Gambusia affinis (western mosquitofish): 122834210
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Entry
122834210 CDS
T07758
Symbol
iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122834210 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gaf01007
]
122834210 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gaf03016
]
122834210 (iars1)
Enzymes [BR:
gaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
122834210 (iars1)
Amino acid related enzymes [BR:
gaf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122834210 (iars1)
Transfer RNA biogenesis [BR:
gaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122834210 (iars1)
Prokaryotic type
Other AARSs
122834210 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Plectin_PPL
PriX
Motif
Other DBs
NCBI-GeneID:
122834210
NCBI-ProteinID:
XP_043978345
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All DBs
Position
LG07:complement(20471285..20517641)
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AA seq
1268 aa
AA seq
DB search
MVEPVPESISFPSEEEKIMQFWQDKNCFQECLKQSKNRPRYTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGITGPEDVAKMGIAEYNKQC
RSIVMRYSHEWESSVKRMGRWIDFKNDYKTLYPWFMESVWWVFKQLYEKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVIVSFPLVESENVSLIAWTTTPWTLPSNLALCVNP
EFLYVQVKDNTTERTYIMMEARLGALFKSESEYTILNKFPGKVLKGKKYKPLFLYFSKCA
ERGAFQVVTDNYVKEEEGTGVVHQAPYFGADDYRVCTEYNIIQRDQAPICPVDASGCFTS
EVTDFAGQYVKDADKNIIKLLKEKGRLLNASTFKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVDKLLDCNGKCYWVPEFVGEKRFGNWLRDARDWAISRNRYWGTPIPLWVSDDFEEVVC
VGSMAELEELTGIKVTDLHRETIDNLTIPSRCGKGVLRRITEVFDCWFESGSMPYAQVHY
PFENRKEFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPGLIVQNYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAY
RFLVQNVQRLQKEDEIQFLYNENTVKQSDNIMDKWIQSFTQSLIQFFKAEMDAYRLYTVV
PRLVKFVDMLTNWYVRTNRRRLKGESGTEDCLWALETLFSVLFSMCRLMAPFTPFITEMM
YQNLRHLIDPAAVEEKDSNSIHYLMLPQVRDNLIDKRIESAVSQMQSVIELGRVIRDRKT
LPVKYPLKEVVVIHQDPEALKDIQSLEKYILEELNVRQLTLSTDKNKYGIRLRAEPDHMV
LGKKLKGAFKAVTASIKELPSKQLEAFQKTGSIVVDGHELHEEDLRLMYTFDQTSGSAAQ
YEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKAHLVPSDEISVYYRCQPEGE
YLGSVIEAHTDFILATTKAPLLPFPVPKTASVIIEEKTQLKGSDLEFTIVKGSSLSQTPP
NGPACAYVNLRVKVNNKEQEGVVLLENPKGDNRLDLDKLKKVCSSIFGINNTPLRFFSDQ
SELTSRADLQAHSGKTLLVTSGPSSPGAVPTADTLLCPYVNLLLCNAQPAECQAGDVGTL
LLVNPVGQNELDHSGLLSEAAKVFGLRSRRLKLYLDQDLSNELPAESSVKSLHTKTLYVR
VFPTTAEA
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccagttcctgaatccatcagttttccctctgaggaggagaagatcatgcag
ttttggcaagacaagaactgtttccaggaatgcctcaaacagtccaagaaccgacccagg
tacaccttttacgatggccctcccttcgccacgggtctgccgcattatggtcacatctta
gctggcaccatcaaggacatagttacccgttttgcccaccagagtggcttccatgtggac
cggcgctttggttgggactgtcacggtctgcctgtggagtatgaaattgataaaactttg
gggatcacaggacctgaagatgtggccaagatgggcattgctgagtacaacaagcagtgc
cgaagtattgtcatgagatactctcatgaatgggagagctcagtgaaaagaatgggccgg
tggatcgacttcaagaatgactacaagactctttacccgtggttcatggagtcagtctgg
tgggtgtttaagcagctctatgaaaagggtctggtgtatcggggagttaaagtcatgcct
ttctccactgcctgcaacacacccctctccaactttgagtcccatcagaactacaaggat
gtccaggatccctctgtgattgtgagttttcctctggttgagagcgaaaacgtttctttg
atcgcttggacaaccacaccttggaccctgccgagtaacctggcgctctgtgtcaaccca
gagttcttgtatgtccaggtcaaagataataccacagaaaggacctacatcatgatggaa
