Gambusia affinis (western mosquitofish): 122839682
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Entry
122839682 CDS
T07758
Symbol
rapgef4a
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04081
Hormone signaling
gaf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
122839682 (rapgef4a)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
122839682 (rapgef4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122839682 (rapgef4a)
Membrane trafficking [BR:
gaf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
122839682 (rapgef4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
Motif
Other DBs
NCBI-GeneID:
122839682
NCBI-ProteinID:
XP_043987441
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All DBs
Position
LG11:15407134..15440635
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AA seq
1022 aa
AA seq
DB search
MVAAHTSSHSSESAEWIICLDKRPAERSGEDVDIILARLKNVKALERFHPCLLQQICLCG
FYECLEKGITLFRQGDIGTSWYAVLSGSLDVKVSETSSSQDAVTICTLGTGTAFGESILD
NTPRHATIVTREFSELLRIEQKEFRSLWEKYHPCMAGLLAPPYGVMESTGSDRMPEKENI
SSNSFVSVSKHLNKKSFPESPAKLHTKSPTQVPSERILRVGKILRHAILSRAPHMIRDRK
YHLKTYRQCCVGTELVDWQMLQSSCVQSRIQAVGMWQVLLEEGVLKHVDGETVFQDKYLF
YRFLDDEQEDVLRPSEEEKRESQEELQDTLLFLSQIGPDALMRMILRKPPSERTPDDLEI
IYEELLHIKALSHLSTTVKRELAGVLIFESHERAGTVLFHQGEEGTSWYIIFKGSVNVVI
YGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDDCHFLRVDKEDFNRILRDLEANTVR
LKEHGQDVLVLEKSLSSSRNSVQGSSAAHHKYNIMSGTPEKILEHLLEMMRLDSQFTESD
SALDDFALTHCVFIPNSQLCPVLSDHYHAQASQGSEMEKLDYTLNNKRRVIRLVMKWAAV
HGEHLQQQDVVFLEEFLVAVSEDAKVLPALRDHLTELEKIIKSSADDARSSQRKHKVLLQ
HFNMVDEKLQKRQPINGDDEILFKVYCCDHTYITIRVPVASSVREVLEAVADKLGSAEDL
ILVGLSSAGEKVVFKPNDVSIFSTLSINGRLFACQRAQLDMLMPLSEQEGPSLGSLANFE
LMSSKDVAYHMTFYDWELFHCVHELELIYHTFGRQHVKKTTVNLDLFLQRFNEIQFWVIT
EVCLCSQLNKRVQLLKKFIKIAAHCKDYKNLNAFFAVIMGLSHPAVSRLSQTWEKLPSKF
KKFYGEFENLMDPSRNHRAYRLTVAKLDPPIIPFMPLMIKDMTFTHEGNKTFIDNLVNFE
KMRMMAKTVKTVRYCRSQTFSPDSPQAGKHHPDVWTYVRQLSVIDNQRTLTQLSHGLEPR
RS
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggtagcagcgcacacgtcctctcattcgtcggaatctgccgagtggattatttgtctg
gataaaagaccagcagagcgctcgggtgaagatgtcgacataatcctggctcgtctgaaa
aatgtgaaggctttggagagattccacccctgtttgctgcagcagatttgtttgtgtggg
ttctacgaatgcttggaaaaagggataacattgtttcgacagggagacattggtacaagt
tggtatgctgtcctttccggttccctggatgtgaaagtgtctgaaacatcaagctctcaa
gatgctgtcactatttgcacgctggggaccggcacagcgttcggagagtcgatcctggat
aacacgcccagacatgctacgattgtcactcgggaattcagtgagcttctacgcatcgaa
caaaaggagttcaggtctctctgggagaaatatcacccctgcatggctggacttctcgct
ccaccgtatggcgtgatggagagcactggatctgacagaatgccagaaaaggaaaacata
agcagcaattcatttgtctcagtgtccaaacatctaaataagaagtcctttcctgaaagt
