Gambusia affinis (western mosquitofish): 122833479
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Entry
122833479 CDS
T07758
Symbol
pkp1b
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122833479 (pkp1b)
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
122833479 (pkp1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
Atx10homo_assoc
HEAT_EZ
HEAT
Motif
Other DBs
NCBI-GeneID:
122833479
NCBI-ProteinID:
XP_043976992
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All DBs
Position
LG07:complement(26152062..26162789)
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AA seq
730 aa
AA seq
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MSSEDPLKSAISIRSSDDTSLALPSANEYHSREQRVKAQVQSIRRTKSRHSSSGRSGSTS
LSPTSLEYDSVFLDGAKSQLSSSNGSGFLSNGSSKVFTTNRNMNNQHMISNMKRSTVRKQ
TINHYENRYGAVGGAASLGLANTSRSEPALALNYSVPQPAIPMQSTIQQRGNRNTYVKHG
SSSNHYIKRTISQTHPLYPLNGSGLMHKQSQYRVCQPEMNKTQSQQTVTDSSSKTQINSE
VNGNSVSSSITMQEAVQFLFSQDEKYQNCGASYIQHNTFISDKAKEEVLTLNGIPPLVSL
LQSPNSQVKSTASAALRNLTFQNNKNKAEIQRCDGIPVVIAQLKDSRSAELDKQLTGLLW
NLSSVDNLKSDLLKNALPVLTERVIQPYTTGSRDTVSADVFLHTTACLRNLSSANVASRQ
TMRKSRGLIDGLTAYVKECVANSKTEDETLEHCVSILHNLTFHLEEEFSSLFINMNTLAK
NMTSNVSQNNANSVGCFSAQSKPLQTDRPFDYAVIEDPEPKGAGLLIHSKMLKDYLSLLC
LTERQSLQDACWGILHNLTARESTVSYVISHIIVKKLNGMQYISPFLKSDKVNMQKNAMG
LVVNLIKNPNLCSVVGEKAIPDLLSVLSKDTAGANESDDTLALACQAAGGLVLNNVEWTK
RHLSEKLIKSLNSISRNIYFSKSSKAASVLLLRMWSNKELQSSLKKLGFSKSMFVNDTTM
AVQKSLQVVD
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtgaggatcctctgaaatcggcgatttccatcaggagctcggacgacacgtcg
ctggctctgccgtcggcgaatgagtatcattcccgggagcagcgcgtcaaagcgcaagtg
caatctatcaggaggacgaagtccaggcactccagcagcggcaggagcggatctacttct
ctttccccaacaagccttgagtacgactctgtgtttttagatggcgcaaagtctcagctg
agttcatctaatggaagtggttttttgagcaatggctcctcaaaagtttttaccacaaac
agaaatatgaataaccaacacatgatcagtaacatgaaaagatccaccgtgaggaagcag
actataaatcactatgagaacagatatggcgctgttggcggtgcagccagtctgggtctt
gctaacaccagtcgcagcgagcccgcgctggccttgaactacagcgtcccacagccggcc
atcccaatgcaatcaaccatacaacaacggggcaacaggaacacctacgtgaaacacggc
agcagcagcaatcactatataaagaggaccatctcccaaacccaccctctgtatccttta
aatggatcgggtctgatgcacaagcaaagccagtacagagtctgccagcctgaaatgaac
aagacgcagtcacaacagaccgtcactgattcttcatccaagactcagataaactcagaa
gtaaatggaaacagtgtgagttctagcatcactatgcaagaagcagtgcagtttcttttc
agccaagatgagaaataccaaaactgtggtgcttcctacattcagcacaacactttcatt
agcgacaaagcaaaagaagaggttcttaccttgaatggtatcccgcccctcgtgagtctg
ctgcaaagccccaactcacaggtcaaaagcacggcctctgctgccctgcgaaatctgacc
tttcagaacaacaaaaacaaagcagagatccaacgctgcgatggcatacccgtggtgatt
gctcagctcaaagactcacgatctgcagaactagataaacagttgacaggtcttttgtgg
aatttgtcgtctgtagacaacctgaagtcagacctgctgaagaatgctctgcctgttcta
acggagcgtgtgattcagccttacacgacaggctctagagatactgtcagtgctgatgtc
ttcttgcacaccacagcatgccttcgaaacctcagcagtgcaaacgtggccagcagacag
acgatgaggaaatctcgaggtttgatcgacggcttaactgcttacgtaaaagaatgtgtg
gcaaacagtaaaacagaagatgagactttagaacactgtgtgagcattctgcacaatttg
acatttcacctggaagaagaattttcaagtctgttcatcaacatgaatactctggcgaag
aatatgaccagtaacgtcagtcaaaataacgccaactctgttggctgcttcagtgcacaa
agcaaacccctacaaactgatcgtccctttgactatgcagtcattgaggatccggagcct
aaaggagcaggccttttgatccactccaaaatgctgaaggattacttgtctctgctttgc
ttgaccgagcgccaatcgctgcaggatgcctgctggggcatactgcacaatctcactgcg
cgtgaaagcactgtctcttatgtaatcagtcatatcattgtgaagaaactgaatggcatg
cagtatatcagccccttcttaaagtcagataaagtcaacatgcagaagaacgcaatgggt
ttggtggtaaatttgatcaagaacccaaatctgtgcagtgtcgttggtgaaaaagccatc
ccagatctactaagcgtcctctcaaaagacacggctggagccaacgagtccgatgacact
cttgctttggcctgtcaggctgccggcggcctggttctgaataacgttgaatggaccaaa
agacatttaagcgaaaaactgattaaatccctgaacagcatcagccgaaacatttatttc
tccaaatcaagcaaagccgcttcagttcttctcctcagaatgtggtctaataaagaactt
cagagctctttgaaaaagcttgggttcagcaagtccatgtttgtcaatgataccaccatg
gcagtacaaaagtctctccaagttgtggattaa
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