Gambusia affinis (western mosquitofish): 122836685
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Entry
122836685 CDS
T07758
Symbol
kdm2ab
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122836685 (kdm2ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122836685 (kdm2ab)
04121 Ubiquitin system [BR:
gaf04121
]
122836685 (kdm2ab)
03036 Chromosome and associated proteins [BR:
gaf03036
]
122836685 (kdm2ab)
Enzymes [BR:
gaf01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
122836685 (kdm2ab)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
122836685 (kdm2ab)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122836685 (kdm2ab)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
122836685 (kdm2ab)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
122836685 (kdm2ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
F-box
Cupin_8
LRR_6
DUF7885
C1_1
LRR_8
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
122836685
NCBI-ProteinID:
XP_043982372
LinkDB
All DBs
Position
LG09:15616493..15634416
Genome browser
AA seq
1301 aa
AA seq
DB search
MDDPHTRYSKRLRTAPRRQYQDDGISDDEIEGKRTFDLDEKLQCERFGSDLVKHMEGKDF
TYEYIQREGLRDPIIFKTTDGLGIQMPDPDFSVSDVKLFVGSRRIVDVMDVNTQKGIEMS
MAQWRRYYETPPSEREKLYNVISLEFSHTRLENLVKRPASVDLIDWVDNMWPRHLKERQR
DSTNAIIDMHYPKVQKYCLMSVQGCFTDFHIDFGGTSVWYHILRGAKVFWLIPPTPQNLD
MYENWVLSGKQGDIFLGDKCYDCQRIELQQGNTFIIPSGWIHAVYTPEDTLVFGGNFLHS
FNIPMQLNIYNIEDRTRVPAKFRYPFYYEMCWYVIERYLFCLTNVSHLTPEFQKYSLGIG
LTRADVGNNDPPINGTNGVDGEGEEKPTAEEVKEEEGDEELENKVGSTRPVLTPFELEGL
WNLLGKLEELPAHKKCVPAGIRNAAALLEDMRAVLRECAGDDIKLSCTGEPIIRWPERPS
WYQPPTPPAPVIYRPRLGPSLHKSKRSTKHTSISALRRRRVRCKRCSACCRKECGDCQYC
HDMRKFGGPGRMKKSCVMRQCLMPALPNTARCAVCGEGEFDESDPSTYSLMECTACSQIV
HRQCVKEPGEGKINKDLPSCWECPKCYQGNDSDSESSSEEESEDSEGSTFMPQSKRSYQD
DVCEEGPSRGKRSRLHGRQTAPPPSQKLLLQHQQRRKRESALEHRLKKRIKMERSKLLRK
QSSLDRSPRFLSSRMLSRLHSPVSRVSQGQIRGSAWATGSSHSSILGGNGSFGQQKSSHG
LVLHPKGEPRRGHGRGVRLRGGGAGRGIRGGGRHHEPEEDSEDSSSSSSSTNSSSSEEEE
ESGLNNGRVGDKENRPQLRQGHPATEQGECGSGLGNQNGGEKDDEEEETEYDIPKGDKDG
SFIKVMLQKPPRAKQDSSAIVPKLEAVTPQTAASAAANQSKALHRPPIRNRGPCPDRNTN
RVTPPRTRSRHTDSRSSNPDRLEASKQTRSTRPAKLSNGASSSSSSELHHLRVPLSALQE
GGGEADRESCGGGPSCEREVWVSVFRYLNRTDLCVCMAVCKNWYKWCLDKRLWARIDLSI
KRTVTPQALTGIIKRQPVTLDLSWTNISKKQLNWLIGRLPGLKDLMLSGCSWSSISALCS
TGCPLLRSLDLRNAYGVKDAQIRDLVIPPGCDNRSQLRNMQCLRLAGLDIGDPTLRLVIR
HMPHLTKLDLSHCNSLTDHSINLLTAVGSSTRNTLTELNLGGCSKLTDACLKYLRRLSCI
SLLDLRGCKGVSRKACEAFISELSVNTLYCLSDEKLIQRIS
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcctcacacacggtacagcaaacgactgcggacggctccgcgaaggcagtac
caagatgatggaatctcagacgatgagatcgaagggaaacgaacctttgacctggatgag
aagctgcagtgtgagaggtttggcagtgatctggtcaaacacatggagggtaaagatttt
acatacgaatatatacagagagaagggctcagggaccccattatttttaagacaaccgat
gggcttggtatacaaatgccagacccagatttcagtgtgagtgatgtcaagttatttgtt
ggcagtcgacggattgtagatgttatggacgtgaatacccaaaagggaattgagatgtct
atggctcagtggcgacgctactatgagacgccaccatcggaaagagagaaactctacaat
gtgatcagcctggagttcagccacaccaggctggagaacctggtcaaacgaccagcatca
gtggaccttattgactgggtggacaacatgtggcctcgtcacctgaaggagagacagaga
gactccactaatgccattatagacatgcattatcccaaagtacagaagtactgtctcatg
agtgtgcagggctgcttcacagacttccacattgactttggtggaacttcagtctggtac
cacattctgcgaggggcaaaggtgttttggttgattccaccaacgcctcagaacctggac
atgtatgagaactgggttttatcgggaaagcagggggacatcttcttgggagacaagtgc
