Gambusia affinis (western mosquitofish): 122835481
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Entry
122835481 CDS
T07758
Symbol
nr1h4
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122835481 (nr1h4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gaf03310
]
122835481 (nr1h4)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122835481 (nr1h4)
Nuclear receptors [BR:
gaf03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
122835481 (nr1h4)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PBP_dimer
Motif
Other DBs
NCBI-GeneID:
122835481
NCBI-ProteinID:
XP_043980511
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Position
LG08:13247943..13263657
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AA seq
485 aa
AA seq
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MNEWEGPEINVVGPLQIPSSDEFSISESPHFFDILADQGSPLLQDPDILPFTTYPSMQYP
SLEPNMSATPYYSTQNYYPPFSGDEWYSHMGLYELRKGPLEGSYGTEMDEASSVMPAVCK
RNRHLNQPGRIKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKSGGNCE
MDMYMRRKCQECRLRKCKEMGMLAECLLTEIQCKSKRLRKNTKTSPGRSTGDETEGVDSA
DNKQVTSTTKLSKEKVAITKEQDALMKLIVEAYNKHQIPQDVTKKLLQEQYSTEENFLLL
TEIATSQVQVLVEFTKNIPGFLSLDHEDQIALLKGSAVEAMFLRSAQVFSRKMPKGHTEV
LEERIRKSGISEEFITPLFNFYKSVGELHMVLEEQALLTAITILTPDRPYVRDQQAVERL
QEPMVELLKKLCVLQHPQEPQYFARLLGRLTELRTLNHYHAEMLTSWRVNDHKFTPLLCE
IWDVQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtgggagggccccgagatcaatgtggtgggaccgctgcaaatcccatccagc
gatgagttctccatctctgagagcccccacttctttgacatactggcagatcaaggcagt
cctcttctgcaggaccctgacatcctaccgttcaccacttaccccagtatgcagtatcca
tccctggagccaaacatgtccgccactccatactactccactcagaactattaccctcca
ttcagtggagacgaatggtattcacacatgggcttatacgaactaaggaaaggacccctg
gagggcagttatgggacggaaatggacgaggcctcttctgttatgccggctgtttgcaag
aggaaccggcacctaaaccaacctggaaggatcaagggggaggaactgtgtgtggtctgt
ggggacaaggcctctggataccactacaacgctctcacctgtgaaggatgtaaaggcttc
ttcagacgaagcataacaaagaacgccgtgtacaaatgcaagagtggcggcaactgtgag
atggacatgtacatgcgcaggaaatgccaggagtgcaggctgagaaaatgcaaggagatg
ggcatgctggcagagtgtctgctgacagagatccagtgtaaatctaaaaggcttcgcaag
aacaccaagacctccccggggcggtcaacaggagacgagacagagggggtggacagtgca
gacaacaagcaggtcacctcaaccaccaagctgtcaaaggaaaaggtggcaattactaaa
gagcaagatgcactcatgaagctcatagtggaggcttacaacaaacatcaaatcccccag
gacgttaccaaaaagctgctacaagagcagtacagcacagaggaaaactttctcctcttg
accgaaatcgcaacaagtcaagttcaggttttggtggagtttacaaagaatattccaggg
tttctgtctctggatcatgaagatcagatcgctctgctgaagggttcggctgtggaggcc
atgtttctgcgttcagctcaagttttcagcaggaaaatgccaaaaggacacactgaggtt
ttagaagaaaggatacggaaaagtggtatatcagaagaattcatcacgcccttgtttaat
ttttacaaaagcgttggtgagctgcacatggtgctggaggaacaggctctcctcactgca
ataaccatcctgacaccagatcggccttatgtgagggaccagcaggctgtggagcggctg
caggagccgatggtggagctgctgaagaagctgtgtgttctgcagcatccgcaggagccg
cagtactttgctcgcctcctgggccgcctgacggagctgaggacgctcaaccattatcat
gcagagatgctgacgtcatggagagtgaacgaccacaaattcaccccgctgctctgtgag
atctgggatgtgcagtga
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