Gambusia affinis (western mosquitofish): 122835265
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Entry
122835265 CDS
T07758
Name
(RefSeq) sodium channel protein type 4 subunit alpha-like isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122835265
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122835265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
IQ_SCN5A_C
PKD_channel
Na_trans_assoc
GPHH
Motif
Other DBs
NCBI-GeneID:
122835265
NCBI-ProteinID:
XP_043980098
LinkDB
All DBs
Position
LG08:complement(19193381..19220868)
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AA seq
1651 aa
AA seq
DB search
MSWFEFWGSRLQRAEHLMKTQQLTPSQRNQLHGNHEVRMELRNQRMTSLLPPVGVEVFRR
FTPASLEEIQQEAVKNKKKPEKDQSKPASHLQAGEPLPFIYGDPSPELLSTPLEDLDPFY
QSQKTFIVICKERLIHRFDADPACYLLSPFNCLRSSAIKILLHPIFSVFFILTILTNCIL
MTMPHMSWTRDVEYVFMIIYIGELILKLLSRGISFGRFTFLRDPWNWLDVLNITASVIAM
SVGLREFAALKTISRVLKLFSYVPGLKKTAERLVQSLKWLAIAMVLMVFVLSILALIGMQ
FFMGVLKHKCVISSPSGKTDTQTTEQPEYFVTDNETINFYDNFVFEHYINKGENLFFMPG
QSDPMLCGNSSDSRRCPRGFTCIKTGRNPEYGFTSFDTFSWSLLAVVRIAMRDLLDVLLQ
LTLQAAGKAYMSAFVLIFFPGCFLVVSFFVAAVAMALVKQEKGEAAEAKKTEEEFSWIVK
VLKKREDSEQVTGETALLEEHDSPQKKKPAARTLDQENVTVEDTKDEVQPSCCSCADRIL
QGECCICSQWLKLKLRPFVLSQFFDLGIIVCIIVNTIFMAMDHHQMRLEFEETLSNSHIV
FTAIFTAELLLKVLALGIKGYFKVSWHIFDFIIVIFSLLELCLMYVKGLSLLRSVRLLRP
LRLGRWWSALGMLMKITWFSVGNLCVVLVFVVFMFAVVGTQLFQQNYEENACMSSSGCKL
PRWHMMDFSHSFLLVFRVLSGKWIECMWDCMKISNKGLCVIYYMAVMLIGNILVVNLFLY
LFLSPSCTNKPGAAGGQGPNKHHAGSWILESFRALTGKRSDANTDQKVESKNKDRQDNLA
LTPVSSGQPSLRHHSNDSIKDSSVVELSSCPGNNFKIQADTNNEEKKKNHGDVQELQDNK
NQTENSPGDCCCAICCNCCPIQDIETSRGAGRGWYKFRKACLLVVQHRLFENFIIFIILL
SSAALALEDTMLFHRPVLQMVLDKADQMFTFLFLMEMLLKWTAFGFKKYFSSFWCWLDFL
ILDVSLFSSVCVMLGYSAAYLRTLRALRTLRVPSRFKGMRVVLRVMAATAPPMCNSLLVV
LFVWLIFSILGVNLFAGRFAYCSNHTDGIISEVNNRTQCYELNDSSPADVYWKYPEFNFD
HVAMGLLSLLILATSADWKEIFYATVDSTEVDIQPVYESRPVMYLYFVLFIIFGCFFSAN
LFIRFFVDALHQLSNKAGGKHVFMTEEQLKFHSTVRKMFPKSPEKAAPRPTNRFQARLFD
LVTAPLFEILVVALICLNVVVMMMDSDDLSEQGQELLMWFLFIFIILYCIEFFLKITALR
RHYFSFGLNILDFVVFIFMVLGLFFTDLLERYFISPTAFFLLRLARISRVLPFCRLGRRI
QMLLTGFMMSLPALMNIGLLFLLVVYTYSFVGMRIFSMINFGTIGDSMISMILFSPSSTW
SLLVRNSMKYSPPTVMPLWSWANLSAGIVFFCSYVLLHLLLVVHLFIAVILESFNSREAE
EAVLLQMFYNTWRKFDPEASQVIQYSELSDFCDALQDPLRIPKPNNIRLVNMDLPLLPGD
QICCLDVLKALMTQTFGEESEMDSLKAQLEKKFTGNNTTQVSLEPISSTLQRKQEEVAAA
VIQRAFRKHQAQKGAPGQPEDKTTGVSASSQ
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggtttgagttttggggcagtaggctgcaacgagctgagcatctgatgaaaaca
cagcagctgaccccctcccagagaaaccagttacatggcaaccacgaagttcggatggag
