Gambusia affinis (western mosquitofish): 122839426
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Entry
122839426 CDS
T07758
Symbol
nr1i2
Name
(RefSeq) nuclear receptor subfamily 1 group I member 2 isoform X1
KO
K08540
pregnane X receptor
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122839426 (nr1i2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gaf03310
]
122839426 (nr1i2)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122839426 (nr1i2)
Nuclear receptors [BR:
gaf03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
122839426 (nr1i2)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
122839426
NCBI-ProteinID:
XP_043986909
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Position
LG11:12868766..12884690
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AA seq
443 aa
AA seq
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MSREAAEIHFVYEALDEPHEEDEEEKEMTEDEEPKACGVCGDLAKGYHFNALTCEGCKGF
FRRAIKRSTQLRCPFLNKCIITKNNRRSCQACRFRKCQAIGMRKDMVMSEEAVLERRIKI
KKKKMCNTTAELSTQQEQVVEELLCGLRSTFDSTFSRFTGFRPMDRDVLMENQQSRPQTS
SLTKSWCAAEEHGDDPSKSPYPCSLSSTSSPSLSSSSTRFFLPGSFEKGEDNVGDENSSV
YTNLPHLADLTTYMIQDIIRFSKSLQDFRSLSIEDQISLLKGATFEIMQIRFNMVFNTTT
SNWECGCITYCIHDALRGGFQPLLLEPLFKFHHNLRKLDLQEEEYALIQAISLFSPDRPG
VQHPAAIDRVQENLAETLKTWIDCKKKGPKKHLLYPKMIACLTEMRTMTEEYSKQILQIQ
DVQPDTISPLIMEVVSKNPCNNV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagcagggaggctgctgaaatccattttgtctatgaagctctcgatgagccacatgag
gaggacgaggaggaaaaggagatgacagaagatgaggagcccaaagcctgcggcgtgtgc
ggcgatctggcgaagggttaccacttcaacgctctgacatgtgaaggctgtaaaggcttc
tttagacgtgccataaagcggtcaacgcagctccgatgtccgttcctgaataaatgcatc
atcaccaaaaacaaccgccgctcgtgtcaggcctgccgcttcagaaaatgccaggccatc
gggatgcggaaagacatggtcatgtcggaggaagcggtcttggagcgaagaatcaaaata
aagaagaaaaagatgtgcaacacgacggcagagctttcgacccaacaggaacaggtggtt
gaggagctgctctgtggcctccgcagcacatttgactcaacattttcacgcttcactggc
tttaggcccatggacagagatgtgttgatggagaaccagcagtccagaccccagaccagc
agcctgacgaagagctggtgtgcagctgaagaacatggagatgatccttcaaagtcccct
tacccctgctccctttcctccacctcctccccgtctctctcgtcctcttccacccgcttc
ttcctccccggttcctttgaaaaaggcgaggacaacgttggagatgaaaacagcagcgtt
tacactaacctcccgcatctggctgacctcacgacctacatgatccaggacatcatccgc
ttttccaaaagccttcaggacttccggtcactaagcattgaggaccagatatctctcctg
aagggagccacgtttgaaataatgcagattcgcttcaacatggtgttcaacactacgacg
agcaactgggaatgtggctgtattacatactgcatacacgacgcactgcgaggaggtttc
cagccgctcctgcttgagcccctcttcaaattccaccacaatctgcgcaaactggacctg
caggaggaggagtacgccctcatccaggccatatcgctgttttctccagatcgtcctgga
gtgcagcatcccgccgccatcgatagagttcaagaaaacttggcagaaactctgaaaacc
tggatcgactgcaagaaaaaaggccccaaaaaacacctgctgtatcccaaaatgatagcc
tgcctcacggagatgagaacgatgacggaggagtacagcaagcagattctgcagatccaa
gacgtgcagcctgacaccatctctccactcatcatggaggtggtcagtaaaaacccctgc
aacaacgtctga
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