gccagactgggagctcttttcaagtctgagagtgaatacacaattttgaacaaatttcca
ggcaaggtcctcaaaggaaaaaagtacaaaccactttttctctacttcagtaagtgtgcg
gagaggggagcattccaggtggtgacggataactacgtcaaggaggaagaaggcacagga
gttgtccaccaggccccttactttggagctgatgattacagggtgtgcactgaatacaac
atcatccagcgggaccaggctcctatctgccctgtggatgcctctggctgcttcacttca
gaggtcactgactttgcaggacagtatgtcaaagatgctgacaagaacatcattaaattg
ctgaaggaaaagggacgcctgctcaatgccagcacattcaaacatagctaccctttctgc
tggaggtctgacacccccctgatctacaaagctgtccccagctggtttgtgcgagtggag
cacatggtggacaaactgctggactgcaacgggaaatgctactgggtcccagagtttgtg
ggagagaagcgttttgggaactggctcagagatgcacgcgactgggcaatttcgagaaac
cgctactggggcacaccgatccctctgtgggtcagtgatgacttcgaggaggtggtctgt
gtagggtccatggctgaactggaggagctgactggaatcaaagttacagatttgcatcgg
gaaaccattgacaacctgacaatcccgtcacggtgcggtaaaggcgtcctgcggaggatt
acagaggtgtttgactgctggtttgagagtggcagcatgccgtacgcccaggttcactac
ccgttcgagaacaggaaggagtttgaggacaccttcccagcagacttcatcgcagagggc
attgaccagaccagaggatggttctacaccctactagtgctttccacagcgctgtttggg
aaaccacccttcaagaacgtcattgttaatggactcgtgctcgctagcgatgggcagaag
atgagcaagcgtaagaagaactacccagatccaggactgattgtgcagaactatggagct
gatgccctcaggctgtacctcatcaactcccctgtggtgagagcggagaacctgcgattc
aaagaggagggcgtgcgagacgtgctgaaggatgtcttcttgccgtggtacaacgcctat
cgcttcctggtgcaaaacgtacaaagattacaaaaggaagacgagattcagttcctgtac
aatgaaaacacagtgaagcagagtgataacatcatggacaagtggatccagtcgttcaca
cagtctctcatccaattctttaaagctgagatggatgcgtaccgcttgtacacggtggtc
cctcgcctggtcaagtttgtggacatgctcaccaactggtacgtcaggactaacaggcgc
cgcctgaagggcgagagtggcactgaggactgcctgtgggcgctggaaacactcttcagt
gttctgttttccatgtgcaggttgatggcccccttcacacccttcatcacagaaatgatg
taccaaaatctgcgtcacctcattgaccctgccgctgttgaagaaaaggactccaacagc
atccactatctcatgctgccacaagtcagggataatttgattgacaagcgcattgagagc
gccgtctctcagatgcagtctgtgattgagctgggaagagtgattagagatagaaagacc
cttcctgtcaagtatccattgaaggaggtggtagttatccaccaggatccagaggctcta
aaagacatccagtctttggagaaatacatcctcgaagaacttaatgtgcgacagttgaca
ctttcaacagacaagaacaagtatgggatccgtctgcgagccgagcctgaccacatggtg
ttgggcaagaaattaaagggggccttcaaggctgtgactgcttccatcaaggagctcccc
agcaaacagctagaggccttccagaaaacagggtccattgtggtggacggccatgagctc
catgaggaggacctgcggctgatgtacacttttgatcagacttctggttcagctgcacag
tatgaagctcactctgatgctcaggtgcttgtgctgttggacgtgaccccagaccagtcc
atggtagacgagggcgttgccagagaggtcatcaaccgcattcagaagctacgcaaaaag
gcacatttggtgccatcagatgagatatcggtgtactaccgctgccagccagagggggag
tacttgggatctgtgattgaggctcatactgacttcattctggcgaccaccaaggctccg
ctcctgcccttccctgtcccaaaaactgccagcgtcatcattgaggagaagactcagctg
aagggctcagacttggagttcacaatagtaaaaggatcttcgctctcacaaacgccacca
aacggaccagcttgtgcgtacgttaacctcagagtgaaagtcaacaacaaagaacaagag
ggcgtagtgttgctggagaatcccaaaggggataacagactagacttggacaaactgaag
aaagtgtgcagcagcatctttggaatcaataacaccccgctcagattcttcagcgatcaa
agcgaattgaccagcagagcggacctccaggcccacagtggcaaaactttgttagtgact
tcaggaccctcctctcctggcgccgtgcccaccgctgacaccctgctgtgtccctatgta
aacctgttactgtgcaacgcacagccggctgagtgccaggctggagatgttggcaccctc
ttgctggtgaacccagttggccagaatgagctcgaccactccggtctgctctctgaggct
gccaaggttttcggcctccgcagcagacgcctcaaactctacctggaccaggatctttcc
aatgaactgccagctgaatcatcggtaaaatctctccataccaaaactctctacgtgaga
gtttttccaaccaccgctgaagcatag
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integrated database retrieval system
