Gambusia affinis (western mosquitofish): 122832330
Help
Entry
122832330 CDS
T07758
Symbol
mmp13b
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gaf01002
]
122832330 (mmp13b)
Peptidases and inhibitors [BR:
gaf01002
]
Metallo peptidases
Family M10
122832330 (mmp13b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
DUF4953
Peptidase_M66
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
122832330
NCBI-ProteinID:
XP_043974899
LinkDB
All DBs
Position
LG06:complement(13139473..13143184)
Genome browser
AA seq
488 aa
AA seq
DB search
MIPVACLGNSVSTMFPLLVLVLLLPVLAQYSFALPLPTGKKENLATDKVRIDDLLIAEKY
LRHFYGLPIGLQDRQSPSKDFKNKVQQMQRFFKLQVTGNLDDNTLEVMKLPRCGVPDVGE
YNHFPRDLKWENKNVTFRIVNYTPDLKQSDVDRAIRNALNVWADVTPLTFKKIYDGNADI
MISFGTREHGDHNPFDGPDGLLAHAYPPGSGIGGDTHFDEDEHWTKDSSAYNLFYVAAHE
LGHALGMSHSSDAGALMYPVYSFASGFPLAEDDIEGIQALYGPNPNPRKRKPKPDAPNKC
DPELSFDAVTELRGETIIFKDRFYWRLHPQMAEPEQTLIKSTWPSLPKKVDAAYEYPEKD
LVFIFSGIRMWALNGYSLVDGYPKYIHKLGLPKSVRKIDAAVHIKNTGKTLLFVDEEYWS
YDEATGTMDPGFPKSVEDDFPGMHDEFDAVTFHQGYLYFFRENMQYEYSYRFRKVIRIMR
TNSFLNCM
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgatcccagtggcttgtttgggtaactcggtgtcaacaatgtttcctttgctggttctg
gtgctgctgctgccagtgttggctcaatattcctttgctctgcctctgcctactgggaag
aaagaaaaccttgctacagataaggtcaggatagacgatctcttaatagctgagaaatac
cttcgtcacttctatggtcttccaattggtctccaagatagacaatcgccatcaaaggat
tttaaaaacaaggtccagcaaatgcaaagatttttcaagcttcaggtaactggaaatctt
gatgacaacaccctggaggtcatgaagctgcccagatgtggtgtaccagatgttggggag
tacaaccacttcccgcgagacctcaaatgggaaaacaagaatgtcacattcagaattgtg
aattatactcccgatctgaagcaatctgatgtggacagagcaatccgaaatgcgctgaat
gtttgggcggatgtcacccctttgaccttcaagaagatatatgacggcaatgcagacatt
atgatcagctttggaacaagagagcatggtgaccacaatccatttgacggacctgatggg
ctgctggctcatgcctaccctccaggctcaggcattggaggagacactcactttgatgag
gatgaacattggaccaaagattcatcagcgtacaatctgttttatgtagcagcccatgag
ttaggtcatgcacttggtatgtcccattcatcggacgcaggtgccctgatgtacccggtc
tactcgttcgcctctggcttcccactggctgaagatgacattgaaggcattcaggctctc
tatggtcccaaccccaatcctagaaaaaggaagccaaaacccgatgcacctaacaaatgt
gatcctgagttgagttttgatgctgtaacagaattacgaggagaaaccatcattttcaaa
gacaggttctactggcgtctccatccacagatggcagaacctgagcagacactgatcaag
tccacatggccctccctgccaaaaaaagtggatgcagcgtatgagtacccagagaaggat
ttagtcttcatatttagtgggatccgtatgtgggccttgaatggatattcacttgtggat
ggctatccaaagtacatacataaacttggtcttcccaaatcagttagaaagatagatgca
gctgtgcatataaaaaacactgggaaaactctgctttttgtcgatgaagaatactggagt
tacgatgaagcaacaggcaccatggaccctggctttccgaaatctgttgaggatgacttt
ccaggaatgcatgacgagtttgatgctgtcacttttcatcagggctacttgtatttcttc
cgtgaaaatatgcagtatgagtacagctacagattcaggaaggtgatccgcattatgagg
accaactccttcctcaactgtatgtaa
DBGET
integrated database retrieval system