ctacgaaaccagaggatgacatctttgctgccccctgttggtgtggaggtcttcaggcgc
tttacgccagcctccttggaagagatccaacaagaagctgtgaagaacaaaaagaaacca
gagaaagaccagagcaaaccagccagtcacctgcaggcgggggaacctctcccttttatt
tacggggacccgtccccagagcttctcagcacacctctggaagatctggatccgttctac
caatcacagaagaccttcatcgtcatctgtaaagagaggctcatccacaggtttgatgct
gatccagcctgttacctgctcagcccattcaactgtttgagatcctccgccatcaagatc
ctccttcaccctatattcagcgtcttcttcatcctgacgatcctgaccaactgtatttta
atgacaatgcctcacatgtcgtggaccagagacgtggagtatgtgttcatgattatctac
atcggtgagctcatcctgaagcttttgtcacgaggaatcagctttggacggttcaccttc
ctcagggatccctggaactggctggacgtcctcaacatcactgcatctgttatcgcgatg
tctgttggtttgagggagtttgctgctttgaaaacgatttctcgtgtgttgaagctcttc
agctacgtgccagggctgaagaagacagctgaaaggcttgtgcagtcgttgaagtggctg
gctatcgccatggtcctgatggtgttcgtcctgagtatcttagctctgattggcatgcag
ttcttcatgggtgtcctcaagcataaatgtgtcatttcttccccatcgggaaagacggac
acacagaccactgagcaacctgagtacttcgtcactgacaacgagacaattaatttctac
gacaactttgttttcgagcattatatcaacaaaggagaaaacctttttttcatgcctggt
cagtctgaccctatgctgtgtgggaactcctcagattctagacgctgtccaaggggtttc
acctgcataaagacagggaggaacccagagtacggatttaccagctttgacacgttcagt
tggtctctgctggctgtggtcagaatcgcaatgcgggaccttttggacgtcctgctgcag
ctgacattgcaagcagcaggtaaagcctatatgagtgcgtttgtgctcatcttcttccct
ggatgtttcctggtggtcagcttctttgtggcagcggttgccatggcgctggtgaagcag
gaaaagggtgaggctgctgaggccaaaaagacagaagaagagtttagctggattgtgaag
gtgctgaagaagagagaggacagtgagcaggtcactggtgagacggcgctcctggaagaa
catgactcaccacagaagaagaaaccagcagcaaggactctagatcaggagaacgtcact
gtggaagatactaaggatgaggtccagccttcctgctgctcctgcgctgacagaatcctg
cagggcgaatgctgcatctgctctcagtggctcaaactgaagctccgcccctttgtcctg
agtcagttctttgacctgggaattattgtttgcatcatcgtcaacactatcttcatggcc
atggaccatcatcaaatgaggctggaatttgaagagacgctgtccaattcgcatatagtc
ttcactgcgatcttcacagcagaacttctcctcaaagttctggctctgggcattaaaggc
tacttcaaggtgagctggcacatctttgacttcatcatcgtcatcttcagtctgctggaa
ctttgtcttatgtacgtcaagggtctgtctctgttgcgttcagtgagattgttgcgacca
ctgagattgggtcgttggtggtccgccttgggcatgctgatgaagattacctggttttca
gtgggaaacctctgtgtggttctggtcttcgtggtcttcatgtttgccgtagtcggcaca
caactctttcagcagaactatgaagaaaatgcctgcatgtcctcctccggctgcaagctt
ccacgctggcatatgatggacttttcccactccttcctgctcgtcttcagagtcctcagt
ggcaagtggattgagtgcatgtgggattgcatgaagatctccaacaagggcctttgtgtc
atctactacatggctgttatgctcatcgggaacatcctggtggtgaatttgtttctctat
ctgttcttgagcccatcctgtactaataaaccaggcgctgcaggaggacaaggacctaat
aaacatcatgctggatcctggatcctggagtctttcagggctctaacaggaaaaaggtcg
gatgctaacaccgatcagaaagttgagtcaaagaacaaagacagacaggacaatttggct
ttaacgcccgtcagctcgggccagccgtcactcagacatcacagtaatgactcaatcaaa
