Gambusia affinis (western mosquitofish): 122836616
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Entry
122836616 CDS
T07758
Symbol
pcdh1g22
Name
(RefSeq) protocadherin 1 gamma 22
KO
K16497
protocadherin gamma subfamily C
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gaf04515
]
122836616 (pcdh1g22)
Cell adhesion molecules [BR:
gaf04515
]
Cadherins
Protocadherins
122836616 (pcdh1g22)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
BppU_N
Motif
Other DBs
NCBI-GeneID:
122836616
NCBI-ProteinID:
XP_043982265
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Position
LG09:14709627..14712384
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AA seq
825 aa
AA seq
DB search
MERTGRGMMWNKLSTWQVLLWWHNFFILWSTIDSQTRYSVPEELKQGSMVGNIAKDLGLL
VPELLRRKMRITSEAGKQYFKVDLGKGELLVTDRIDREELCGQRPSCLLPLELVIDDPLQ
VHRVEIEIQDTNDHSPSFPTKEKVVKIAELVNPGARFPLESATDPDVGANSVRTYLISKN
EHFKLTVKNLKDGRKIPELVLEKPLDRETQAVHNLVITAVDGGDPVRSGTSEITVIVLDN
NDNAPQFEKQVYEANVSERSEIGTEILQVKASDADEGLNGEIEYVFAEQTSDIILSLFDI
NPSTGVITVKGVLDHESNPLHRFDITAKDKGNPEMDGHCGVEIKINDINDNNPEIVVTSL
TTPVPEDSAIGTVIAIISTRDADSGDNGKVTLTLSNKSQFKLNPSISKHFSLVTNGPLDR
ETNSQYSVQITASDSGKPPLTSEKTIIVQLLDVNDNPPVFSQSLYTVYVKENNAPGMILC
SVLASDLDSGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQV
QAKDQGSPSLSSNATVHVFILDQNDNTPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVT
AVDADSGHNAWISYRLAEATDASLFTVNQYTGEVRTKRAVYEQDDSSQRLLIEIKDDGQP
VQSATATVSILLEDGLHEPILDLRHKMSEPSKKTGRITLYLILSLASVSVLSLVTFLVLA
VKCIRGSRSSGSCCMRRSDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFRSC
MSPMSEYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVS
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggagcggacgggacgtggaatgatgtggaacaaattgtcaacatggcaggtgcttctg
tggtggcataatttctttatcttgtggagtacaatagactcacagactcgctacagcgtt
cctgaggagctgaaacagggatccatggtgggaaatatagccaaagatttgggtttgctc
gtacctgaactgcttcggcgtaaaatgcggataacctcggaggctggtaagcagtatttt
aaagtagacttgggaaagggagagctgctggtgaccgacaggatagacagggaggaactg
tgtggacaaagaccgtcctgtttgctgcctttggaactggttatagatgacccgctgcag
gtgcacagagttgaaattgaaatacaggatacgaatgatcattcccctagttttcccact
aaagagaaagtggtgaaaatcgcagagttagtaaatccaggtgcgcggtttcctttagaa
agcgccactgatcctgatgtcggtgctaattctgtacgcacgtatctcattagcaaaaat
gagcattttaaattaacagttaaaaatcttaaagatgggagaaagattcctgaactggtg
cttgaaaagccccttgatcgagagacgcaggctgtacacaacctcgtcattacagctgtt
gatggaggagatccggtgcgttcagggacgtcggaaattacagtcatagtgctcgataac
aatgataatgcgccgcaatttgaaaaacaagtatatgaagctaatgtcagcgaaaggtct
gaaattggaaccgaaatcctgcaggttaaagcttcagatgcagatgaaggactgaatgga
gaaatagaatatgtgtttgcggagcaaacgtcagatataattttatccttgtttgacatc
aacccgtccactggggttattactgtcaaaggggttttagaccatgaatcaaatccttta
cacagattcgatataactgcaaaagacaaaggaaatccggaaatggacgggcattgtgga
gtggaaatcaaaataaatgacatcaatgacaataatccagaaatagttgttacctcttta
acaacgcccgttcccgaagactctgcaatcggaacagtcattgcaatcataagcacaaga
gacgcagattcaggtgacaatgggaaagtgacattaacgttgtcaaacaaatcccagttc
aaattaaacccatcgatctcaaaacatttttcactagtcacaaatggtccacttgaccgt
gaaacaaacagccagtatagtgttcagataaccgcctctgattctggaaaaccgccatta
acaagtgaaaaaacaataatagttcaacttttagatgtgaatgacaatcctccagttttc
tctcaaagtttgtacacagtttatgttaaagaaaacaatgctccagggatgattttgtgc
tcagtattagcatctgatctggattctggtgaaaacgcaaagatctcttactccatactg
gactctaaagtgcaggacgtctctgtctcgtcttatgtttacattaactcagataacggg
agcatctacagcatgcactcgtttgactatgagaagctgaaagtgtttcagattcaggtt
caggcaaaggaccagggctctccctctctcagcagcaacgccactgtccatgttttcatc
ctggaccagaacgataatacccccgctgttatttacccctcctccgctgccctgggctcc
ctctctcatcagaggatgccccgctccgctaaagcgggtcacctggttaccaaggtaaca
gcagtggacgctgattcgggtcataatgcctggatctcatacagactggcggaggccaca
gacgcctctctgttcaccgtcaatcagtacacaggagaggtgaggactaaacgcgctgtg
tacgagcaggacgactcctctcagaggctgctgatagagatcaaggacgacgggcaaccg
gttcagtccgccaccgccacggtgtccatcctactggaggacggtctccatgaacccatt
ttagacctccgacacaaaatgtccgagcccagcaagaaaactggcagaatcaccctttat
ttgattctgtctctggcctcagtgtccgtgctgtctctggtgacttttctcgtcctggcg
gtgaaatgtatcaggggcagcagaagcagcgggagctgctgcatgagaaggagcgactgt
gatgattacaagaaccccaacaggaacctgcagattcagctcaacactgatggacctata
aaatacgtggaggtcctgggaggagacatgatgtctcagagtcagtcgttcaggtcctgc
atgtctcccatgtcagagtacagtgatttcacattgatcaaacccagcagcaccacagac
tttaaagaagtcatcagtgttctggacgcgtctttacccgacagcacctggacctttgag
agccaacaggtgagctaa
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