIENKHQ
MAKKSTSNFIPGVGGTHASKILQAASANASNLSVGKVQSTPSTPTSTFAPLYQRQTSALV
SPPTIVTHAMATIPQQPSYRAPTDRIFYLAHTCQPACLNRVRPAKSDLHRGKNPLLTPLL
YDFRRMTGRRKVNRKMSFHVIYKAPCGLCLRNMGEIQNYLFQTRCDFIFLEMFCLDPYVL
VDRPFQPQRPFYYIPDITSGKEDIPLSCVNEIDTTPPPNVKYSKERIPEDGVFINTSSDF
LVGCECTDGCKDKSKCSCHQLTLQASGCTPGGQINQSAGYSYKRLEECLPTGIYECNKRC
KCCAQMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKE
GLEMGDEYFANLDHIESVENFKEGYESEAHCSDSEGSGVDVSRMKIQPSALVSSSAARKK
AQSSSSSDDSNDEEEKDSKSEDESDSSDDTFVKDNYYTPSSVWRSYTTRGQAKGNKEGSQ
DSKDGLSVSAKGQDDEKPPSMPEETGKSKVASWLTSQGLKKETGDKSQIKTEQSKKQDVM
TLSDSDDVQTISSGSEDNKEREKATPASVSGVTKKQVAVKSTRGFALKNSHSLMVKPSGG
GVGPSAQGSKPGHQGQPGGGAENAPRTTRLFFDGEESCYIIDAKLEGNLGRYLNHSCSPN
LFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGSTECRGR
LL
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcggtgatggaatggaggtcgacggctgggaccccagtctggaggacgagttg
ggagtttcgctggatgacctgaagaaatggattgaggaggctgtggagcagagcgaggct
gtgaagaagaaaaaagcccagctgatagagctcgaggaatgggtggaacagaaagagaaa
gaagaggcgaagacagagaaacttctcaatgatgcaaaccagtccgtattggagtgtgag
aagctggtgagggcagcgtatgaaaacaacggcctcgtctaccaagagagcagctcagag
gatgaaggaggcggcggaggaggagggcccccctctgaagtcatcgagattgatgatgat
gacgacgatgacgtcatagctgtaggatgtttggttcctccaaagacacaaacgccatct
aaggacccaacattaaatgaagcctctgcagttctgcagaaaaccacccagcaggtccag
aagttggtccaaatagtcaccaagccttcctctggttctcctttgatacgaacagcagtg
caatctgtagttcagccaggagttcagagcccgacaccagcaatatttgtatcacaagct
ccgtctcatcagacgatgacgcagacgcagccaaaccccaacataaaagaagacgagctc
aaagtggggatgaacatcctgggaaagaaacgcaccaagacatggcataaaggcaacctg
gtggcaattaaccctgttggaaatggtgtatttaagtacaaggtgagatttgataaaggc
aagagtctgctgtctggaaatcatgtggcgtttgactacaaccccaccctggagagcctg
tatgtcggggctcgtgttgtcgccaagtacaaagacggaaacctggtgtggctgtacgct
ggaatcgtagcagagatgccgaacaacaagaaccgcatgaggtttctgatcttctttgac
gacggctacgcttcatatgtgatccttcctgaactgtatccagtttgcagaccattaaag
cgaacttgggaagacatagaggatgcatcttgtcgggacttcatcgaggagtacatctcc
gcctatcccagcaggccgatggtgctcctaaaggtcggccagataatcaagacagagtgg
gaagggacctggtggaagagcaaagtggaggaggtggacagcagcttggtcaaaatcctc
tttctgaaggacgataagaggagcgaatggatttacagaggatccaccaggttggagccc
atgttcaatctgaaactggcttcagcaaacacacaagaaaagaagctagctggccaccag
aggacaaggccaaacatgggagcattaaggagtaaaggcccagtcgttcagtacactggc
gttgaacacgtcggagtttctcctgccaaacctcctcaaccgacacagagtcagccgcca
gcgacgacactgatccagcagcttcagcagcgcccgcagccccagctcatccagcaggtc
cagccatcccagcaaacccagcaaacccagcaaacccagcagctacaaattcaacaaacc