ccagccaaacttcatactaaaagtccaactcaggttccctctgagaggatcttgcgagtg
gggaagattctccgccatgccatcctatccagagcgcctcacatgattcgagacagaaag
tatcatctcaaaacatacaggcagtgctgtgtggggacagagttggtggactggcagatg
ctgcagagctcctgcgtccagtcccgcattcaggctgtgggcatgtggcaggtgctgctg
gaggaaggtgtcctcaagcacgtggatggagagacggtcttccaggacaagtaccttttc
taccgcttcctggacgatgagcaggaggacgttttgagacccagtgaggaggagaaaagg
gagagccaggaggagctgcaagacactctgctcttcctgtcgcagattggaccagatgct
cttatgaggatgatcctgaggaaaccgccgtctgaaagaacgccagacgacttggagata
atttatgaagaactgctccatataaaggccttatctcacctgtccaccactgtaaagagg
gaactagcaggagttctcatctttgaatcccatgaaagagcaggaacagtcttgttccac
caaggagaagagggcacatcctggtacattatatttaaaggctcggtgaatgttgtcatc
tatggaaaaggtgttgtctgcacactccatgaaggagacgactttgggaagctggcgctt
gtcaatgacgcccccagagctgcctccattgtccttcgagaggacgactgtcatttcctg
agagtggacaaggaggacttcaacaggattttgagggacctggaggccaacacagtgcgt
ctgaaggagcacggccaagatgttctggtgttggagaagagtctcagcagcagccggaac
tctgtccagggatcctctgcagctcaccacaaatacaacatcatgtccgggacgccggag
aagattttggagcaccttcttgaaatgatgcgattggattcccagttcactgagtcagat
tcggccttagatgattttgcgctcacacactgcgtcttcatcccgaacagtcagctatgt
cctgtgcttagcgaccactaccacgcccaggcctcacaaggctcagagatggagaagctg
gactacacgctcaacaacaagcgccgggtgatccgcctggtgatgaaatgggctgctgtg
catggagaacacctgcagcagcaggacgtggtcttccttgaggagtttctcgtggctgtt
tcagaagatgccaaagtgcttccagccctcagggatcacctgacagagctggaaaaaatc
ataaaaagcagtgcagacgatgccagatcctcgcagagaaagcacaaagtccttctgcag
catttcaatatggtagatgagaaacttcagaaacgtcagcccatcaatggagatgatgaa
atcctgttcaaagtctactgctgtgaccacacctacatcaccatccgggtcccagtagcc
tcctcagtcagggaggtcctggaggctgtggccgacaagctggggtcagcggaggatctg
atcctggtcggcctcagttcagctggagagaaagttgtcttcaaaccaaacgatgtctcc
atcttctccacactcagcataaatggacgactctttgcctgccagagggcccagctggat
atgttgatgcctctgtctgaacaggagggtccgtctcttgggtctcttgccaattttgag
ttgatgagctctaaggatgtggcttaccacatgaccttctacgactgggagcttttccat
tgtgtacatgagcttgaactcatctatcacacgtttgggaggcagcacgtcaagaaaacc
acagtgaatctggatctcttcctccagagatttaatgaaattcagttctgggtaattaca
gaggtttgtctgtgttcccagctgaacaagagagttcagctcctcaagaagtttatcaag
atcgctgctcactgtaaagactacaagaatctaaatgccttctttgccgtcattatggga
ctgagtcatccagcagtgagcagactcagtcagacatgggagaaacttcccagcaagttt
aagaagttttatggagaatttgaaaacctaatggatccgtccaggaatcaccgggcgtat
cgactcacagttgccaaactggacccgcccattattcccttcatgccactcatgataaaa
gacatgacattcactcacgagggcaacaaaacatttatcgacaatttggtcaattttgag
aaaatgcggatgatggctaagacagtgaagacagtgagatattgtaggagccaaacattc
agcccggattcccctcaggctgggaagcatcaccccgatgtttggacctacgttcgtcag
ctcagcgtgatcgacaaccaaaggaccctaactcagctctctcatggacttgagccccgc
aggtcttga
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