Gambusia affinis (western mosquitofish): 122832699
Help
Entry
122832699 CDS
T07758
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1-like isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04530
Tight junction
gaf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
122832699
09142 Cell motility
04810 Regulation of actin cytoskeleton
122832699
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
122832699
Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
122832699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PH_10
PDZ_6
PDZ_2
InhA-like_MAM
Motif
Other DBs
NCBI-GeneID:
122832699
NCBI-ProteinID:
XP_043975641
LinkDB
All DBs
Position
LG06:complement(7815618..7862966)
Genome browser
AA seq
1598 aa
AA seq
DB search
MGNTESQNGEHALYSTGRGYLSRKHMSRSLRISNKQSRRSRHPSSGKMEHRNSETSTRSS
STPSIPQSLADNGLEPFNETNNFPDFGSPIWVDRVAMSLRPISFHNDLANPSVHMNTMHI
TLPGPTAEETQDEEVYTNEVKYIQQTLECSKETISFKKRSKSADTWRDDSLEFSLSDVSQ
DNLTSTEEIIDMANERDFPDCEGHMQFSPTDSADRANSLDELYSDTSPASRTHGRYAKWH
DTNRSVGEGEDGKRLSPSEEDGTSYGAYTLPCRRSHCLSEGLSNLQATMCKSMQGRRAQT
IQDVTAGDGSEYEDSGIDGVMVDAVHQPRRYKTMSASFSVCSMHGRNVFVGSDSGSSSGG
GGASEGVQGVYENFRQELQMSSCQTESLEEAGSALSDEQSTMSSAYQSDLLLSVVQGMVR
KAGKLAVKNFLVHKKNKKVESATRRKWKTYWVSLKGCTLFFYETDGRSGIDNNSIPKHAI
WVENSIVQAVPEHPKKDFVFCLSNSLGDAYLFQTCSQTELENWITAIHSACATAVARQHH
REDTVRLLRAEIKKLEQKIDMDEKMKKMGEMQLSAVTDTKKRKTILDQIFLWEQNLEQFH
MDLFRFRCYLASLQGGELPNPKRLLAFASRPTKLTMGRLGIFSVSSFHALVAARTETGVR
RRTQAMSHSCSKRKSRFSSLWGVDTTSKKKTKAHPTVSQVFADGEEPEKKPVDRIFVDSV
KENTKTEDGTVKNLARPNTDSDMWVPENLTPSWVCLPNDQPVLTTIQPGESALCVLESIC
KTHELDPTKHYLRLKFFMENQTQFYIPKPEEDIYDLLYKEIELCSKITKVIQFDRDESCM
IGYGFSISVVEEDGVQQLYITDVKAGGLAFAKGLNAGDEILQLNGKDSHSLNFSDMKAAF
SQVSLALTVNTLPSVDRRQLCYLPPRRSDAAEDLYTDIFSQSQEEILDDGVGLLLESSGD
SLDDDSEIFSEFDECGKSTEQVAAFCRSLHDMNPSECVSSSPSPDSPFPPTATPRQLSDA
DKLRKVICELVETERTYVKDLNCLIWRFLTPLQKENFLTQDELDVLFGNLPEMVEFQVEF
LKTLEDGTRLVPDLEKLESVDQFKKILFSLGGSFLYYADRFKIYSAFCASHTKVPKVLVK
AKTDPNFKAFLDERNPKQQHSSTLESYLIKPIQRVLKYPLLLRELYSLTDPDSEEHYHLD
VAIKAMNKVASHINEMQKIHEEFGAVFDQLITEQSSEKKDVADLSMGDLLLHNTVTWINP
PISLGKWKKEPQMATFVFKTAVVFVCKEESKQKKKIGGSHRVSVSSEEKDPFRFRHMIPT
DALQIRSMSNTDGESSAMCEIVHTKSESEGRPERTFHLCCSSPESRKEFLKTVHSILREK
HRRQLLKTESLPLNQQYVPFGGKRLCALKGARPAINRAASAPTRTLGRRKLVRNRFTIDT
DIVFDGDSEQQDLTSPQESDSVPLQQKEQQQQQSELAGDTDRWVEEQFDLEEYEDEEEMK
ETDILSDDDDEFCQTPRALSKETDLESPLMALSLEGAETDGSKSLLSPTVSDTPDEEKIS
DTERKSSVTDNSEDKNQAEKAEVWVRREPSDSSPECPT
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atggggaacactgagagccaaaacggggaacatgccctctacagtactggacgtggctat