gactcgagcgtggtggaactcagcagctgtcctgggaacaactttaaaatccaagctgac
acaaacaatgaagagaagaagaagaatcatggtgatgtgcaagagcttcaggacaacaaa
aatcagacagaaaactcacctggagattgctgctgtgcaatttgttgcaactgctgtccg
atccaggatatagagacatccagaggagcagggagggggtggtataagttcaggaaggca
tgtctcctcgtcgtacaacacagattatttgaaaacttcatcatcttcatcatcctgctg
agcagcgctgctttggcattagaagacacaatgctgttccaccgtccagtcctgcagatg
gttctggacaaagcagaccagatgttcaccttcctgttcctgatggaaatgcttctcaaa
tggactgcttttggattcaagaaatacttcagcagcttttggtgctggctcgactttctc
atcttagacgtgtctctgttcagctcggtttgtgtcatgctgggatactccgctgcatac
ctgaggaccctgagggcactgaggaccttgagggtcccgtctcgcttcaaaggcatgagg
gtggtgcttcgggtcatggcggccactgcaccccccatgtgcaactctctgctggtcgtt
ctgtttgtctggctgatcttcagcatcctgggagtgaacttgtttgcaggaaggttcgct
tactgttccaaccacacagacggcataatctctgaagtgaataacaggacgcagtgttat
gagctcaatgacagcagccccgcagacgtctactggaagtaccctgagtttaactttgac
catgtggcgatgggtttactttcgctcctgatcctggccacatcagcagactggaaagaa
atcttctacgccacagtggactccacagaggtggacattcagcctgtatatgagtccaga
ccggtcatgtacctgtactttgtccttttcatcatctttggctgcttcttcagcgccaac
ctcttcatcaggttctttgtcgatgctctccatcagctgagcaacaaggctggaggtaaa
catgttttcatgacggaggagcagctgaagtttcacagcaccgtcagaaagatgttcccc
aagtcacctgagaaagctgctccacgcccaacgaaccggtttcaggctcggctcttcgac
ctggtgaccgctccgctgtttgagatcctggtggtggcgctgatctgtctgaacgtggtg
gtgatgatgatggattcagacgatctgtctgagcaaggacaggagcttttgatgtggttt
ttgttcatcttcataatcctctactgcatcgagttcttcctgaagatcactgctctcagg
cggcactacttcagcttcgggctgaacatcctggactttgtagtcttcatctttatggtc
ttaggcttgttcttcactgatttgttggagcgctattttatcagccccactgccttcttt
cttcttcggttggctcgcatcagcagagtcctcccattctgccgtttgggtagaaggata
cagatgctgctcaccggcttcatgatgtctcttcctgccctcatgaacatcgggctcctc
ttcctccttgtagtgtacacctattccttcgttgggatgcgtattttttccatgatcaac
tttgggacaatcggggacagcatgatcagtatgattctcttcagcccgtcctctacctgg
tcccttctggtgcggaatagcatgaaatattctccacccacagtcatgccactttggtcc
tgggccaacctatcggcaggcatcgtcttcttctgctcctacgtcctgctgcacctcctg
ctggtggtccacctcttcattgctgtcatcctggagagtttcaacagcagggaagctgaa
gaggctgttcttctgcagatgttttacaacacctggagaaagtttgatcctgaagcctca
caggtcatacagtacagtgagctgtcagatttttgcgacgcgctccaggatccgctgagg
attcctaagccaaataacatccggctggtcaacatggatctgcctctgctcccgggagac
cagatctgctgcctggatgtcctgaaagcactcatgactcagacatttggtgaagagagt
gaaatggactctcttaaagcccagctagagaagaaattcaccggcaacaatacaacacag
gtgtctcttgaaccaatcagcagcaccctgcagaggaaacaggaagaagtagcagcagca
gtgatccagagagcgttccggaagcaccaggcgcagaaaggagctccaggccagcctgag
gacaaaaccacaggcgtgtcggcgtcttcccaatga
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integrated database retrieval system