cagcaaacccctcagccctcactggctgcccagcttcaacgcattgaaaataaacatcag
atggcaaagaagagcacgtctaatttcatccctggtgtcggcgggacgcatgcctccaag
atcttgcaagctgcgtccgctaatgccagcaacctctcagttggaaaagtgcagagcacc
ccaagtacacccacgtccaccttcgcgcctctgtatcagaggcagacgtccgccctggtg
tctcctcctaccatcgtcacgcatgcgatggccaccatccctcagcagccgtcctacaga
gccccgacggaccgcatcttctacctggctcacacctgtcagcctgcgtgtctgaaccgt
gttcgaccagcaaaatcagacctgcacagaggaaagaaccccctcctcaccccgctgctc
tacgatttcagacgcatgacgggacgacgcaaagtcaaccgtaaaatgtccttccatgtt
atctacaaggctccgtgcggactttgcctacgtaacatgggggagatccagaactacctc
ttccagacccgctgtgactttatattcttagagatgttctgtctcgacccgtatgtcttg
gtggaccggcctttccagcctcaaaggcccttctattacattccagacatcactagtggg
aaggaggacatccctctgtcctgcgtcaatgagattgataccactccaccacctaatgta
aaatacagcaaggagcgaatccctgaagacggagtatttattaacaccagttcagacttc
ctggtcggctgtgaatgtaccgacggctgtaaagacaaatccaaatgttcctgccaccag
ctgaccctgcaggcttccggctgcacacctgggggacagatcaaccagagcgctggatat
tcatacaagcgattagaggagtgcttacctacagggatttatgagtgcaacaaaaggtgt
aaatgttgtgctcagatgtgcaccaaccggctggtgcagcacggcctgcaggtccgtctg
cagctctttaagacccagaacaaaggctggggcattcgctgtctggatgatatagctaag
ggatcatttgtgtgcatttatgctggtaaaatcctgactgatgatttcgctgacaaagaa
ggtctagagatgggtgacgagtatttcgctaacctggaccacatcgagagcgtggagaac
ttcaaggaaggctacgagagcgaggcgcactgctccgacagcgagggcagcggcgtggac
gtgtccaggatgaaaatccagccgtccgctttagtctccagcagcgctgccaggaagaaa
gctcagagctccagctcttcagatgacagcaatgacgaagaggagaaagattcaaagagt
gaggatgaaagcgacagctcagacgacacgtttgtgaaggacaactactacacccccagc
tctgtgtggaggagttacacgactcgtggtcaggccaagggcaacaaagaagggagtcag
gacagtaaagatggactgagtgtctcagccaaaggtcaggatgatgagaaaccgccctct
atgccagaagagacggggaaaagcaaagtggcttcctggttaacaagccagggtctgaag
aaggaaactggagacaagagtcaaataaagacagagcaatcaaagaaacaggatgtcatg
actctatcggacagcgacgatgttcaaaccattagctccggatctgaagacaacaaagag
cgagagaaagccactccggcttctgtatctggcgtgaccaagaagcaggtggcggtgaaa
tccacgcgaggcttcgccctgaagaacagccacagtttgatggtgaaaccgtctggggga
ggagtcgggcccagcgctcaggggagcaaaccgggccaccaggggcagcctggaggaggg
gcagaaaacgctcccagaaccacacggctgttcttcgacggcgaagagtcctgctacatc
atcgatgccaagttggagggaaatttgggacgttacctcaatcacagctgcagtcctaac
ctgttcgtccagaacgtgtttgtcgacacacacgacttgagattcccctgggtggcgttc
ttcgccagcaagcgcatccgggccgggacagaactgacctgggattataactacgaggtg
ggaagcgttgaaggcaaagagctgctgtgctgctgcggatccacagagtgccgtggacgg
ctgctgtga
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