ttgtcacggaagcacatgtctcggtctctacgcatttccaacaaacagtcaaggcgttct
cggcatccttcgtcgggaaaaatggagcacagaaactctgagacgagcactcggtcaagt
agcacccccagcatcccacagtccctagctgacaatggtttggaacccttcaatgaaaca
aacaacttccctgactttggaagccccatttgggtggatcgtgtggcaatgagtttacgc
cctatatcatttcataatgatctggccaatccctcagtgcatatgaatacaatgcacata
accctacctggtcccactgcggaagagacgcaggatgaggaagtgtacacaaatgaggtt
aaatatattcagcagactttagagtgctccaaagagacaatcagcttcaaaaagagatcg
aaatctgcagacacctggcgagatgacagcctagaattttccctgtctgatgtcagtcaa
gataacttaaccagcaccgaggagatcatcgacatggctaatgagagagacttccctgac
tgtgaaggccacatgcagttcagcccaacagactctgccgacagagcaaactcactggat
gaactgtacagcgacaccagcccagcctccagaacccatggccgctatgccaagtggcat
gacaccaacagatctgtgggagagggagaggacggtaagaggctgtcaccatcagaggag
gatgggacttcatacggcgcatacactcttccctgccgacgttcccactgcctctctgaa
ggcctgagcaacctccaagccacaatgtgcaagagtatgcagggccggcgagcacagacc
atacaggatgtcacggccggagacggcagtgaatatgaagacagcgggatcgacggggtg
atggttgatgcagtgcaccaacctcgacgctacaagacgatgtcggcgtccttctccgtc
tgttccatgcacgggcggaacgtgtttgttggcagtgacagcggcagcagcagtggcggc
ggtggcgccagcgagggtgtgcagggtgtgtacgagaacttccgtcaagaactacaaatg
agttcctgccagacggagagcttggaggaagcgggctccgcccttagcgatgagcagagc
accatgagctccgcctaccagtctgatctgttgctaagcgtcgtccaggggatggtccgt
aaagccggcaaacttgctgtaaagaacttccttgtgcacaaaaagaacaagaaagttgag
tctgccacaagacgcaagtggaagacttactgggtttccctaaaaggatgcactctcttc
ttttatgaaactgatggccggtcagggattgacaacaacagtattcccaagcatgccata
tgggtggagaacagtattgtccaggctgtgcctgagcaccccaaaaaggactttgtgttc
tgcctcagcaattccttgggggatgcataccttttccagacttgcagccagacagagcta
gaaaactggatcaccgccatccactcagcatgcgccaccgccgtcgctcgccagcatcac
agagaggacaccgttaggctgctgcgggctgagatcaagaagctggagcagaagatcgac
atggatgaaaagatgaaaaagatgggagagatgcaactgtctgctgtcactgacaccaag
aagaggaagacaatcctggatcaaatcttcttgtgggagcagaacctggagcagttccac
atggatctgtttcgctttcggtgctacctggccagcttgcaaggtggagagttgcccaac
cctaaacgcctcctggcctttgcctcccgccccaccaagctgaccatgggcagattggga
atattctcagtctcttccttccatgcactggtggcagctcgcacagaaactggagtgaga
cgcagaacgcaagccatgtctcattcctgcagcaagcgcaaaagcaggttttcctccctc
tggggtgtagacacaacctcaaagaagaaaacaaaagcccaccctacggttagccaggtg
tttgctgatggtgaagagccagagaaaaaaccagtagatcgcatatttgttgattctgtg
aaagaaaacacaaaaacagaagacggaactgtgaaaaaccttgctcgaccaaacactgat
agcgacatgtgggttcctgaaaacctcactccctcctgggtttgtctgccaaatgaccag
cctgtgttaaccaccatccagccaggagagtctgcactgtgtgttctggagtctatatgc
aagacccatgagcttgacccaaccaaacactacttgagacttaagttctttatggaaaac
caaacgcaattctacattcccaagccagaagaggacatctatgacttgctgtacaaagaa