tacgactgccagaggatagagctccagcagggcaacaccttcataatcccatcaggatgg
atccatgctgtgtacactccagaagatactttagtgtttgggggaaactttctccacagc
tttaacatccccatgcagctcaacatctacaatattgaagaccgcacacgggtgccagca
aagttccggtacccattttactatgagatgtgctggtacgtcatagagagatacctcttc
tgtctgaccaacgtctcccacctcaccccggagttccagaaatattcgctgggcattgga
ctgactcgagcagatgtcggaaataacgatccccccattaatggcaccaatggggttgac
ggtgagggtgaagaaaagccgacggcagaagaggtcaaggaagaggagggtgatgaagag
cttgaaaacaaagtaggatcaactcgacctgtgctgacgcctttcgaactggagggactg
tggaacctcttagggaagctggaggagctgccggctcataaaaagtgcgtccctgcagga
atccgaaatgctgcagcgctgctggaggacatgagggctgttctaagggagtgtgccggt
gacgacatcaaactgtcctgcactggagagccaattatcaggtggcctgaaaggccgtca
tggtaccagccccccacacctccagcacctgttatttatcgtccccgcctgggtccgtct
ctgcacaaatctaagcggtctaccaaacacacttccatttcggcgctgcggcgcaggcgg
gtgagatgcaagcgatgctccgcctgctgcaggaaggagtgtggagactgccagtactgt
cacgacatgagaaaatttggtggtcctggacgaatgaaaaagagctgcgttatgaggcaa
tgtctaatgcctgccttgccaaacacagcccgatgtgccgtttgtggagaaggagagttt
gacgaatcagatcccagcacttactctttaatggagtgcactgcctgttcgcagatcgta
catcgtcagtgtgttaaggaacccggtgaggggaagatcaataaggacctgcccagctgc
tgggagtgtcccaaatgttaccaagggaatgactctgactcagagtcttccagtgaggag
gagagtgaggactcagagggctccacattcatgccacagtctaaacgttcgtatcaggac
gacgtttgtgaggaaggtccgagtcgagggaagcgaagtcgactgcacggccgacaaacg
gcgccgcctccctcccagaaactactgctgcagcatcaacagaggcgcaaacgagagagt
gcactggagcacagacttaagaaaaggataaaaatggagaggagcaaacttttaagaaaa
cagtcgtctttagatcgctctccccggttcctgagctccaggatgctttctcgcttgcac
tctccagtcagcagagtctctcagggccaaatccggggctccgcttgggcaactggttcg
tctcacagcagcattctgggaggcaatggatcgtttgggcagcagaagtcctcccacggc
ctggtgcttcatcccaaaggagagccccgcagggggcacggaagaggtgtgaggctgcga
ggaggaggagcgggacgcggcatcagaggtggagggagacaccatgagccagaggaggac
agcgaggacagcagcagcagcagcagcagcaccaacagcagcagcagcgaggaagaggag
gagagcgggctgaacaacgggagggtgggggataaggagaacaggccacagttgaggcaa
gggcaccctgccacagaacagggtgagtgtggaagtggactgggcaaccaaaacggagga
gaaaaggacgacgaagaggaggagacggaatacgacattccaaaaggggacaaagatggc
tcgtttattaaagtgatgcttcaaaagccgcccagagcaaaacaggactcctcagctatc
gtcccgaaattagaggccgtcaccccccaaactgcagcttctgcagcagccaaccagagc
aaagccctccacagaccccccatcagaaatcgagggccttgtccggaccgaaacacaaac
cgggtgacgccgccgcgcactcggagtagacacacagactctcgttcttccaacccagac
agactggaagcatcgaaacaaacgagatcaaccagaccagctaaacttagtaatggggct
tcctcctcttcatcgtctgagcttcatcatctcagagtccccctctccgccctgcaggaa
ggagggggggaagcggacagggagagctgcgggggcggtccgagctgtgagagggaggtc
tgggtctccgtctttcgctacttaaaccgaacggatctgtgtgtctgcatggcggtctgc
aagaattggtacaaatggtgtttagataaaaggctttgggcccgaattgacctgagcatc
aagcgcacagtgacccctcaggccctcacaggcatcataaagagacaacccgtcacactg
gacctctcctggacgaacatctccaaaaaacagctcaactggctcattggccgcctgcct
ggactaaaggatttgatgctgtccggttgttcctggtcgtcgatttcagctctctgctcc
actggctgtcctctccttcgctctctggacctgcgaaacgcatacggcgtcaaagacgca
cagatcagggatttggtcatacctccaggctgtgacaaccgcagccagctgaggaacatg
cagtgcttgcggcttgcaggtctggacatcggcgaccccaccctgcggctggtgatccgc
cacatgccccatttaactaaactggatctgtcccactgcaacagcctcaccgaccactcc
atcaacctgctgaccgcggtcggctcgtccacccggaacacgctgaccgagctcaaccta
ggaggctgcagcaaactgacagacgcgtgtttgaagtatctgcgccgcctgtcatgcatc
tctctgctcgacctgcgaggctgcaaaggagtttccagaaaggcctgcgaggcctttatc
tctgagctgtcagtcaacacactctactgcctatcagatgagaaactgatccagcggata
tcctag
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integrated database retrieval system