atcgaactctgctccaaaataactaaagtaatccagtttgacagagatgaatcctgtatg
attggttatggtttttctatctcagtggtggaagaagatggagtacagcagctttacatc
actgatgtgaaggctgggggcttagcctttgccaaaggtctgaatgccggagatgaaatt
ctccagctgaatgggaaagactcccacagtctcaatttctcagacatgaaggctgcattc
tcccaagtgtctctggctttgacggtcaacactctgccctcagtggaccgccgtcagctt
tgctaccttccaccacggcgctctgatgcggcagaagacctctacactgacatcttctcc
caaagtcaagaggagattctggacgatggtgtgggactgctgcttgagagctctggagac
agcctggatgatgactcggagatctttagcgaatttgatgaatgcggaaagagtacagag
caggtcgccgctttctgtcgcagtctccatgacatgaatccctcagagtgcgtgtcctct
tcgccgagcccggactcgcccttcccgcctaccgcaactccccgacagctgtctgatgcc
gacaagctccgcaaagtgatctgtgaactcgtggagaccgagcgcacctatgtcaaagat
ctcaactgtctcatttggagatttttaaccccactgcagaaagagaatttcctcacacag
gatgagctggatgttctatttggcaatttgccagaaatggtggaattccaggttgagttc
ctaaaaacgctggaagatggaaccagattggttccagatctggagaagctggagagtgtg
gatcagtttaagaaaatactcttttctttgggaggctctttcttgtactatgcggaccgt
tttaagatctacagtgctttttgtgccagtcacaccaaggtcccaaaggttcttgtgaag
gccaaaaccgaccctaatttcaaggcctttcttgatgagcggaaccccaagcagcagcac
tcctccaccctagaatcctatttgattaaacccattcagagggtgctaaaataccccctt
ctgctaagggagctctactcactgacagacccagacagtgaggaacactaccacttggat
gttgctataaaggccatgaacaaggttgccagccacatcaatgaaatgcagaagatccac
gaggagtttggagcagtgtttgaccagctgatcactgagcaaagcagtgaaaagaaagac
gtggctgatttatcgatgggtgatttgctgcttcacaacacagtgacatggatcaacccg
cctatttctctgggaaaatggaagaaagaaccacagatggcaacatttgttttcaaaact
gctgtggtttttgtatgcaaagaagagtccaagcagaagaagaaaattggtggctcacat
cgagtttctgtatcttcggaagaaaaagatcctttccgattccgtcacatgattcctaca
gatgcccttcaaatcagatccatgtcaaacacagatggtgagagttctgccatgtgtgaa
atagttcacacaaaatcagagtcagaaggaagaccagagaggacgtttcacctgtgctgc
agctctccggagagcagaaaggaatttctgaagacagtccactccatcttgagggaaaag
caccgccgacagctcctaaaaacagagagtttacccctcaaccagcagtatgtgccattt
ggaggaaaacgactctgtgctctgaaaggagcccggccagccataaatagagctgcatct
gccccaaccaggacgctaggcaggagaaagctggtgcgcaatcgtttcaccatagacacc
gacattgtttttgatggggactcggaacagcaggatctcacttcaccacaggaatctgat
tcagttccgctgcagcagaaggagcagcagcagcagcagtctgagttagcgggagacaca
gaccgctgggtggaggagcagtttgacctagaagagtatgaagacgaagaagaaatgaag
gagacagacatcctaagcgatgatgacgacgagttttgccaaacaccgagagctctatct
aaagagactgatctggagagtcccctgatggctttatccctggagggtgcggaaacagat
gggagtaagagcctgctgtctccaactgtgagcgacacaccagatgaagagaagatatcc
gacacagagaggaagagctctgtaactgacaactctgaggataagaatcaagcagagaag
gctgaggtttgggttcgaagggaaccatcagattcatctccagaatgccccacataa
DBGET
integrated database retrieval system
